data_1FNP # _model_server_result.job_id YVKXeS7EnHSBqC4iqWEyDg _model_server_result.datetime_utc '2024-11-26 15:24:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fnp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":706}' # _entry.id 1FNP # _exptl.entry_id 1FNP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.402 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LAURYL DIMETHYLAMINE-N-OXIDE' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1FNP _cell.length_a 141.748 _cell.length_b 141.748 _cell.length_c 187.415 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FNP _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 H N N ? 7 P N N ? 7 Q N N ? 7 R N N ? 7 S N N ? 7 T N N ? 7 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 153 L HIS 153 1_555 E MG BCL . L BCL 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc2 A NE2 HIS 173 L HIS 173 1_555 D MG BCL . L BCL 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc3 A NE2 HIS 190 L HIS 190 1_555 I FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc4 A NE2 HIS 230 L HIS 230 1_555 I FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc5 B NE2 HIS 182 M HIS 181 1_555 K MG BCL . M BCL 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc6 B NE2 HIS 202 M HIS 201 1_555 L MG BCL . M BCL 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc7 B NE2 HIS 219 M HIS 218 1_555 I FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc8 B OE1 GLU 234 M GLU 233 1_555 I FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc9 B OE2 GLU 234 M GLU 233 1_555 I FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc10 B NE2 HIS 266 M HIS 265 1_555 I FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? # _chem_comp.formula 'C14 H31 N O' _chem_comp.formula_weight 229.402 _chem_comp.id LDA _chem_comp.mon_nstd_flag . _chem_comp.name 'LAURYL DIMETHYLAMINE-N-OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 O1 LDA sing 467 n n N1 CM1 LDA sing 468 n n N1 CM2 LDA sing 469 n n N1 C1 LDA sing 470 n n CM1 HM11 LDA sing 471 n n CM1 HM12 LDA sing 472 n n CM1 HM13 LDA sing 473 n n CM2 HM21 LDA sing 474 n n CM2 HM22 LDA sing 475 n n CM2 HM23 LDA sing 476 n n C1 C2 LDA sing 477 n n C1 H11 LDA sing 478 n n C1 H12 LDA sing 479 n n C2 C3 LDA sing 480 n n C2 H21 LDA sing 481 n n C2 H22 LDA sing 482 n n C3 C4 LDA sing 483 n n C3 H31 LDA sing 484 n n C3 H32 LDA sing 485 n n C4 C5 LDA sing 486 n n C4 H41 LDA sing 487 n n C4 H42 LDA sing 488 n n C5 C6 LDA sing 489 n n C5 H51 LDA sing 490 n n C5 H52 LDA sing 491 n n C6 C7 LDA sing 492 n n C6 H61 LDA sing 493 n n C6 H62 LDA sing 494 n n C7 C8 LDA sing 495 n n C7 H71 LDA sing 496 n n C7 H72 LDA sing 497 n n C8 C9 LDA sing 498 n n C8 H81 LDA sing 499 n n C8 H82 LDA sing 500 n n C9 C10 LDA sing 501 n n C9 H91 LDA sing 502 n n C9 H92 LDA sing 503 n n C10 C11 LDA sing 504 n n C10 H101 LDA sing 505 n n C10 H102 LDA sing 506 n n C11 C12 LDA sing 507 n n C11 H111 LDA sing 508 n n C11 H112 LDA sing 509 n n C12 H121 LDA sing 510 n n C12 H122 LDA sing 511 n n C12 H123 LDA sing 512 n n # _atom_sites.entry_id 1FNP _atom_sites.fract_transf_matrix[1][1] 0.007055 _atom_sites.fract_transf_matrix[1][2] 0.004073 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008146 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005336 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BCL L 1 302 302 BCL BCL . E 4 BCL L 1 304 304 BCL BCL . F 5 BPH L 1 402 402 BPH BPH . G 6 U10 L 1 502 502 U10 U10 . H 7 LDA L 1 705 705 LDA LDA . I 8 FE M 1 500 500 FE FE . J 9 PO4 M 1 800 800 PO4 PO4 . K 4 BCL M 1 801 301 BCL BCL . L 4 BCL M 1 802 303 BCL BCL . M 5 BPH M 1 401 401 BPH BPH . N 6 U10 M 1 501 501 U10 U10 . O 10 SPO M 1 600 600 SPO SPO . P 7 LDA M 1 701 701 LDA LDA . Q 7 LDA M 1 703 703 LDA LDA . R 7 LDA M 1 704 704 LDA LDA . S 7 LDA M 1 707 707 LDA LDA . T 7 LDA H 1 702 702 LDA LDA . U 7 LDA H 1 706 706 LDA LDA . V 11 HOH L 1 706 1 HOH HOH . V 11 HOH L 2 707 2 HOH HOH . V 11 HOH L 3 708 6 HOH HOH . V 11 HOH L 4 709 7 HOH HOH . V 11 HOH L 5 710 11 HOH HOH . V 11 HOH L 6 711 14 HOH HOH . V 11 HOH L 7 712 19 HOH HOH . V 11 HOH L 8 713 21 HOH HOH . V 11 HOH L 9 714 24 HOH HOH . V 11 HOH L 10 715 29 HOH HOH . V 11 HOH L 11 716 30 HOH HOH . V 11 HOH L 12 717 36 HOH HOH . V 11 HOH L 13 718 41 HOH HOH . V 11 HOH L 14 719 52 HOH HOH . V 11 HOH L 15 720 56 HOH HOH . V 11 HOH L 16 721 67 HOH HOH . V 11 HOH L 17 722 69 HOH HOH . V 11 HOH L 18 723 72 HOH HOH . V 11 HOH L 19 724 77 HOH HOH . V 11 HOH L 20 725 78 HOH HOH . V 11 HOH L 21 726 80 HOH HOH . V 11 HOH L 22 727 83 HOH HOH . V 11 HOH L 23 728 85 HOH HOH . V 11 HOH L 24 729 89 HOH HOH . V 11 HOH L 25 730 91 HOH HOH . V 11 HOH L 26 731 95 HOH HOH . V 11 HOH L 27 732 96 HOH HOH . V 11 HOH L 28 733 98 HOH HOH . V 11 HOH L 29 734 100 HOH HOH . V 11 HOH L 30 735 103 HOH HOH . V 11 HOH L 31 736 109 HOH HOH . V 11 HOH L 32 737 110 HOH HOH . V 11 HOH L 33 738 118 HOH HOH . V 11 HOH L 34 739 122 HOH HOH . V 11 HOH L 35 740 123 HOH HOH . V 11 HOH L 36 741 129 HOH HOH . V 11 HOH L 37 742 132 HOH HOH . V 11 HOH L 38 743 140 HOH HOH . W 11 HOH M 1 803 9 HOH HOH . W 11 HOH M 2 804 12 HOH HOH . W 11 HOH M 3 805 13 HOH HOH . W 11 HOH M 4 806 15 HOH HOH . W 11 HOH M 5 807 17 HOH HOH . W 11 HOH M 6 808 18 HOH HOH . W 11 HOH M 7 809 22 HOH HOH . W 11 HOH M 8 810 23 HOH HOH . W 11 HOH M 9 811 27 HOH HOH . W 11 HOH M 10 812 28 HOH HOH . W 11 HOH M 11 813 32 HOH HOH . W 11 HOH M 12 814 34 HOH HOH . W 11 HOH M 13 815 39 HOH HOH . W 11 HOH M 14 816 43 HOH HOH . W 11 HOH M 15 817 44 HOH HOH . W 11 HOH M 16 818 50 HOH HOH . W 11 HOH M 17 819 54 HOH HOH . W 11 HOH M 18 820 62 HOH HOH . W 11 HOH M 19 821 65 HOH HOH . W 11 HOH M 20 822 68 HOH HOH . W 11 HOH M 21 823 70 HOH HOH . W 11 HOH M 22 824 71 HOH HOH . W 11 HOH M 23 825 74 HOH HOH . W 11 HOH M 24 826 75 HOH HOH . W 11 HOH M 25 827 84 HOH HOH . W 11 HOH M 26 828 86 HOH HOH . W 11 HOH M 27 829 87 HOH HOH . W 11 HOH M 28 830 88 HOH HOH . W 11 HOH M 29 831 90 HOH HOH . W 11 HOH M 30 832 94 HOH HOH . W 11 HOH M 31 833 106 HOH HOH . W 11 HOH M 32 834 107 HOH HOH . W 11 HOH M 33 835 111 HOH HOH . W 11 HOH M 34 836 113 HOH HOH . W 11 HOH M 35 837 116 HOH HOH . W 11 HOH M 36 838 121 HOH HOH . W 11 HOH M 37 839 133 HOH HOH . W 11 HOH M 38 840 134 HOH HOH . W 11 HOH M 39 841 138 HOH HOH . X 11 HOH H 1 707 3 HOH HOH . X 11 HOH H 2 708 4 HOH HOH . X 11 HOH H 3 709 5 HOH HOH . X 11 HOH H 4 710 8 HOH HOH . X 11 HOH H 5 711 10 HOH HOH . X 11 HOH H 6 712 16 HOH HOH . X 11 HOH H 7 713 20 HOH HOH . X 11 HOH H 8 714 25 HOH HOH . X 11 HOH H 9 715 26 HOH HOH . X 11 HOH H 10 716 31 HOH HOH . X 11 HOH H 11 717 33 HOH HOH . X 11 HOH H 12 718 35 HOH HOH . X 11 HOH H 13 719 37 HOH HOH . X 11 HOH H 14 720 38 HOH HOH . X 11 HOH H 15 721 40 HOH HOH . X 11 HOH H 16 722 42 HOH HOH . X 11 HOH H 17 723 45 HOH HOH . X 11 HOH H 18 724 46 HOH HOH . X 11 HOH H 19 725 47 HOH HOH . X 11 HOH H 20 726 48 HOH HOH . X 11 HOH H 21 727 49 HOH HOH . X 11 HOH H 22 728 51 HOH HOH . X 11 HOH H 23 729 53 HOH HOH . X 11 HOH H 24 730 55 HOH HOH . X 11 HOH H 25 731 57 HOH HOH . X 11 HOH H 26 732 58 HOH HOH . X 11 HOH H 27 733 59 HOH HOH . X 11 HOH H 28 734 60 HOH HOH . X 11 HOH H 29 735 61 HOH HOH . X 11 HOH H 30 736 63 HOH HOH . X 11 HOH H 31 737 64 HOH HOH . X 11 HOH H 32 738 66 HOH HOH . X 11 HOH H 33 739 73 HOH HOH . X 11 HOH H 34 740 76 HOH HOH . X 11 HOH H 35 741 79 HOH HOH . X 11 HOH H 36 742 81 HOH HOH . X 11 HOH H 37 743 82 HOH HOH . X 11 HOH H 38 744 92 HOH HOH . X 11 HOH H 39 745 93 HOH HOH . X 11 HOH H 40 746 97 HOH HOH . X 11 HOH H 41 747 99 HOH HOH . X 11 HOH H 42 748 101 HOH HOH . X 11 HOH H 43 749 102 HOH HOH . X 11 HOH H 44 750 104 HOH HOH . X 11 HOH H 45 751 105 HOH HOH . X 11 HOH H 46 752 108 HOH HOH . X 11 HOH H 47 753 112 HOH HOH . X 11 HOH H 48 754 114 HOH HOH . X 11 HOH H 49 755 115 HOH HOH . X 11 HOH H 50 756 117 HOH HOH . X 11 HOH H 51 757 119 HOH HOH . X 11 HOH H 52 758 120 HOH HOH . X 11 HOH H 53 759 124 HOH HOH . X 11 HOH H 54 760 125 HOH HOH . X 11 HOH H 55 761 126 HOH HOH . X 11 HOH H 56 762 127 HOH HOH . X 11 HOH H 57 763 128 HOH HOH . X 11 HOH H 58 764 130 HOH HOH . X 11 HOH H 59 765 131 HOH HOH . X 11 HOH H 60 766 135 HOH HOH . X 11 HOH H 61 767 136 HOH HOH . X 11 HOH H 62 768 137 HOH HOH . X 11 HOH H 63 769 139 HOH HOH . X 11 HOH H 64 770 141 HOH HOH . X 11 HOH H 65 771 142 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LDA . . . U 7 35.625 90.218 11.756 1 100.31 ? N1 LDA 706 H 1 HETATM 2 O O1 LDA . . . U 7 36.257 90.155 10.696 1 100.31 ? O1 LDA 706 H 1 HETATM 3 C CM1 LDA . . . U 7 35.47 88.894 12.319 1 100.28 ? CM1 LDA 706 H 1 HETATM 4 C CM2 LDA . . . U 7 36.337 91.029 12.74 1 100.31 ? CM2 LDA 706 H 1 HETATM 5 C C1 LDA . . . U 7 34.306 90.818 11.531 1 100.31 ? C1 LDA 706 H 1 HETATM 6 C C2 LDA . . . U 7 33.946 92.026 10.67 1 100.31 ? C2 LDA 706 H 1 HETATM 7 C C3 LDA . . . U 7 32.557 92.566 10.98 1 100.31 ? C3 LDA 706 H 1 HETATM 8 C C4 LDA . . . U 7 32.525 93.327 12.302 1 100.29 ? C4 LDA 706 H 1 HETATM 9 C C5 LDA . . . U 7 31.544 94.494 12.247 1 100.25 ? C5 LDA 706 H 1 HETATM 10 C C6 LDA . . . U 7 32.085 95.647 11.406 1 100.2 ? C6 LDA 706 H 1 HETATM 11 C C7 LDA . . . U 7 31.087 96.794 11.311 1 100.15 ? C7 LDA 706 H 1 HETATM 12 C C8 LDA . . . U 7 31.657 97.954 10.508 1 100.15 ? C8 LDA 706 H 1 HETATM 13 C C9 LDA . . . U 7 30.552 98.769 9.847 1 100.11 ? C9 LDA 706 H 1 HETATM 14 C C10 LDA . . . U 7 31.079 99.54 8.636 1 100.07 ? C10 LDA 706 H 1 HETATM 15 C C11 LDA . . . U 7 29.968 100.296 7.902 1 100.05 ? C11 LDA 706 H 1 HETATM 16 C C12 LDA . . . U 7 28.994 99.356 7.202 1 99.96 ? C12 LDA 706 H 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 16 #