data_1FRV
#
_model_server_result.job_id            VPKiHmJKXOEXJcteyuLKZg 
_model_server_result.datetime_utc      '2024-11-28 15:01:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1frv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":266}' 
#
_entry.id    1FRV 
#
_exptl.entry_id    1FRV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              295.795 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FE3-S4 CLUSTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         89.8 
_cell.angle_beta          102.9 
_cell.angle_gamma         90.8 
_cell.entry_id            1FRV 
_cell.length_a            63.6 
_cell.length_b            93.9 
_cell.length_c            69.2 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1FRV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I 1 1 
C,D,J,K,L,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 D SG CYS 65 D CYS 65 1_555 D SG CYS 530 D CYS 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? 
disulf ? disulf2 D SG CYS 68 D CYS 68 1_555 D SG CYS 533 D CYS 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.948 ? 
metalc ? metalc1 A SG CYS 17 A CYS 17 1_555 G FE1 SF4 . A SF4 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? 
metalc ? metalc2 A SG CYS 20 A CYS 20 1_555 G FE2 SF4 . A SF4 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc3 A SG CYS 112 A CYS 112 1_555 G FE4 SF4 . A SF4 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc4 A SG CYS 148 A CYS 148 1_555 G FE3 SF4 . A SF4 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc5 A ND1 HIS 185 A HIS 185 1_555 E FE4 SF4 . A SF4 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc6 A SG CYS 188 A CYS 188 1_555 E FE2 SF4 . A SF4 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc7 A SG CYS 213 A CYS 213 1_555 E FE3 SF4 . A SF4 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? 
metalc ? metalc8 A SG CYS 219 A CYS 219 1_555 E FE1 SF4 . A SF4 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc9 A SG CYS 228 A CYS 228 1_555 F FE4 F3S . A F3S 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc10 A SG CYS 246 A CYS 246 1_555 F FE1 F3S . A F3S 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? 
metalc ? metalc11 A SG CYS 249 A CYS 249 1_555 F FE3 F3S . A F3S 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc12 B SG CYS 65 B CYS 65 1_555 H NI NI . B NI 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc13 B SG CYS 68 B CYS 68 1_555 H NI NI . B NI 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc14 B SG CYS 530 B CYS 530 1_555 H NI NI . B NI 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? 
metalc ? metalc15 B SG CYS 533 B CYS 533 1_555 I FE FEL . B FEL 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc16 B SG CYS 533 B CYS 533 1_555 H NI NI . B NI 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? 
metalc ? metalc17 C SG CYS 17 C CYS 17 1_555 L FE1 SF4 . C SF4 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc18 C SG CYS 20 C CYS 20 1_555 L FE2 SF4 . C SF4 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? 
metalc ? metalc19 C SG CYS 112 C CYS 112 1_555 L FE4 SF4 . C SF4 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc20 C SG CYS 148 C CYS 148 1_555 L FE3 SF4 . C SF4 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc21 C ND1 HIS 185 C HIS 185 1_555 J FE4 SF4 . C SF4 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc22 C SG CYS 188 C CYS 188 1_555 J FE2 SF4 . C SF4 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
metalc ? metalc23 C SG CYS 213 C CYS 213 1_555 J FE3 SF4 . C SF4 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc24 C SG CYS 219 C CYS 219 1_555 J FE1 SF4 . C SF4 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc25 C SG CYS 228 C CYS 228 1_555 K FE4 F3S . C F3S 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc26 C SG CYS 246 C CYS 246 1_555 K FE3 F3S . C F3S 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc27 C SG CYS 249 C CYS 249 1_555 K FE1 F3S . C F3S 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc28 D SG CYS 65 D CYS 65 1_555 M NI NI . D NI 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? 
metalc ? metalc29 D SG CYS 68 D CYS 68 1_555 N FE FEL . D FEL 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc30 D SG CYS 68 D CYS 68 1_555 M NI NI . D NI 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc31 D SG CYS 530 D CYS 530 1_555 M NI NI . D NI 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? 
metalc ? metalc32 D SG CYS 533 D CYS 533 1_555 N FE FEL . D FEL 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
metalc ? metalc33 D SG CYS 533 D CYS 533 1_555 M NI NI . D NI 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? 
#
_chem_comp.formula           'Fe3 S4' 
_chem_comp.formula_weight    295.795 
_chem_comp.id                F3S 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FE3-S4 CLUSTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE1 S1 F3S sing 83 n n 
FE1 S2 F3S sing 84 n n 
FE1 S3 F3S sing 85 n n 
FE3 S1 F3S sing 86 n n 
FE3 S3 F3S sing 87 n n 
FE3 S4 F3S sing 88 n n 
FE4 S2 F3S sing 89 n n 
FE4 S3 F3S sing 90 n n 
FE4 S4 F3S sing 91 n n 
#
_atom_sites.entry_id                     1FRV 
_atom_sites.fract_transf_matrix[1][1]    0.015723 
_atom_sites.fract_transf_matrix[1][2]    0.00022 
_atom_sites.fract_transf_matrix[1][3]    0.003601 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010651 
_atom_sites.fract_transf_matrix[2][3]    -0.000004 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014825 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SF4 A 1 265 265 SF4 FS4 . 
F 4 F3S A 1 266 266 F3S FS3 . 
G 3 SF4 A 1 267 267 SF4 FS4 . 
H 5 NI B 1 538 538 NI NI . 
I 6 FEL B 1 537 537 FEL FEL . 
J 3 SF4 C 1 265 265 SF4 FS4 . 
K 4 F3S C 1 266 266 F3S FS3 . 
L 3 SF4 C 1 267 267 SF4 FS4 . 
M 5 NI D 1 538 538 NI NI . 
N 6 FEL D 1 537 537 FEL FEL . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE1 F3S . . . F 4 15.242 78.517 36.887 1 15.69 ? FE1 F3S 266 A 1 
HETATM 2 FE FE3 F3S . . . F 4 16.538 78.95 39.212 1 12.58 ? FE3 F3S 266 A 1 
HETATM 3 FE FE4 F3S . . . F 4 13.843 78.824 39.252 1 13.69 ? FE4 F3S 266 A 1 
HETATM 4 S S1 F3S . . . F 4 17.014 79.905 37.205 1 13.03 ? S1 F3S 266 A 1 
HETATM 5 S S2 F3S . . . F 4 13.342 79.751 37.191 1 13.46 ? S2 F3S 266 A 1 
HETATM 6 S S3 F3S . . . F 4 15.244 77.113 38.7 1 10.53 ? S3 F3S 266 A 1 
HETATM 7 S S4 F3S . . . F 4 15.13 80.332 40.353 1 11.68 ? S4 F3S 266 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           7 
#