data_1FVP # _model_server_result.job_id F3JzfjqPF97dVFwLCubjfg _model_server_result.datetime_utc '2024-11-05 01:02:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fvp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":233}' # _entry.id 1FVP # _exptl.entry_id 1FVP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 682.699 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-(3-TETRADECANOIC ACID) FLAVINE MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1FVP _cell.length_a 76.8 _cell.length_b 76.8 _cell.length_c 242 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FVP _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C31 H47 N4 O11 P' _chem_comp.formula_weight 682.699 _chem_comp.id FMA _chem_comp.mon_nstd_flag . _chem_comp.name '6-(3-TETRADECANOIC ACID) FLAVINE MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMA sing 83 n y N1 C10 FMA doub 84 n y C2 O2 FMA doub 85 n n C2 N3 FMA sing 86 n y N3 C4 FMA sing 87 n y N3 HN3 FMA sing 88 n n C4 O4 FMA doub 89 n n C4 C4A FMA sing 90 n y C4A N5 FMA doub 91 n y C4A C10 FMA sing 92 n y N5 C5A FMA sing 93 n y C5A C6 FMA doub 94 n y C5A C9A FMA sing 95 n y C6 C7 FMA sing 96 n y C6 C3' FMA sing 97 n n C7 C7M FMA sing 98 n n C7 C8 FMA doub 99 n y C7M HM71 FMA sing 100 n n C7M HM72 FMA sing 101 n n C7M HM73 FMA sing 102 n n C8 C8M FMA sing 103 n n C8 C9 FMA sing 104 n y C8M HM81 FMA sing 105 n n C8M HM82 FMA sing 106 n n C8M HM83 FMA sing 107 n n C9 C9A FMA doub 108 n y C9 H9 FMA sing 109 n n C9A N10 FMA sing 110 n y N10 C10 FMA sing 111 n y N10 C1B FMA sing 112 n n C1B C2B FMA sing 113 n n C1B "H1'1" FMA sing 114 n n C1B "H1'2" FMA sing 115 n n C2B O2B FMA sing 116 n n C2B C3B FMA sing 117 n n C2B H2' FMA sing 118 n n O2B HO2' FMA sing 119 n n C3B O3' FMA sing 120 n n C3B C4B FMA sing 121 n n C3B H3B FMA sing 122 n n O3' HO3' FMA sing 123 n n C4B O4' FMA sing 124 n n C4B C5B FMA sing 125 n n C4B H4' FMA sing 126 n n O4' HO4' FMA sing 127 n n C5B O5' FMA sing 128 n n C5B "H5'1" FMA sing 129 n n C5B "H5'2" FMA sing 130 n n O5' P FMA sing 131 n n P O1P FMA doub 132 n n P O2P FMA sing 133 n n P O3P FMA sing 134 n n O2P HOP2 FMA sing 135 n n O3P HOP3 FMA sing 136 n n C1' O1' FMA doub 137 n n C1' O2' FMA sing 138 n n C1' C2' FMA sing 139 n n O2' HO2A FMA sing 140 n n C2' C3' FMA sing 141 n n C2' "H2'1" FMA sing 142 n n C2' "H2'2" FMA sing 143 n n C3' C4' FMA sing 144 n n C3' H3' FMA sing 145 n n C4' C5' FMA sing 146 n n C4' "H4'1" FMA sing 147 n n C4' "H4'2" FMA sing 148 n n C5' C6' FMA sing 149 n n C5' H5B FMA sing 150 n n C5' H5D FMA sing 151 n n C6' C7' FMA sing 152 n n C6' "H6'1" FMA sing 153 n n C6' "H6'2" FMA sing 154 n n C7' C8' FMA sing 155 n n C7' "H7'1" FMA sing 156 n n C7' "H7'2" FMA sing 157 n n C8' C9' FMA sing 158 n n C8' "H8'1" FMA sing 159 n n C8' "H8'2" FMA sing 160 n n C9' C11 FMA sing 161 n n C9' "H9'1" FMA sing 162 n n C9' "H9'2" FMA sing 163 n n C11 C12 FMA sing 164 n n C11 H111 FMA sing 165 n n C11 H112 FMA sing 166 n n C12 C13 FMA sing 167 n n C12 H121 FMA sing 168 n n C12 H122 FMA sing 169 n n C13 C14 FMA sing 170 n n C13 H131 FMA sing 171 n n C13 H132 FMA sing 172 n n C14 C15 FMA sing 173 n n C14 H141 FMA sing 174 n n C14 H142 FMA sing 175 n n C15 H151 FMA sing 176 n n C15 H152 FMA sing 177 n n C15 H153 FMA sing 178 n n # _atom_sites.entry_id 1FVP _atom_sites.fract_transf_matrix[1][1] 0.013021 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013021 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004132 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMA A 1 232 232 FMA FMA . D 2 FMA A 1 233 233 FMA FMA . E 2 FMA B 1 232 232 FMA FMA . F 2 FMA B 1 233 233 FMA FMA . G 3 HOH A 1 234 234 HOH HOH . G 3 HOH A 2 235 235 HOH HOH . G 3 HOH A 3 236 236 HOH HOH . G 3 HOH A 4 237 237 HOH HOH . G 3 HOH A 5 238 238 HOH HOH . G 3 HOH A 6 239 239 HOH HOH . G 3 HOH A 7 240 240 HOH HOH . G 3 HOH A 8 241 241 HOH HOH . G 3 HOH A 9 242 242 HOH HOH . G 3 HOH A 10 245 245 HOH HOH . G 3 HOH A 11 246 246 HOH HOH . G 3 HOH A 12 247 247 HOH HOH . G 3 HOH A 13 248 248 HOH HOH . G 3 HOH A 14 249 249 HOH HOH . G 3 HOH A 15 250 250 HOH HOH . G 3 HOH A 16 251 251 HOH HOH . G 3 HOH A 17 252 252 HOH HOH . G 3 HOH A 18 254 254 HOH HOH . G 3 HOH A 19 255 255 HOH HOH . G 3 HOH A 20 257 257 HOH HOH . G 3 HOH A 21 259 259 HOH HOH . G 3 HOH A 22 260 260 HOH HOH . G 3 HOH A 23 261 261 HOH HOH . G 3 HOH A 24 262 262 HOH HOH . G 3 HOH A 25 263 263 HOH HOH . G 3 HOH A 26 264 264 HOH HOH . G 3 HOH A 27 265 265 HOH HOH . G 3 HOH A 28 266 266 HOH HOH . G 3 HOH A 29 267 267 HOH HOH . G 3 HOH A 30 268 268 HOH HOH . G 3 HOH A 31 269 269 HOH HOH . G 3 HOH A 32 270 270 HOH HOH . G 3 HOH A 33 271 271 HOH HOH . G 3 HOH A 34 272 272 HOH HOH . G 3 HOH A 35 275 275 HOH HOH . G 3 HOH A 36 279 279 HOH HOH . G 3 HOH A 37 287 287 HOH HOH . H 3 HOH B 1 243 243 HOH HOH . H 3 HOH B 2 244 244 HOH HOH . H 3 HOH B 3 253 253 HOH HOH . H 3 HOH B 4 256 256 HOH HOH . H 3 HOH B 5 258 258 HOH HOH . H 3 HOH B 6 273 273 HOH HOH . H 3 HOH B 7 274 274 HOH HOH . H 3 HOH B 8 276 276 HOH HOH . H 3 HOH B 9 277 277 HOH HOH . H 3 HOH B 10 278 278 HOH HOH . H 3 HOH B 11 280 280 HOH HOH . H 3 HOH B 12 281 281 HOH HOH . H 3 HOH B 13 282 282 HOH HOH . H 3 HOH B 14 283 283 HOH HOH . H 3 HOH B 15 284 284 HOH HOH . H 3 HOH B 16 285 285 HOH HOH . H 3 HOH B 17 286 286 HOH HOH . H 3 HOH B 18 288 288 HOH HOH . H 3 HOH B 19 289 289 HOH HOH . H 3 HOH B 20 290 290 HOH HOH . H 3 HOH B 21 291 291 HOH HOH . H 3 HOH B 22 292 292 HOH HOH . H 3 HOH B 23 293 293 HOH HOH . H 3 HOH B 24 294 294 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMA . . . D 2 3.291 61.546 81.43 1 60.48 ? N1 FMA 233 A 1 HETATM 2 C C2 FMA . . . D 2 4.158 61.287 82.41 1 60.72 ? C2 FMA 233 A 1 HETATM 3 O O2 FMA . . . D 2 4.14 61.657 83.523 1 61.31 ? O2 FMA 233 A 1 HETATM 4 N N3 FMA . . . D 2 5.304 60.432 82.132 1 60.32 ? N3 FMA 233 A 1 HETATM 5 C C4 FMA . . . D 2 5.498 59.908 80.906 1 60.08 ? C4 FMA 233 A 1 HETATM 6 O O4 FMA . . . D 2 6.47 59.208 80.721 1 60.17 ? O4 FMA 233 A 1 HETATM 7 C C4A FMA . . . D 2 4.559 60.203 79.869 1 59.98 ? C4A FMA 233 A 1 HETATM 8 N N5 FMA . . . D 2 4.654 59.749 78.645 1 59.61 ? N5 FMA 233 A 1 HETATM 9 C C5A FMA . . . D 2 3.809 59.993 77.631 1 59.09 ? C5A FMA 233 A 1 HETATM 10 C C6 FMA . . . D 2 3.991 59.462 76.357 1 58.14 ? C6 FMA 233 A 1 HETATM 11 C C7 FMA . . . D 2 3.07 59.77 75.387 1 58.58 ? C7 FMA 233 A 1 HETATM 12 C C7M FMA . . . D 2 3.161 59.227 73.918 1 58.82 ? C7M FMA 233 A 1 HETATM 13 C C8 FMA . . . D 2 1.94 60.627 75.659 1 58.87 ? C8 FMA 233 A 1 HETATM 14 C C8M FMA . . . D 2 0.915 60.992 74.635 1 58.53 ? C8M FMA 233 A 1 HETATM 15 C C9 FMA . . . D 2 1.794 61.138 76.931 1 59.24 ? C9 FMA 233 A 1 HETATM 16 C C9A FMA . . . D 2 2.668 60.861 77.941 1 59.43 ? C9A FMA 233 A 1 HETATM 17 N N10 FMA . . . D 2 2.571 61.337 79.242 1 59.88 ? N10 FMA 233 A 1 HETATM 18 C C10 FMA . . . D 2 3.423 61.09 80.236 1 60.07 ? C10 FMA 233 A 1 HETATM 19 C C1B FMA . . . D 2 1.397 62.242 79.621 1 60.34 ? C1B FMA 233 A 1 HETATM 20 C C2B FMA . . . D 2 0.97 62.168 81.15 1 61.21 ? C2B FMA 233 A 1 HETATM 21 O O2B FMA . . . D 2 -0.423 61.941 81.036 1 61.05 ? O2B FMA 233 A 1 HETATM 22 C C3B FMA . . . D 2 1.327 63.468 81.834 1 62.19 ? C3B FMA 233 A 1 HETATM 23 O O3' FMA . . . D 2 2.327 64.147 81.144 1 62.26 ? O3' FMA 233 A 1 HETATM 24 C C4B FMA . . . D 2 1.741 63.35 83.305 1 63.13 ? C4B FMA 233 A 1 HETATM 25 O O4' FMA . . . D 2 0.677 62.71 84.097 1 62.91 ? O4' FMA 233 A 1 HETATM 26 C C5B FMA . . . D 2 2.005 64.756 83.912 1 64.3 ? C5B FMA 233 A 1 HETATM 27 O O5' FMA . . . D 2 1.037 64.889 85.114 1 65.69 ? O5' FMA 233 A 1 HETATM 28 P P FMA . . . D 2 0.042 66.072 85.443 1 66.69 ? P FMA 233 A 1 HETATM 29 O O1P FMA . . . D 2 1.071 67.212 85.763 1 66.42 ? O1P FMA 233 A 1 HETATM 30 O O2P FMA . . . D 2 -0.736 66.342 84.25 1 66.35 ? O2P FMA 233 A 1 HETATM 31 O O3P FMA . . . D 2 -0.811 65.644 86.442 1 66.81 ? O3P FMA 233 A 1 HETATM 32 C C1' FMA . . . D 2 7.429 58.964 75.181 0.92 56.81 ? C1' FMA 233 A 1 HETATM 33 O O1' FMA . . . D 2 6.855 58.971 74.026 0.84 56.91 ? O1' FMA 233 A 1 HETATM 34 O O2' FMA . . . D 2 8.626 59.26 75.256 0.69 56.83 ? O2' FMA 233 A 1 HETATM 35 C C2' FMA . . . D 2 6.488 59.295 76.292 0.94 56.8 ? C2' FMA 233 A 1 HETATM 36 C C3' FMA . . . D 2 5.143 58.571 76.142 0.98 56.83 ? C3' FMA 233 A 1 HETATM 37 C C4' FMA . . . D 2 5.187 57.326 76.975 1 55.71 ? C4' FMA 233 A 1 HETATM 38 C C5' FMA . . . D 2 5.577 56.009 76.348 1 54.27 ? C5' FMA 233 A 1 HETATM 39 C C6' FMA . . . D 2 4.682 54.864 76.753 1 52.9 ? C6' FMA 233 A 1 HETATM 40 C C7' FMA . . . D 2 5.389 53.517 76.693 1 51.63 ? C7' FMA 233 A 1 HETATM 41 C C8' FMA . . . D 2 4.838 52.526 75.758 1 50.39 ? C8' FMA 233 A 1 HETATM 42 C C9' FMA . . . D 2 3.801 51.526 76.24 1 49.4 ? C9' FMA 233 A 1 HETATM 43 C C11 FMA . . . D 2 3.071 50.837 75.128 1 48.72 ? C11 FMA 233 A 1 HETATM 44 C C12 FMA . . . D 2 3.737 50.422 73.868 1 48.26 ? C12 FMA 233 A 1 HETATM 45 C C13 FMA . . . D 2 2.983 49.631 72.852 1 47.59 ? C13 FMA 233 A 1 HETATM 46 C C14 FMA . . . D 2 3.73 49.196 71.632 1 47.07 ? C14 FMA 233 A 1 HETATM 47 C C15 FMA . . . D 2 4.619 50.243 71.023 1 46.97 ? C15 FMA 233 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 213 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 47 #