data_1FV9 # _model_server_result.job_id vI396O4yWYWe9zq1jwgrhw _model_server_result.datetime_utc '2024-12-14 22:21:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fv9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":246}' # _entry.id 1FV9 # _exptl.entry_id 1FV9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 149.15 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-5-HYDROXY-BENZIMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1FV9 _cell.length_a 55.16 _cell.length_b 53 _cell.length_c 82.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FV9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 A CYS 30 1_555 A SG CYS 47 A CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? disulf ? disulf2 A SG CYS 39 A CYS 38 1_555 A SG CYS 110 A CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf3 A SG CYS 135 A CYS 134 1_555 A SG CYS 204 A CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf4 A SG CYS 167 A CYS 166 1_555 A SG CYS 183 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf5 A SG CYS 194 A CYS 193 1_555 A SG CYS 222 A CYS 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? # _chem_comp.formula 'C7 H7 N3 O' _chem_comp.formula_weight 149.15 _chem_comp.id 172 _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-5-HYDROXY-BENZIMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 172 doub 1 n y C1 C6 172 sing 2 n y C1 O17 172 sing 3 n n C2 C3 172 sing 4 n y C2 HC2 172 sing 5 n n C3 C4 172 doub 6 n y C3 N10 172 sing 7 n y C4 C5 172 sing 8 n y C4 N12 172 sing 9 n y C5 C6 172 doub 10 n y C5 HC5 172 sing 11 n n C6 HC6 172 sing 12 n n N10 C11 172 doub 13 n y C11 N12 172 sing 14 n y C11 N14 172 sing 15 n n N12 H12 172 sing 16 n n N14 H141 172 sing 17 n n N14 H142 172 sing 18 n n O17 H17 172 sing 19 n n # _atom_sites.entry_id 1FV9 _atom_sites.fract_transf_matrix[1][1] 0.018129 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012151 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 245 1 SO4 SO4 . C 3 172 A 1 246 1 172 172 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 172 . . . C 3 21.021 16.061 33.587 1 20 ? C1 172 246 A 1 HETATM 2 C C2 172 . . . C 3 21.013 17.366 34.006 1 20 ? C2 172 246 A 1 HETATM 3 C C3 172 . . . C 3 19.844 18.031 33.911 1 20 ? C3 172 246 A 1 HETATM 4 C C4 172 . . . C 3 18.777 17.524 33.473 1 20 ? C4 172 246 A 1 HETATM 5 C C5 172 . . . C 3 18.671 16.256 33.031 1 20 ? C5 172 246 A 1 HETATM 6 C C6 172 . . . C 3 19.838 15.474 33.078 1 20 ? C6 172 246 A 1 HETATM 7 N N10 172 . . . C 3 19.756 19.342 34.264 1 20 ? N10 172 246 A 1 HETATM 8 C C11 172 . . . C 3 18.401 19.575 33.958 1 20 ? C11 172 246 A 1 HETATM 9 N N12 172 . . . C 3 17.744 18.418 33.449 1 20 ? N12 172 246 A 1 HETATM 10 N N14 172 . . . C 3 17.788 20.778 34.148 1 20 ? N14 172 246 A 1 HETATM 11 O O17 172 . . . C 3 22.171 15.342 33.652 1 20 ? O17 172 246 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 501 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 11 #