data_1G35 # _model_server_result.job_id 0mLnSl9aBtGlov7CYcj3bQ _model_server_result.datetime_utc '2025-02-27 02:13:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1g35 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 1G35 # _exptl.entry_id 1G35 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 664.765 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[4-(HYDROXY-METHOXY-METHYL)-BENZYL]-7-(4-HYDROXYMETHYL-BENZYL)-1,1-DIOXO-3,6-BIS-PHENOXYMETHYL-1LAMBDA6-[1,2,7]THIADIAZEPANE-4,5-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1G35 _cell.length_a 58.5 _cell.length_b 86.9 _cell.length_c 46.9 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1G35 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C35 H40 N2 O9 S' _chem_comp.formula_weight 664.765 _chem_comp.id AHF _chem_comp.mon_nstd_flag . _chem_comp.name 2-[4-(HYDROXY-METHOXY-METHYL)-BENZYL]-7-(4-HYDROXYMETHYL-BENZYL)-1,1-DIOXO-3,6-BIS-PHENOXYMETHYL-1LAMBDA6-[1,2,7]THIADIAZEPANE-4,5-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N01 S02 AHF sing 1 n n N01 C07 AHF sing 2 n n N01 C08 AHF sing 3 n n S02 N03 AHF sing 4 n n S02 O15 AHF doub 5 n n S02 O40 AHF doub 6 n n N03 C04 AHF sing 7 n n N03 C23 AHF sing 8 n n C04 C05 AHF sing 9 n n C04 C41 AHF sing 10 n n C04 H04 AHF sing 11 n n C05 C06 AHF sing 12 n n C05 O30 AHF sing 13 n n C05 H05 AHF sing 14 n n C06 C07 AHF sing 15 n n C06 O31 AHF sing 16 n n C06 H06 AHF sing 17 n n C07 C32 AHF sing 18 n n C07 H07 AHF sing 19 n n C08 C09 AHF sing 20 n n C08 H082 AHF sing 21 n n C08 H081 AHF sing 22 n n C09 C10 AHF doub 23 n y C09 C14 AHF sing 24 n y C10 C11 AHF sing 25 n y C10 H10 AHF sing 26 n n C11 C12 AHF doub 27 n y C11 H11 AHF sing 28 n n C12 C13 AHF sing 29 n y C12 C46 AHF sing 30 n n C13 C14 AHF doub 31 n y C13 H13 AHF sing 32 n n C14 H14 AHF sing 33 n n O16 C17 AHF sing 34 n n O16 C41 AHF sing 35 n n C17 C18 AHF doub 36 n y C17 C22 AHF sing 37 n y C18 C19 AHF sing 38 n y C18 H18 AHF sing 39 n n C19 C20 AHF doub 40 n y C19 H19 AHF sing 41 n n C20 C21 AHF sing 42 n y C20 H20 AHF sing 43 n n C21 C22 AHF doub 44 n y C21 H21 AHF sing 45 n n C22 H22 AHF sing 46 n n C23 C24 AHF sing 47 n n C23 H231 AHF sing 48 n n C23 H232 AHF sing 49 n n C24 C25 AHF doub 50 n y C24 C29 AHF sing 51 n y C25 C26 AHF sing 52 n y C25 H25 AHF sing 53 n n C26 C27 AHF doub 54 n y C26 H26 AHF sing 55 n n C27 C28 AHF sing 56 n y C27 C42 AHF sing 57 n n C28 C29 AHF doub 58 n y C28 H28 AHF sing 59 n n C29 H29 AHF sing 60 n n O30 HO3 AHF sing 61 n n O31 HO1 AHF sing 62 n n C32 O33 AHF sing 63 n n C32 H321 AHF sing 64 n n C32 H322 AHF sing 65 n n O33 C34 AHF sing 66 n n C34 C35 AHF doub 67 n y C34 C39 AHF sing 68 n y C35 C36 AHF sing 69 n y C35 H35 AHF sing 70 n n C36 C37 AHF doub 71 n y C36 H36 AHF sing 72 n n C37 C38 AHF sing 73 n y C37 H37 AHF sing 74 n n C38 C39 AHF doub 75 n y C38 H38 AHF sing 76 n n C39 H39 AHF sing 77 n n C41 H411 AHF sing 78 n n C41 H412 AHF sing 79 n n C42 O43 AHF sing 80 n n C42 O44 AHF sing 81 n n C42 H42 AHF sing 82 n n O43 C45 AHF sing 83 n n O44 HO4 AHF sing 84 n n C45 H451 AHF sing 85 n n C45 H452 AHF sing 86 n n C45 H453 AHF sing 87 n n C46 O47 AHF sing 88 n n C46 H461 AHF sing 89 n n C46 H462 AHF sing 90 n n O47 HO7 AHF sing 91 n n # _atom_sites.entry_id 1G35 _atom_sites.fract_transf_matrix[1][1] 0.017094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011507 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021322 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AHF B 1 501 501 AHF AHF . D 3 HOH A 1 602 602 HOH HOH . D 3 HOH A 2 603 603 HOH HOH . D 3 HOH A 3 609 609 HOH HOH . D 3 HOH A 4 610 610 HOH HOH . D 3 HOH A 5 613 613 HOH HOH . D 3 HOH A 6 616 616 HOH HOH . D 3 HOH A 7 618 618 HOH HOH . D 3 HOH A 8 620 620 HOH HOH . D 3 HOH A 9 623 623 HOH HOH . D 3 HOH A 10 624 624 HOH HOH . D 3 HOH A 11 625 625 HOH HOH . D 3 HOH A 12 628 628 HOH HOH . D 3 HOH A 13 629 629 HOH HOH . D 3 HOH A 14 635 635 HOH HOH . D 3 HOH A 15 638 638 HOH HOH . D 3 HOH A 16 639 639 HOH HOH . D 3 HOH A 17 644 644 HOH HOH . D 3 HOH A 18 645 645 HOH HOH . D 3 HOH A 19 648 648 HOH HOH . D 3 HOH A 20 649 649 HOH HOH . D 3 HOH A 21 651 651 HOH HOH . D 3 HOH A 22 653 653 HOH HOH . D 3 HOH A 23 656 656 HOH HOH . D 3 HOH A 24 658 658 HOH HOH . D 3 HOH A 25 659 659 HOH HOH . D 3 HOH A 26 661 661 HOH HOH . D 3 HOH A 27 662 662 HOH HOH . D 3 HOH A 28 665 665 HOH HOH . D 3 HOH A 29 666 666 HOH HOH . D 3 HOH A 30 674 674 HOH HOH . D 3 HOH A 31 675 675 HOH HOH . D 3 HOH A 32 676 676 HOH HOH . D 3 HOH A 33 678 678 HOH HOH . D 3 HOH A 34 679 679 HOH HOH . D 3 HOH A 35 680 680 HOH HOH . D 3 HOH A 36 687 687 HOH HOH . D 3 HOH A 37 688 688 HOH HOH . D 3 HOH A 38 690 690 HOH HOH . D 3 HOH A 39 693 693 HOH HOH . D 3 HOH A 40 697 697 HOH HOH . D 3 HOH A 41 700 700 HOH HOH . D 3 HOH A 42 704 704 HOH HOH . D 3 HOH A 43 706 706 HOH HOH . D 3 HOH A 44 716 716 HOH HOH . D 3 HOH A 45 717 717 HOH HOH . D 3 HOH A 46 718 718 HOH HOH . D 3 HOH A 47 719 719 HOH HOH . D 3 HOH A 48 720 720 HOH HOH . D 3 HOH A 49 721 721 HOH HOH . D 3 HOH A 50 722 722 HOH HOH . D 3 HOH A 51 723 723 HOH HOH . D 3 HOH A 52 724 724 HOH HOH . D 3 HOH A 53 726 726 HOH HOH . D 3 HOH A 54 730 730 HOH HOH . D 3 HOH A 55 731 731 HOH HOH . D 3 HOH A 56 732 732 HOH HOH . D 3 HOH A 57 736 736 HOH HOH . D 3 HOH A 58 737 737 HOH HOH . D 3 HOH A 59 743 743 HOH HOH . D 3 HOH A 60 744 744 HOH HOH . E 3 HOH B 1 601 601 HOH HOH . E 3 HOH B 2 604 604 HOH HOH . E 3 HOH B 3 605 605 HOH HOH . E 3 HOH B 4 606 606 HOH HOH . E 3 HOH B 5 607 607 HOH HOH . E 3 HOH B 6 608 608 HOH HOH . E 3 HOH B 7 611 611 HOH HOH . E 3 HOH B 8 612 612 HOH HOH . E 3 HOH B 9 614 614 HOH HOH . E 3 HOH B 10 615 615 HOH HOH . E 3 HOH B 11 617 617 HOH HOH . E 3 HOH B 12 619 619 HOH HOH . E 3 HOH B 13 621 621 HOH HOH . E 3 HOH B 14 622 622 HOH HOH . E 3 HOH B 15 626 626 HOH HOH . E 3 HOH B 16 627 627 HOH HOH . E 3 HOH B 17 630 630 HOH HOH . E 3 HOH B 18 631 631 HOH HOH . E 3 HOH B 19 632 632 HOH HOH . E 3 HOH B 20 633 633 HOH HOH . E 3 HOH B 21 634 634 HOH HOH . E 3 HOH B 22 636 636 HOH HOH . E 3 HOH B 23 637 637 HOH HOH . E 3 HOH B 24 640 640 HOH HOH . E 3 HOH B 25 641 641 HOH HOH . E 3 HOH B 26 642 642 HOH HOH . E 3 HOH B 27 643 643 HOH HOH . E 3 HOH B 28 646 646 HOH HOH . E 3 HOH B 29 647 647 HOH HOH . E 3 HOH B 30 650 650 HOH HOH . E 3 HOH B 31 652 652 HOH HOH . E 3 HOH B 32 654 654 HOH HOH . E 3 HOH B 33 655 655 HOH HOH . E 3 HOH B 34 657 657 HOH HOH . E 3 HOH B 35 660 660 HOH HOH . E 3 HOH B 36 663 663 HOH HOH . E 3 HOH B 37 664 664 HOH HOH . E 3 HOH B 38 667 667 HOH HOH . E 3 HOH B 39 668 668 HOH HOH . E 3 HOH B 40 669 669 HOH HOH . E 3 HOH B 41 670 670 HOH HOH . E 3 HOH B 42 671 671 HOH HOH . E 3 HOH B 43 672 672 HOH HOH . E 3 HOH B 44 673 673 HOH HOH . E 3 HOH B 45 677 677 HOH HOH . E 3 HOH B 46 681 681 HOH HOH . E 3 HOH B 47 682 682 HOH HOH . E 3 HOH B 48 683 683 HOH HOH . E 3 HOH B 49 684 684 HOH HOH . E 3 HOH B 50 685 685 HOH HOH . E 3 HOH B 51 686 686 HOH HOH . E 3 HOH B 52 689 689 HOH HOH . E 3 HOH B 53 691 691 HOH HOH . E 3 HOH B 54 692 692 HOH HOH . E 3 HOH B 55 694 694 HOH HOH . E 3 HOH B 56 695 695 HOH HOH . E 3 HOH B 57 696 696 HOH HOH . E 3 HOH B 58 698 698 HOH HOH . E 3 HOH B 59 699 699 HOH HOH . E 3 HOH B 60 701 701 HOH HOH . E 3 HOH B 61 702 702 HOH HOH . E 3 HOH B 62 705 705 HOH HOH . E 3 HOH B 63 707 707 HOH HOH . E 3 HOH B 64 708 708 HOH HOH . E 3 HOH B 65 709 709 HOH HOH . E 3 HOH B 66 710 710 HOH HOH . E 3 HOH B 67 711 711 HOH HOH . E 3 HOH B 68 712 712 HOH HOH . E 3 HOH B 69 713 713 HOH HOH . E 3 HOH B 70 714 714 HOH HOH . E 3 HOH B 71 715 715 HOH HOH . E 3 HOH B 72 725 725 HOH HOH . E 3 HOH B 73 727 727 HOH HOH . E 3 HOH B 74 728 728 HOH HOH . E 3 HOH B 75 729 729 HOH HOH . E 3 HOH B 76 733 733 HOH HOH . E 3 HOH B 77 734 734 HOH HOH . E 3 HOH B 78 735 735 HOH HOH . E 3 HOH B 79 738 738 HOH HOH . E 3 HOH B 80 739 739 HOH HOH . E 3 HOH B 81 740 740 HOH HOH . E 3 HOH B 82 741 741 HOH HOH . E 3 HOH B 83 742 742 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 AHF . . . C 2 11.594 23.922 6.163 1 24.37 ? N01 AHF 501 B 1 HETATM 2 S S02 AHF . . . C 2 11.941 22.288 6.477 1 23.69 ? S02 AHF 501 B 1 HETATM 3 N N03 AHF . . . C 2 13.61 22.422 6.259 1 24.06 ? N03 AHF 501 B 1 HETATM 4 C C04 AHF . . . C 2 14.023 22.301 4.841 1 23.34 ? C04 AHF 501 B 1 HETATM 5 C C05 AHF . . . C 2 14.158 23.776 4.298 1 23.4 ? C05 AHF 501 B 1 HETATM 6 C C06 AHF . . . C 2 13.187 24.863 4.869 1 23.25 ? C06 AHF 501 B 1 HETATM 7 C C07 AHF . . . C 2 11.681 24.634 4.856 1 24.34 ? C07 AHF 501 B 1 HETATM 8 C C08 AHF . . . C 2 10.312 24.239 6.727 1 28.37 ? C08 AHF 501 B 1 HETATM 9 C C09 AHF . . . C 2 9.736 25.45 7.351 1 24.76 ? C09 AHF 501 B 1 HETATM 10 C C10 AHF . . . C 2 8.341 25.748 7.178 1 26.51 ? C10 AHF 501 B 1 HETATM 11 C C11 AHF . . . C 2 7.767 26.912 7.771 1 26.11 ? C11 AHF 501 B 1 HETATM 12 C C12 AHF . . . C 2 8.614 27.816 8.567 1 29.46 ? C12 AHF 501 B 1 HETATM 13 C C13 AHF . . . C 2 10.049 27.518 8.751 1 26.08 ? C13 AHF 501 B 1 HETATM 14 C C14 AHF . . . C 2 10.601 26.326 8.135 1 26.94 ? C14 AHF 501 B 1 HETATM 15 O O15 AHF . . . C 2 11.308 21.469 5.461 1 22.54 ? O15 AHF 501 B 1 HETATM 16 O O16 AHF . . . C 2 15.016 20.468 3.576 1 25.09 ? O16 AHF 501 B 1 HETATM 17 C C17 AHF . . . C 2 15.955 19.495 3.261 1 26.69 ? C17 AHF 501 B 1 HETATM 18 C C18 AHF . . . C 2 16.157 19.12 1.877 1 25.62 ? C18 AHF 501 B 1 HETATM 19 C C19 AHF . . . C 2 17.149 18.094 1.523 1 27.16 ? C19 AHF 501 B 1 HETATM 20 C C20 AHF . . . C 2 17.943 17.441 2.564 1 24.15 ? C20 AHF 501 B 1 HETATM 21 C C21 AHF . . . C 2 17.753 17.801 3.951 1 26.88 ? C21 AHF 501 B 1 HETATM 22 C C22 AHF . . . C 2 16.762 18.825 4.305 1 26.21 ? C22 AHF 501 B 1 HETATM 23 C C23 AHF . . . C 2 14.508 22.802 7.411 1 26.26 ? C23 AHF 501 B 1 HETATM 24 C C24 AHF . . . C 2 15.413 21.902 8.178 1 29.61 ? C24 AHF 501 B 1 HETATM 25 C C25 AHF . . . C 2 14.881 20.953 9.143 1 31.33 ? C25 AHF 501 B 1 HETATM 26 C C26 AHF . . . C 2 15.805 20.076 9.902 1 33.61 ? C26 AHF 501 B 1 HETATM 27 C C27 AHF . . . C 2 17.27 20.16 9.687 1 34.58 ? C27 AHF 501 B 1 HETATM 28 C C28 AHF . . . C 2 17.794 21.132 8.698 1 32.2 ? C28 AHF 501 B 1 HETATM 29 C C29 AHF . . . C 2 16.863 21.99 7.957 1 30.47 ? C29 AHF 501 B 1 HETATM 30 O O30 AHF . . . C 2 15.424 24.325 4.512 1 21.81 ? O30 AHF 501 B 1 HETATM 31 O O31 AHF . . . C 2 13.421 26.016 4.176 1 23.74 ? O31 AHF 501 B 1 HETATM 32 C C32 AHF . . . C 2 11.127 23.823 3.607 1 23.58 ? C32 AHF 501 B 1 HETATM 33 O O33 AHF . . . C 2 9.707 23.725 3.747 1 24.51 ? O33 AHF 501 B 1 HETATM 34 C C34 AHF . . . C 2 8.769 24.46 3.176 1 23.12 ? C34 AHF 501 B 1 HETATM 35 C C35 AHF . . . C 2 9.091 25.556 2.241 1 20.58 ? C35 AHF 501 B 1 HETATM 36 C C36 AHF . . . C 2 8.04 26.337 1.634 1 21.31 ? C36 AHF 501 B 1 HETATM 37 C C37 AHF . . . C 2 6.659 26.034 1.953 1 23.51 ? C37 AHF 501 B 1 HETATM 38 C C38 AHF . . . C 2 6.338 24.961 2.87 1 23.01 ? C38 AHF 501 B 1 HETATM 39 C C39 AHF . . . C 2 7.395 24.177 3.479 1 21.61 ? C39 AHF 501 B 1 HETATM 40 O O40 AHF . . . C 2 11.737 22.006 7.833 1 25.65 ? O40 AHF 501 B 1 HETATM 41 C C41 AHF . . . C 2 15.336 21.479 4.61 1 26.46 ? C41 AHF 501 B 1 HETATM 42 C C42 AHF . . . C 2 18.106 19.372 10.374 1 37.11 ? C42 AHF 501 B 1 HETATM 43 O O43 AHF . . . C 2 17.702 18.805 11.552 1 40.31 ? O43 AHF 501 B 1 HETATM 44 O O44 AHF . . . C 2 19.341 19.148 9.916 1 39.64 ? O44 AHF 501 B 1 HETATM 45 C C45 AHF . . . C 2 18.54 18 12.286 1 40.84 ? C45 AHF 501 B 1 HETATM 46 C C46 AHF . . . C 2 8.147 28.853 9.111 1 30.91 ? C46 AHF 501 B 1 HETATM 47 O O47 AHF . . . C 2 7.648 29.675 8.176 1 35.23 ? O47 AHF 501 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 51 _model_server_stats.query_time_ms 739 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 47 #