data_1G0H # _model_server_result.job_id dlaR3C-i4JNhtNBc9F253g _model_server_result.datetime_utc '2024-10-20 19:52:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1g0h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":292}' # _entry.id 1G0H # _exptl.entry_id 1G0H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 258.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-MYO-INOSITOL-1-PHOSPHATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1G0H _cell.length_a 65.18 _cell.length_b 75.89 _cell.length_c 131.81 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1G0H _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 65 A GLU 65 1_555 C CA CA . A CA 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc2 A OE1 GLU 65 A GLU 65 1_555 D CA CA . A CA 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc3 A OE2 GLU 65 A GLU 65 1_555 D CA CA . A CA 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc4 A OD1 ASP 81 A ASP 81 1_555 C CA CA . A CA 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc5 A OD2 ASP 81 A ASP 81 1_555 D CA CA . A CA 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc6 A O ILE 83 A ILE 83 1_555 D CA CA . A CA 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc7 A OD1 ASP 84 A ASP 84 1_555 C CA CA . A CA 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc8 A OD1 ASP 201 A ASP 201 1_555 C CA CA . A CA 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc9 C CA CA . A CA 290 1_555 E O7 IPD . A IPD 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.931 ? metalc ? metalc10 C CA CA . A CA 290 1_555 E O1 IPD . A IPD 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc11 D CA CA . A CA 291 1_555 E O7 IPD . A IPD 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc12 D CA CA . A CA 291 1_555 I O HOH . A HOH 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc13 D CA CA . A CA 291 1_555 I O HOH . A HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc14 B OE2 GLU 65 B GLU 365 1_555 F CA CA . B CA 590 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.385 ? metalc ? metalc15 B OE1 GLU 65 B GLU 365 1_555 F CA CA . B CA 590 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.869 ? metalc ? metalc16 B OE2 GLU 65 B GLU 365 1_555 G CA CA . B CA 591 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc17 B OD1 ASP 81 B ASP 381 1_555 F CA CA . B CA 590 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? metalc ? metalc18 B OD2 ASP 81 B ASP 381 1_555 F CA CA . B CA 590 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc19 B OD1 ASP 81 B ASP 381 1_555 G CA CA . B CA 591 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc20 B O ILE 83 B ILE 383 1_555 F CA CA . B CA 590 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc21 B OD1 ASP 84 B ASP 384 1_555 G CA CA . B CA 591 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc22 B OD1 ASP 201 B ASP 501 1_555 G CA CA . B CA 591 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc23 F CA CA . B CA 590 1_555 H O7 IPD . B IPD 592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc24 G CA CA . B CA 591 1_555 H O7 IPD . B IPD 592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.9 ? metalc ? metalc25 G CA CA . B CA 591 1_555 H O1 IPD . B IPD 592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc26 G CA CA . B CA 591 1_555 H O2 IPD . B IPD 592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.33 ? # _chem_comp.formula 'C6 H11 O9 P -2' _chem_comp.formula_weight 258.12 _chem_comp.id IPD _chem_comp.mon_nstd_flag . _chem_comp.name D-MYO-INOSITOL-1-PHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPD sing 133 n n C1 C6 IPD sing 134 n n C1 O1 IPD sing 135 n n C1 H1 IPD sing 136 n n C2 C3 IPD sing 137 n n C2 O2 IPD sing 138 n n C2 H2 IPD sing 139 n n C3 C4 IPD sing 140 n n C3 O3 IPD sing 141 n n C3 H3 IPD sing 142 n n C4 C5 IPD sing 143 n n C4 O4 IPD sing 144 n n C4 H4 IPD sing 145 n n C5 C6 IPD sing 146 n n C5 O5 IPD sing 147 n n C5 H5 IPD sing 148 n n C6 O6 IPD sing 149 n n C6 H6 IPD sing 150 n n P1 O1 IPD sing 151 n n P1 O7 IPD doub 152 n n P1 O8 IPD sing 153 n n P1 O9 IPD sing 154 n n O2 HO2 IPD sing 155 n n O3 HO3 IPD sing 156 n n O4 HO4 IPD sing 157 n n O5 HO5 IPD sing 158 n n O6 HO6 IPD sing 159 n n # _atom_sites.entry_id 1G0H _atom_sites.fract_transf_matrix[1][1] 0.015342 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013177 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007587 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 290 290 CA IUM . D 2 CA A 1 291 291 CA IUM . E 3 IPD A 1 292 292 IPD IPD . F 2 CA B 1 590 590 CA IUM . G 2 CA B 1 591 591 CA IUM . H 3 IPD B 1 592 592 IPD IPD . I 4 HOH A 1 601 601 HOH HOH . I 4 HOH A 2 604 604 HOH HOH . I 4 HOH A 3 611 611 HOH HOH . I 4 HOH A 4 612 612 HOH HOH . I 4 HOH A 5 613 613 HOH HOH . I 4 HOH A 6 614 614 HOH HOH . I 4 HOH A 7 615 615 HOH HOH . I 4 HOH A 8 617 617 HOH HOH . I 4 HOH A 9 618 618 HOH HOH . I 4 HOH A 10 619 619 HOH HOH . I 4 HOH A 11 620 620 HOH HOH . I 4 HOH A 12 621 621 HOH HOH . I 4 HOH A 13 624 624 HOH HOH . I 4 HOH A 14 625 625 HOH HOH . I 4 HOH A 15 626 626 HOH HOH . I 4 HOH A 16 627 627 HOH HOH . I 4 HOH A 17 629 629 HOH HOH . I 4 HOH A 18 630 630 HOH HOH . I 4 HOH A 19 631 631 HOH HOH . I 4 HOH A 20 632 632 HOH HOH . I 4 HOH A 21 633 633 HOH HOH . I 4 HOH A 22 634 634 HOH HOH . I 4 HOH A 23 635 635 HOH HOH . I 4 HOH A 24 636 636 HOH HOH . I 4 HOH A 25 637 637 HOH HOH . I 4 HOH A 26 638 638 HOH HOH . I 4 HOH A 27 640 640 HOH HOH . I 4 HOH A 28 641 641 HOH HOH . I 4 HOH A 29 643 643 HOH HOH . I 4 HOH A 30 644 644 HOH HOH . I 4 HOH A 31 645 645 HOH HOH . I 4 HOH A 32 646 646 HOH HOH . I 4 HOH A 33 664 664 HOH HOH . I 4 HOH A 34 665 665 HOH HOH . I 4 HOH A 35 678 678 HOH HOH . J 4 HOH B 1 602 602 HOH HOH . J 4 HOH B 2 603 603 HOH HOH . J 4 HOH B 3 605 605 HOH HOH . J 4 HOH B 4 606 606 HOH HOH . J 4 HOH B 5 607 607 HOH HOH . J 4 HOH B 6 608 608 HOH HOH . J 4 HOH B 7 609 609 HOH HOH . J 4 HOH B 8 610 610 HOH HOH . J 4 HOH B 9 616 616 HOH HOH . J 4 HOH B 10 622 622 HOH HOH . J 4 HOH B 11 623 623 HOH HOH . J 4 HOH B 12 628 628 HOH HOH . J 4 HOH B 13 639 639 HOH HOH . J 4 HOH B 14 642 642 HOH HOH . J 4 HOH B 15 647 647 HOH HOH . J 4 HOH B 16 648 648 HOH HOH . J 4 HOH B 17 649 649 HOH HOH . J 4 HOH B 18 650 650 HOH HOH . J 4 HOH B 19 651 651 HOH HOH . J 4 HOH B 20 652 652 HOH HOH . J 4 HOH B 21 653 653 HOH HOH . J 4 HOH B 22 654 654 HOH HOH . J 4 HOH B 23 655 655 HOH HOH . J 4 HOH B 24 656 656 HOH HOH . J 4 HOH B 25 657 657 HOH HOH . J 4 HOH B 26 658 658 HOH HOH . J 4 HOH B 27 659 659 HOH HOH . J 4 HOH B 28 660 660 HOH HOH . J 4 HOH B 29 661 661 HOH HOH . J 4 HOH B 30 662 662 HOH HOH . J 4 HOH B 31 663 663 HOH HOH . J 4 HOH B 32 666 666 HOH HOH . J 4 HOH B 33 667 667 HOH HOH . J 4 HOH B 34 668 668 HOH HOH . J 4 HOH B 35 669 669 HOH HOH . J 4 HOH B 36 670 670 HOH HOH . J 4 HOH B 37 671 671 HOH HOH . J 4 HOH B 38 672 672 HOH HOH . J 4 HOH B 39 673 673 HOH HOH . J 4 HOH B 40 674 674 HOH HOH . J 4 HOH B 41 675 675 HOH HOH . J 4 HOH B 42 676 676 HOH HOH . J 4 HOH B 43 677 677 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPD . . . E 3 20.607 20.34 43.777 1 57.59 ? C1 IPD 292 A 1 HETATM 2 C C2 IPD . . . E 3 19.903 21.567 43.061 1 64.03 ? C2 IPD 292 A 1 HETATM 3 C C3 IPD . . . E 3 20.676 22.868 43.443 1 69.83 ? C3 IPD 292 A 1 HETATM 4 C C4 IPD . . . E 3 22.15 22.805 43.065 1 74.08 ? C4 IPD 292 A 1 HETATM 5 C C5 IPD . . . E 3 22.854 21.563 43.658 1 77.38 ? C5 IPD 292 A 1 HETATM 6 C C6 IPD . . . E 3 22.106 20.264 43.302 1 72.1 ? C6 IPD 292 A 1 HETATM 7 P P1 IPD . . . E 3 20.028 17.75 44.293 1 40.02 ? P1 IPD 292 A 1 HETATM 8 O O1 IPD . . . E 3 19.901 19.072 43.418 1 45.35 ? O1 IPD 292 A 1 HETATM 9 O O2 IPD . . . E 3 19.806 21.436 41.62 1 54.02 ? O2 IPD 292 A 1 HETATM 10 O O3 IPD . . . E 3 20.059 23.983 42.813 1 70.06 ? O3 IPD 292 A 1 HETATM 11 O O4 IPD . . . E 3 22.815 23.999 43.496 1 65.25 ? O4 IPD 292 A 1 HETATM 12 O O5 IPD . . . E 3 24.198 21.498 43.159 1 92.4 ? O5 IPD 292 A 1 HETATM 13 O O6 IPD . . . E 3 22.765 19.107 43.874 1 81.42 ? O6 IPD 292 A 1 HETATM 14 O O7 IPD . . . E 3 19.294 16.586 43.704 1 37.27 ? O7 IPD 292 A 1 HETATM 15 O O8 IPD . . . E 3 21.515 17.365 44.436 1 40.6 ? O8 IPD 292 A 1 HETATM 16 O O9 IPD . . . E 3 19.49 18.126 45.642 1 60.74 ? O9 IPD 292 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #