data_1FNV # _model_server_result.job_id QVbQ0UMTry2ZzyGFiZVHnw _model_server_result.datetime_utc '2024-12-21 13:28:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fnv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":523}' # _entry.id 1FNV # _exptl.entry_id 1FNV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1FNV _cell.length_a 105.48 _cell.length_b 130.71 _cell.length_c 84.52 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FNV _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 87 A CYS 87 1_555 A SG CYS 98 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 B SG CYS 87 B CYS 387 1_555 B SG CYS 98 B CYS 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf3 C SG CYS 87 C CYS 687 1_555 C SG CYS 98 C CYS 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf4 D SG CYS 87 D CYS 987 1_555 D SG CYS 98 D CYS 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc1 A OD2 ASP 39 A ASP 39 1_555 F CD CD . A CD 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc2 A SG CYS 90 A CYS 90 1_555 L CD CD . C CD 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc3 A OE2 GLU 91 A GLU 91 1_555 O CD CD . C CD 824 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? metalc ? metalc4 A OE1 GLU 91 A GLU 91 1_555 O CD CD . C CD 824 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc5 F CD CD . A CD 223 1_555 G CD CD . A CD 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.135 ? metalc ? metalc6 B OD2 ASP 39 B ASP 339 1_555 I CD CD . B CD 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc7 B SG CYS 90 B CYS 390 1_555 J CD CD . B CD 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.564 ? metalc ? metalc8 B OE1 GLU 91 B GLU 391 1_555 S CD CD . D CD 1124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc9 B OE2 GLU 91 B GLU 391 1_555 S CD CD . D CD 1124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.903 ? metalc ? metalc10 J CD CD . B CD 524 1_555 D OE1 GLU 91 D GLU 991 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc11 J CD CD . B CD 524 1_555 D OE2 GLU 91 D GLU 991 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.902 ? metalc ? metalc12 L CD CD . C CD 224 1_555 C OE2 GLU 91 C GLU 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? metalc ? metalc13 L CD CD . C CD 224 1_555 C OE1 GLU 91 C GLU 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.849 ? metalc ? metalc14 C OD2 ASP 39 C ASP 639 1_555 N CD CD . C CD 823 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc15 C SG CYS 90 C CYS 690 1_555 O CD CD . C CD 824 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.533 ? metalc ? metalc16 N CD CD . C CD 823 1_555 P CD CD . C CD 825 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.893 ? metalc ? metalc17 D OD2 ASP 39 D ASP 939 1_555 R CD CD . D CD 1123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc18 R CD CD . D CD 1123 1_555 T CD CD . D CD 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.1 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1FNV _atom_sites.fract_transf_matrix[1][1] 0.00948 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007651 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011832 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CD A 1 222 222 CD CD . F 2 CD A 1 223 223 CD CD . G 2 CD A 1 225 225 CD CD . H 2 CD B 1 522 522 CD CD . I 2 CD B 1 523 523 CD CD . J 2 CD B 1 524 524 CD CD . K 2 CD B 1 525 525 CD CD . L 2 CD C 1 224 224 CD CD . M 2 CD C 1 822 822 CD CD . N 2 CD C 1 823 823 CD CD . O 2 CD C 1 824 824 CD CD . P 2 CD C 1 825 825 CD CD . Q 2 CD D 1 1122 1122 CD CD . R 2 CD D 1 1123 1123 CD CD . S 2 CD D 1 1124 1124 CD CD . T 2 CD D 1 1125 1125 CD CD . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.679 _atom_site.Cartn_y 30.526 _atom_site.Cartn_z 39.169 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 3.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 523 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 95 _model_server_stats.parse_time_ms 205 _model_server_stats.create_model_time_ms 79 _model_server_stats.query_time_ms 653 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #