data_1G3I
#
_model_server_result.job_id            4F2P9gQsYnL5SN1Ubx9o-g 
_model_server_result.datetime_utc      '2025-02-27 18:49:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1g3i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"JA","auth_seq_id":461}' 
#
_entry.id    1G3I 
#
_exptl.entry_id    1G3I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1G3I 
_cell.length_a            209.223 
_cell.length_b            220.579 
_cell.length_c            241.07 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1G3I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    24-meric 
_pdbx_struct_assembly.oligomeric_count      24 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 Y N N 
? 3 Z N N 
? 3 AA N N 
? 3 BA N N 
? 3 CA N N 
? 3 DA N N 
? 3 EA N N 
? 3 FA N N 
? 3 GA N N 
? 3 HA N N 
? 3 IA N N 
? 3 JA N N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     1G3I 
_atom_sites.fract_transf_matrix[1][1]    0.00478 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004534 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004148 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
Y 3 ATP A 1 450 450 ATP ATP . 
Z 3 ATP B 1 451 450 ATP ATP . 
AA 3 ATP C 1 452 450 ATP ATP . 
BA 3 ATP D 1 453 450 ATP ATP . 
CA 3 ATP E 1 454 450 ATP ATP . 
DA 3 ATP F 1 455 450 ATP ATP . 
EA 3 ATP S 1 456 450 ATP ATP . 
FA 3 ATP T 1 457 450 ATP ATP . 
GA 3 ATP U 1 458 450 ATP ATP . 
HA 3 ATP V 1 459 450 ATP ATP . 
IA 3 ATP W 1 460 450 ATP ATP . 
JA 3 ATP X 1 461 450 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . JA 3 182.641 98.319 15.502 1 163.31 ? PG ATP 461 X 1 
HETATM 2 O O1G ATP . . . JA 3 181.18 98.664 15.662 1 162.85 ? O1G ATP 461 X 1 
HETATM 3 O O2G ATP . . . JA 3 183.276 97.541 16.631 1 162.82 ? O2G ATP 461 X 1 
HETATM 4 O O3G ATP . . . JA 3 183.099 97.974 14.104 1 163.95 ? O3G ATP 461 X 1 
HETATM 5 P PB ATP . . . JA 3 184.758 100.336 15.25 1 161.15 ? PB ATP 461 X 1 
HETATM 6 O O1B ATP . . . JA 3 185.396 101.09 16.391 1 161.28 ? O1B ATP 461 X 1 
HETATM 7 O O2B ATP . . . JA 3 185.499 99.197 14.593 1 162.21 ? O2B ATP 461 X 1 
HETATM 8 O O3B ATP . . . JA 3 183.323 99.765 15.702 1 162.2 ? O3B ATP 461 X 1 
HETATM 9 P PA ATP . . . JA 3 183.398 101.266 12.843 1 157.93 ? PA ATP 461 X 1 
HETATM 10 O O1A ATP . . . JA 3 181.984 101.222 13.36 1 158.72 ? O1A ATP 461 X 1 
HETATM 11 O O2A ATP . . . JA 3 183.907 100.153 11.963 1 158.15 ? O2A ATP 461 X 1 
HETATM 12 O O3A ATP . . . JA 3 184.365 101.398 14.115 1 159.25 ? O3A ATP 461 X 1 
HETATM 13 O O5' ATP . . . JA 3 183.625 102.657 12.105 1 169.59 ? O5' ATP 461 X 1 
HETATM 14 C C5' ATP . . . JA 3 182.963 102.959 10.882 1 166.37 ? C5' ATP 461 X 1 
HETATM 15 C C4' ATP . . . JA 3 181.985 104.085 11.099 1 163.71 ? C4' ATP 461 X 1 
HETATM 16 O O4' ATP . . . JA 3 182.491 104.935 12.157 1 161.8 ? O4' ATP 461 X 1 
HETATM 17 C C3' ATP . . . JA 3 181.757 104.991 9.899 1 162.79 ? C3' ATP 461 X 1 
HETATM 18 O O3' ATP . . . JA 3 180.433 105.518 9.923 1 162.88 ? O3' ATP 461 X 1 
HETATM 19 C C2' ATP . . . JA 3 182.821 106.072 10.101 1 161.06 ? C2' ATP 461 X 1 
HETATM 20 O O2' ATP . . . JA 3 182.471 107.314 9.516 1 160.56 ? O2' ATP 461 X 1 
HETATM 21 C C1' ATP . . . JA 3 182.877 106.187 11.627 1 159.62 ? C1' ATP 461 X 1 
HETATM 22 N N9 ATP . . . JA 3 184.217 106.466 12.144 1 157.05 ? N9 ATP 461 X 1 
HETATM 23 C C8 ATP . . . JA 3 184.962 105.641 12.948 1 156.12 ? C8 ATP 461 X 1 
HETATM 24 N N7 ATP . . . JA 3 186.133 106.13 13.271 1 155.29 ? N7 ATP 461 X 1 
HETATM 25 C C5 ATP . . . JA 3 186.164 107.362 12.639 1 154.97 ? C5 ATP 461 X 1 
HETATM 26 C C6 ATP . . . JA 3 187.133 108.37 12.596 1 154.35 ? C6 ATP 461 X 1 
HETATM 27 N N6 ATP . . . JA 3 188.301 108.3 13.233 1 152.11 ? N6 ATP 461 X 1 
HETATM 28 N N1 ATP . . . JA 3 186.858 109.472 11.871 1 154.95 ? N1 ATP 461 X 1 
HETATM 29 C C2 ATP . . . JA 3 185.681 109.544 11.24 1 154.94 ? C2 ATP 461 X 1 
HETATM 30 N N3 ATP . . . JA 3 184.683 108.667 11.211 1 154.38 ? N3 ATP 461 X 1 
HETATM 31 C C4 ATP . . . JA 3 184.99 107.582 11.938 1 155.67 ? C4 ATP 461 X 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    51 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#