data_1FTC # _model_server_result.job_id Z9p9ik8A2J77-Bu2foWfSQ _model_server_result.datetime_utc '2024-10-24 04:24:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ftc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":108}' # _entry.id 1FTC # _exptl.entry_id 1FTC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 295.795 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE3-S4 CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.4 _cell.angle_gamma 90 _cell.entry_id 1FTC _cell.length_a 39.3 _cell.length_b 73.7 _cell.length_c 45.1 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FTC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LYS 12 A LYS 12 1_555 A N CSS 13 A CSS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C CSS 13 A CSS 13 1_555 A N THR 14 A THR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 B C LYS 12 B LYS 12 1_555 B N CSS 13 B CSS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale4 B C CSS 13 B CSS 13 1_555 B N THR 14 B THR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? metalc ? metalc1 A SG CYS 8 A CYS 8 1_555 D FE4 F3S . A F3S 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc2 A SG CYS 16 A CYS 16 1_555 D FE1 F3S . A F3S 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc3 A SG CYS 20 A CYS 20 1_555 C FE4 SF4 . A SF4 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc4 A SG CYS 39 A CYS 39 1_555 C FE1 SF4 . A SF4 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc5 A SG CYS 42 A CYS 42 1_555 C FE2 SF4 . A SF4 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc6 A SG CYS 45 A CYS 45 1_555 C FE3 SF4 . A SF4 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc7 A SG CYS 49 A CYS 49 1_555 D FE3 F3S . A F3S 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc8 B SG CYS 8 B CYS 8 1_555 F FE4 F3S . B F3S 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc9 B SG CYS 16 B CYS 16 1_555 F FE1 F3S . B F3S 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc10 B SG CYS 20 B CYS 20 1_555 E FE4 SF4 . B SF4 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc11 B SG CYS 39 B CYS 39 1_555 E FE1 SF4 . B SF4 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc12 B SG CYS 42 B CYS 42 1_555 E FE2 SF4 . B SF4 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc13 B SG CYS 45 B CYS 45 1_555 E FE3 SF4 . B SF4 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc14 B SG CYS 49 B CYS 49 1_555 F FE3 F3S . B F3S 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? # _chem_comp.formula 'Fe3 S4' _chem_comp.formula_weight 295.795 _chem_comp.id F3S _chem_comp.mon_nstd_flag . _chem_comp.name 'FE3-S4 CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 F3S sing 97 n n FE1 S2 F3S sing 98 n n FE1 S3 F3S sing 99 n n FE3 S1 F3S sing 100 n n FE3 S3 F3S sing 101 n n FE3 S4 F3S sing 102 n n FE4 S2 F3S sing 103 n n FE4 S3 F3S sing 104 n n FE4 S4 F3S sing 105 n n # _atom_sites.entry_id 1FTC _atom_sites.fract_transf_matrix[1][1] 0.025445 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003757 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013569 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022413 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SF4 A 1 107 107 SF4 FS4 . D 3 F3S A 1 108 108 F3S FS3 . E 2 SF4 B 1 107 107 SF4 FS4 . F 3 F3S B 1 108 108 F3S FS3 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 F3S . . . F 3 -4.065 25.861 2.899 1 7.55 ? FE1 F3S 108 B 1 HETATM 2 FE FE3 F3S . . . F 3 -3.003 27.966 2.642 1 8.71 ? FE3 F3S 108 B 1 HETATM 3 FE FE4 F3S . . . F 3 -2.627 26.653 4.635 1 5.14 ? FE4 F3S 108 B 1 HETATM 4 S S1 F3S . . . F 3 -5.227 27.67 2.295 1 6.02 ? S1 F3S 108 B 1 HETATM 5 S S2 F3S . . . F 3 -4.631 25.768 5.083 1 3.5 ? S2 F3S 108 B 1 HETATM 6 S S3 F3S . . . F 3 -1.819 26.033 2.578 1 4.86 ? S3 F3S 108 B 1 HETATM 7 S S4 F3S . . . F 3 -3.053 28.874 4.693 1 2.74 ? S4 F3S 108 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #