data_1FPP # _model_server_result.job_id LvIqeMkByjGIYTcJ8NpBtA _model_server_result.datetime_utc '2024-12-11 21:46:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fpp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":439}' # _entry.id 1FPP # _exptl.entry_id 1FPP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1FPP _cell.length_a 170 _cell.length_b 170 _cell.length_c 68.86 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FPP _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A CG ASP 297 B ASP 297 1_555 C ZN ZN . B ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc2 A OD1 ASP 297 B ASP 297 1_555 C ZN ZN . B ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc3 A OD2 ASP 297 B ASP 297 1_555 C ZN ZN . B ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc4 A SG CYS 299 B CYS 299 1_555 C ZN ZN . B ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc5 A NE2 HIS 362 B HIS 362 1_555 C ZN ZN . B ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 311 n n P O2 PO4 sing 312 n n P O3 PO4 sing 313 n n P O4 PO4 sing 314 n n # _atom_sites.entry_id 1FPP _atom_sites.fract_transf_matrix[1][1] 0.005882 _atom_sites.fract_transf_matrix[1][2] 0.003396 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006792 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014522 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN B 1 438 422 ZN ZN . D 4 PO4 B 1 439 2 PO4 PO4 . E 5 FPP B 1 440 1 FPP FPP . F 6 HOH B 1 441 3 HOH HOH . F 6 HOH B 2 442 4 HOH HOH . F 6 HOH B 3 443 5 HOH HOH . F 6 HOH B 4 444 10 HOH HOH . F 6 HOH B 5 445 11 HOH HOH . F 6 HOH B 6 446 13 HOH HOH . F 6 HOH B 7 447 14 HOH HOH . F 6 HOH B 8 448 15 HOH HOH . F 6 HOH B 9 449 16 HOH HOH . G 6 HOH A 1 378 1 HOH HOH . G 6 HOH A 2 379 2 HOH HOH . G 6 HOH A 3 380 6 HOH HOH . G 6 HOH A 4 381 7 HOH HOH . G 6 HOH A 5 382 8 HOH HOH . G 6 HOH A 6 383 9 HOH HOH . G 6 HOH A 7 384 12 HOH HOH . G 6 HOH A 8 385 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 4 -48.353 86.394 18.087 1 8.43 ? P PO4 439 B 1 HETATM 2 O O1 PO4 . . . D 4 -47.344 85.299 17.859 1 7.23 ? O1 PO4 439 B 1 HETATM 3 O O2 PO4 . . . D 4 -47.696 87.736 18.292 1 6.46 ? O2 PO4 439 B 1 HETATM 4 O O3 PO4 . . . D 4 -49.293 86.49 16.917 1 7.37 ? O3 PO4 439 B 1 HETATM 5 O O4 PO4 . . . D 4 -49.196 86.067 19.375 1 7.56 ? O4 PO4 439 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 457 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #