data_1FXQ # _model_server_result.job_id kXdRKZ0WRCz7FDOK12DMvQ _model_server_result.datetime_utc '2024-11-23 22:02:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fxq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1269}' # _entry.id 1FXQ # _exptl.entry_id 1FXQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 232.126 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ARABINOSE-5-PHOSPHATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1FXQ _cell.length_a 84.445 _cell.length_b 84.445 _cell.length_c 160.057 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FXQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C5 H13 O8 P' _chem_comp.formula_weight 232.126 _chem_comp.id A5P _chem_comp.mon_nstd_flag . _chem_comp.name ARABINOSE-5-PHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 A5P sing 1 n n C1 C2 A5P sing 2 n n C1 H11 A5P sing 3 n n C1 H12 A5P sing 4 n n O1 HO1 A5P sing 5 n n C2 O2 A5P sing 6 n n C2 C3 A5P sing 7 n n C2 HC2 A5P sing 8 n n O2 HO2 A5P sing 9 n n C3 O3 A5P sing 10 n n C3 C4 A5P sing 11 n n C3 HC3 A5P sing 12 n n O3 HO3 A5P sing 13 n n C4 O4 A5P sing 14 n n C4 C5 A5P sing 15 n n C4 HC4 A5P sing 16 n n O4 HO4 A5P sing 17 n n C5 O5 A5P sing 18 n n C5 H51 A5P sing 19 n n C5 H52 A5P sing 20 n n O5 P A5P sing 21 n n P O1P A5P doub 22 n n P O2P A5P sing 23 n n P O3P A5P sing 24 n n O2P HOP2 A5P sing 25 n n O3P HOP3 A5P sing 26 n n # _atom_sites.entry_id 1FXQ _atom_sites.fract_transf_matrix[1][1] 0.011842 _atom_sites.fract_transf_matrix[1][2] 0.006837 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013674 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006248 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEP A 1 1268 1268 PEP PEP . D 3 A5P A 1 1269 1269 A5P A5P . E 2 PEP B 1 2268 2268 PEP PEP . F 3 A5P B 1 2269 2269 A5P A5P . G 4 HOH A 1 3001 3001 HOH HOH . G 4 HOH A 2 3002 3002 HOH HOH . G 4 HOH A 3 3004 3004 HOH HOH . G 4 HOH A 4 3005 3005 HOH HOH . G 4 HOH A 5 3007 3007 HOH HOH . G 4 HOH A 6 3008 3008 HOH HOH . G 4 HOH A 7 3012 3012 HOH HOH . G 4 HOH A 8 3014 3014 HOH HOH . G 4 HOH A 9 3015 3015 HOH HOH . G 4 HOH A 10 3016 3016 HOH HOH . G 4 HOH A 11 3019 3019 HOH HOH . G 4 HOH A 12 3021 3021 HOH HOH . G 4 HOH A 13 3022 3022 HOH HOH . G 4 HOH A 14 3025 3025 HOH HOH . G 4 HOH A 15 3026 3026 HOH HOH . G 4 HOH A 16 3028 3028 HOH HOH . G 4 HOH A 17 3029 3029 HOH HOH . G 4 HOH A 18 3030 3030 HOH HOH . G 4 HOH A 19 3032 3032 HOH HOH . G 4 HOH A 20 3034 3034 HOH HOH . G 4 HOH A 21 3037 3037 HOH HOH . G 4 HOH A 22 3039 3039 HOH HOH . G 4 HOH A 23 3041 3041 HOH HOH . G 4 HOH A 24 3042 3042 HOH HOH . G 4 HOH A 25 3043 3043 HOH HOH . G 4 HOH A 26 3046 3046 HOH HOH . G 4 HOH A 27 3047 3047 HOH HOH . G 4 HOH A 28 3049 3049 HOH HOH . G 4 HOH A 29 3051 3051 HOH HOH . G 4 HOH A 30 3053 3053 HOH HOH . G 4 HOH A 31 3056 3056 HOH HOH . G 4 HOH A 32 3057 3057 HOH HOH . G 4 HOH A 33 3063 3063 HOH HOH . G 4 HOH A 34 3065 3065 HOH HOH . G 4 HOH A 35 3071 3071 HOH HOH . G 4 HOH A 36 3072 3072 HOH HOH . G 4 HOH A 37 3073 3073 HOH HOH . G 4 HOH A 38 3075 3075 HOH HOH . G 4 HOH A 39 3077 3077 HOH HOH . G 4 HOH A 40 3078 3078 HOH HOH . G 4 HOH A 41 3080 3080 HOH HOH . G 4 HOH A 42 3081 3081 HOH HOH . G 4 HOH A 43 3082 3082 HOH HOH . G 4 HOH A 44 3083 3083 HOH HOH . G 4 HOH A 45 3084 3084 HOH HOH . G 4 HOH A 46 3085 3085 HOH HOH . G 4 HOH A 47 3087 3087 HOH HOH . G 4 HOH A 48 3090 3090 HOH HOH . G 4 HOH A 49 3091 3091 HOH HOH . G 4 HOH A 50 3094 3094 HOH HOH . G 4 HOH A 51 3095 3095 HOH HOH . G 4 HOH A 52 3096 3096 HOH HOH . G 4 HOH A 53 3097 3097 HOH HOH . G 4 HOH A 54 3098 3098 HOH HOH . G 4 HOH A 55 3099 3099 HOH HOH . G 4 HOH A 56 3100 3100 HOH HOH . G 4 HOH A 57 3101 3101 HOH HOH . G 4 HOH A 58 3104 3104 HOH HOH . G 4 HOH A 59 3107 3107 HOH HOH . G 4 HOH A 60 3108 3108 HOH HOH . G 4 HOH A 61 3109 3109 HOH HOH . G 4 HOH A 62 3112 3112 HOH HOH . G 4 HOH A 63 3115 3115 HOH HOH . G 4 HOH A 64 3122 3122 HOH HOH . G 4 HOH A 65 3123 3123 HOH HOH . G 4 HOH A 66 3125 3125 HOH HOH . G 4 HOH A 67 3128 3128 HOH HOH . G 4 HOH A 68 3129 3129 HOH HOH . G 4 HOH A 69 3130 3130 HOH HOH . G 4 HOH A 70 3132 3132 HOH HOH . G 4 HOH A 71 3133 3133 HOH HOH . G 4 HOH A 72 3136 3136 HOH HOH . G 4 HOH A 73 3140 3140 HOH HOH . G 4 HOH A 74 3145 3145 HOH HOH . G 4 HOH A 75 3146 3146 HOH HOH . G 4 HOH A 76 3149 3149 HOH HOH . G 4 HOH A 77 3152 3152 HOH HOH . G 4 HOH A 78 3155 3155 HOH HOH . G 4 HOH A 79 3157 3157 HOH HOH . G 4 HOH A 80 3158 3158 HOH HOH . G 4 HOH A 81 3161 3161 HOH HOH . G 4 HOH A 82 3162 3162 HOH HOH . G 4 HOH A 83 3166 3166 HOH HOH . G 4 HOH A 84 3168 3168 HOH HOH . G 4 HOH A 85 3170 3170 HOH HOH . G 4 HOH A 86 3172 3172 HOH HOH . G 4 HOH A 87 3174 3174 HOH HOH . G 4 HOH A 88 3177 3177 HOH HOH . G 4 HOH A 89 3178 3178 HOH HOH . G 4 HOH A 90 3181 3181 HOH HOH . G 4 HOH A 91 3183 3183 HOH HOH . G 4 HOH A 92 3185 3185 HOH HOH . G 4 HOH A 93 3187 3187 HOH HOH . G 4 HOH A 94 3188 3188 HOH HOH . G 4 HOH A 95 3192 3192 HOH HOH . G 4 HOH A 96 3195 3195 HOH HOH . G 4 HOH A 97 3198 3198 HOH HOH . G 4 HOH A 98 3199 3199 HOH HOH . G 4 HOH A 99 3201 3201 HOH HOH . G 4 HOH A 100 3202 3202 HOH HOH . G 4 HOH A 101 3205 3205 HOH HOH . G 4 HOH A 102 3206 3206 HOH HOH . G 4 HOH A 103 3207 3207 HOH HOH . G 4 HOH A 104 3210 3210 HOH HOH . G 4 HOH A 105 3211 3211 HOH HOH . G 4 HOH A 106 3212 3212 HOH HOH . H 4 HOH B 1 3003 3003 HOH HOH . H 4 HOH B 2 3006 3006 HOH HOH . H 4 HOH B 3 3009 3009 HOH HOH . H 4 HOH B 4 3010 3010 HOH HOH . H 4 HOH B 5 3011 3011 HOH HOH . H 4 HOH B 6 3013 3013 HOH HOH . H 4 HOH B 7 3017 3017 HOH HOH . H 4 HOH B 8 3018 3018 HOH HOH . H 4 HOH B 9 3020 3020 HOH HOH . H 4 HOH B 10 3023 3023 HOH HOH . H 4 HOH B 11 3027 3027 HOH HOH . H 4 HOH B 12 3031 3031 HOH HOH . H 4 HOH B 13 3033 3033 HOH HOH . H 4 HOH B 14 3035 3035 HOH HOH . H 4 HOH B 15 3036 3036 HOH HOH . H 4 HOH B 16 3038 3038 HOH HOH . H 4 HOH B 17 3040 3040 HOH HOH . H 4 HOH B 18 3044 3044 HOH HOH . H 4 HOH B 19 3045 3045 HOH HOH . H 4 HOH B 20 3048 3048 HOH HOH . H 4 HOH B 21 3050 3050 HOH HOH . H 4 HOH B 22 3052 3052 HOH HOH . H 4 HOH B 23 3054 3054 HOH HOH . H 4 HOH B 24 3055 3055 HOH HOH . H 4 HOH B 25 3058 3058 HOH HOH . H 4 HOH B 26 3059 3059 HOH HOH . H 4 HOH B 27 3060 3060 HOH HOH . H 4 HOH B 28 3061 3061 HOH HOH . H 4 HOH B 29 3062 3062 HOH HOH . H 4 HOH B 30 3064 3064 HOH HOH . H 4 HOH B 31 3066 3066 HOH HOH . H 4 HOH B 32 3067 3067 HOH HOH . H 4 HOH B 33 3068 3068 HOH HOH . H 4 HOH B 34 3069 3069 HOH HOH . H 4 HOH B 35 3070 3070 HOH HOH . H 4 HOH B 36 3074 3074 HOH HOH . H 4 HOH B 37 3076 3076 HOH HOH . H 4 HOH B 38 3079 3079 HOH HOH . H 4 HOH B 39 3088 3088 HOH HOH . H 4 HOH B 40 3092 3092 HOH HOH . H 4 HOH B 41 3093 3093 HOH HOH . H 4 HOH B 42 3102 3102 HOH HOH . H 4 HOH B 43 3103 3103 HOH HOH . H 4 HOH B 44 3105 3105 HOH HOH . H 4 HOH B 45 3110 3110 HOH HOH . H 4 HOH B 46 3111 3111 HOH HOH . H 4 HOH B 47 3113 3113 HOH HOH . H 4 HOH B 48 3114 3114 HOH HOH . H 4 HOH B 49 3116 3116 HOH HOH . H 4 HOH B 50 3117 3117 HOH HOH . H 4 HOH B 51 3118 3118 HOH HOH . H 4 HOH B 52 3119 3119 HOH HOH . H 4 HOH B 53 3120 3120 HOH HOH . H 4 HOH B 54 3121 3121 HOH HOH . H 4 HOH B 55 3124 3124 HOH HOH . H 4 HOH B 56 3126 3126 HOH HOH . H 4 HOH B 57 3127 3127 HOH HOH . H 4 HOH B 58 3131 3131 HOH HOH . H 4 HOH B 59 3134 3134 HOH HOH . H 4 HOH B 60 3135 3135 HOH HOH . H 4 HOH B 61 3137 3137 HOH HOH . H 4 HOH B 62 3138 3138 HOH HOH . H 4 HOH B 63 3139 3139 HOH HOH . H 4 HOH B 64 3141 3141 HOH HOH . H 4 HOH B 65 3142 3142 HOH HOH . H 4 HOH B 66 3143 3143 HOH HOH . H 4 HOH B 67 3144 3144 HOH HOH . H 4 HOH B 68 3147 3147 HOH HOH . H 4 HOH B 69 3148 3148 HOH HOH . H 4 HOH B 70 3150 3150 HOH HOH . H 4 HOH B 71 3153 3153 HOH HOH . H 4 HOH B 72 3154 3154 HOH HOH . H 4 HOH B 73 3156 3156 HOH HOH . H 4 HOH B 74 3160 3160 HOH HOH . H 4 HOH B 75 3163 3163 HOH HOH . H 4 HOH B 76 3164 3164 HOH HOH . H 4 HOH B 77 3165 3165 HOH HOH . H 4 HOH B 78 3167 3167 HOH HOH . H 4 HOH B 79 3169 3169 HOH HOH . H 4 HOH B 80 3171 3171 HOH HOH . H 4 HOH B 81 3173 3173 HOH HOH . H 4 HOH B 82 3175 3175 HOH HOH . H 4 HOH B 83 3176 3176 HOH HOH . H 4 HOH B 84 3179 3179 HOH HOH . H 4 HOH B 85 3180 3180 HOH HOH . H 4 HOH B 86 3182 3182 HOH HOH . H 4 HOH B 87 3184 3184 HOH HOH . H 4 HOH B 88 3186 3186 HOH HOH . H 4 HOH B 89 3189 3189 HOH HOH . H 4 HOH B 90 3190 3190 HOH HOH . H 4 HOH B 91 3191 3191 HOH HOH . H 4 HOH B 92 3193 3193 HOH HOH . H 4 HOH B 93 3194 3194 HOH HOH . H 4 HOH B 94 3196 3196 HOH HOH . H 4 HOH B 95 3197 3197 HOH HOH . H 4 HOH B 96 3200 3200 HOH HOH . H 4 HOH B 97 3203 3203 HOH HOH . H 4 HOH B 98 3209 3209 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 A5P . . . D 3 35.707 51.257 18.193 1 47.65 ? C1 A5P 1269 A 1 HETATM 2 O O1 A5P . . . D 3 35.429 50.512 17.287 1 52.06 ? O1 A5P 1269 A 1 HETATM 3 C C2 A5P . . . D 3 35.272 52.694 18.146 1 50.44 ? C2 A5P 1269 A 1 HETATM 4 O O2 A5P . . . D 3 33.959 52.842 18.678 1 54.36 ? O2 A5P 1269 A 1 HETATM 5 C C3 A5P . . . D 3 36.659 53.332 18.217 1 49.8 ? C3 A5P 1269 A 1 HETATM 6 O O3 A5P . . . D 3 37.511 53.143 19.352 1 47.45 ? O3 A5P 1269 A 1 HETATM 7 C C4 A5P . . . D 3 36.38 54.752 17.73 1 47.83 ? C4 A5P 1269 A 1 HETATM 8 O O4 A5P . . . D 3 35.195 55.25 17.104 1 52.15 ? O4 A5P 1269 A 1 HETATM 9 C C5 A5P . . . D 3 36.972 54.718 16.328 1 44.78 ? C5 A5P 1269 A 1 HETATM 10 O O5 A5P . . . D 3 38.384 54.815 16.436 1 40 ? O5 A5P 1269 A 1 HETATM 11 P P A5P . . . D 3 39.384 55.643 15.529 1 36.59 ? P A5P 1269 A 1 HETATM 12 O O1P A5P . . . D 3 40.714 55.333 16.123 1 37.25 ? O1P A5P 1269 A 1 HETATM 13 O O2P A5P . . . D 3 39.233 55.125 14.151 1 35.21 ? O2P A5P 1269 A 1 HETATM 14 O O3P A5P . . . D 3 39.011 57.073 15.665 1 35.89 ? O3P A5P 1269 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 142 _model_server_stats.query_time_ms 576 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 14 #