data_1G5Q # _model_server_result.job_id e2wUpD57YICILYhRY87tVQ _model_server_result.datetime_utc '2024-11-16 06:49:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1g5q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":402}' # _entry.id 1G5Q # _exptl.entry_id 1G5Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1G5Q _cell.length_a 223.552 _cell.length_b 223.552 _cell.length_c 223.552 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1G5Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 21 3' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_645 -z+1,x-1/2,-y+1/2 0 0 -1 1 0 0 0 -1 0 223.552 -111.776 111.776 3 'crystal symmetry operation' 11_556 y+1/2,-z+1/2,-x+1 0 1 0 0 0 -1 -1 0 0 111.776 111.776 223.552 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 M N N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 388 n n C C2 TRS sing 389 n n C C3 TRS sing 390 n n C N TRS sing 391 n n C1 O1 TRS sing 392 n n C1 H11 TRS sing 393 n n C1 H12 TRS sing 394 n n C2 O2 TRS sing 395 n n C2 H21 TRS sing 396 n n C2 H22 TRS sing 397 n n C3 O3 TRS sing 398 n n C3 H31 TRS sing 399 n n C3 H32 TRS sing 400 n n N HN1 TRS sing 401 n n N HN2 TRS sing 402 n n N HN3 TRS sing 403 n n O1 HO1 TRS sing 404 n n O2 HO2 TRS sing 405 n n O3 HO3 TRS sing 406 n n # _atom_sites.entry_id 1G5Q _atom_sites.fract_transf_matrix[1][1] 0.004473 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004473 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004473 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 FMN A 1 300 300 FMN FMN . J 4 TRS A 1 402 2 TRS TRS . K 3 FMN D 1 301 300 FMN FMN . L 3 FMN G 1 302 300 FMN FMN . M 4 TRS G 1 401 1 TRS TRS . N 3 FMN L 1 303 300 FMN FMN . O 5 HOH A 1 403 5 HOH HOH . O 5 HOH A 2 404 9 HOH HOH . O 5 HOH A 3 405 17 HOH HOH . O 5 HOH A 4 406 28 HOH HOH . O 5 HOH A 5 407 29 HOH HOH . O 5 HOH A 6 408 30 HOH HOH . O 5 HOH A 7 409 32 HOH HOH . O 5 HOH A 8 410 38 HOH HOH . O 5 HOH A 9 411 41 HOH HOH . O 5 HOH A 10 412 47 HOH HOH . O 5 HOH A 11 413 48 HOH HOH . O 5 HOH A 12 414 51 HOH HOH . O 5 HOH A 13 415 55 HOH HOH . O 5 HOH A 14 416 56 HOH HOH . O 5 HOH A 15 417 57 HOH HOH . O 5 HOH A 16 418 60 HOH HOH . O 5 HOH A 17 419 67 HOH HOH . O 5 HOH A 18 420 75 HOH HOH . O 5 HOH A 19 421 76 HOH HOH . O 5 HOH A 20 422 79 HOH HOH . O 5 HOH A 21 423 86 HOH HOH . O 5 HOH A 22 424 109 HOH HOH . O 5 HOH A 23 425 114 HOH HOH . O 5 HOH A 24 426 119 HOH HOH . O 5 HOH A 25 427 120 HOH HOH . O 5 HOH A 26 428 129 HOH HOH . O 5 HOH A 27 429 130 HOH HOH . O 5 HOH A 28 430 133 HOH HOH . O 5 HOH A 29 431 136 HOH HOH . P 5 HOH D 1 302 1 HOH HOH . P 5 HOH D 2 303 4 HOH HOH . P 5 HOH D 3 304 10 HOH HOH . P 5 HOH D 4 305 11 HOH HOH . P 5 HOH D 5 306 12 HOH HOH . P 5 HOH D 6 307 19 HOH HOH . P 5 HOH D 7 308 21 HOH HOH . P 5 HOH D 8 309 22 HOH HOH . P 5 HOH D 9 310 25 HOH HOH . P 5 HOH D 10 311 31 HOH HOH . P 5 HOH D 11 312 33 HOH HOH . P 5 HOH D 12 313 34 HOH HOH . P 5 HOH D 13 314 42 HOH HOH . P 5 HOH D 14 315 43 HOH HOH . P 5 HOH D 15 316 45 HOH HOH . P 5 HOH D 16 317 49 HOH HOH . P 5 HOH D 17 318 50 HOH HOH . P 5 HOH D 18 319 53 HOH HOH . P 5 HOH D 19 320 59 HOH HOH . P 5 HOH D 20 321 64 HOH HOH . P 5 HOH D 21 322 65 HOH HOH . P 5 HOH D 22 323 66 HOH HOH . P 5 HOH D 23 324 68 HOH HOH . P 5 HOH D 24 325 72 HOH HOH . P 5 HOH D 25 326 80 HOH HOH . P 5 HOH D 26 327 81 HOH HOH . P 5 HOH D 27 328 82 HOH HOH . P 5 HOH D 28 329 83 HOH HOH . P 5 HOH D 29 330 85 HOH HOH . P 5 HOH D 30 331 87 HOH HOH . P 5 HOH D 31 332 88 HOH HOH . P 5 HOH D 32 333 89 HOH HOH . P 5 HOH D 33 334 92 HOH HOH . P 5 HOH D 34 335 96 HOH HOH . P 5 HOH D 35 336 97 HOH HOH . P 5 HOH D 36 337 98 HOH HOH . P 5 HOH D 37 338 99 HOH HOH . P 5 HOH D 38 339 101 HOH HOH . P 5 HOH D 39 340 105 HOH HOH . P 5 HOH D 40 341 112 HOH HOH . P 5 HOH D 41 342 113 HOH HOH . P 5 HOH D 42 343 115 HOH HOH . P 5 HOH D 43 344 117 HOH HOH . P 5 HOH D 44 345 121 HOH HOH . P 5 HOH D 45 346 122 HOH HOH . P 5 HOH D 46 347 124 HOH HOH . P 5 HOH D 47 348 132 HOH HOH . Q 5 HOH G 1 402 2 HOH HOH . Q 5 HOH G 2 403 3 HOH HOH . Q 5 HOH G 3 404 8 HOH HOH . Q 5 HOH G 4 405 13 HOH HOH . Q 5 HOH G 5 406 15 HOH HOH . Q 5 HOH G 6 407 16 HOH HOH . Q 5 HOH G 7 408 27 HOH HOH . Q 5 HOH G 8 409 36 HOH HOH . Q 5 HOH G 9 410 52 HOH HOH . Q 5 HOH G 10 411 54 HOH HOH . Q 5 HOH G 11 412 61 HOH HOH . Q 5 HOH G 12 413 62 HOH HOH . Q 5 HOH G 13 414 63 HOH HOH . Q 5 HOH G 14 415 71 HOH HOH . Q 5 HOH G 15 416 74 HOH HOH . Q 5 HOH G 16 417 77 HOH HOH . Q 5 HOH G 17 418 84 HOH HOH . Q 5 HOH G 18 419 100 HOH HOH . Q 5 HOH G 19 420 102 HOH HOH . Q 5 HOH G 20 421 107 HOH HOH . Q 5 HOH G 21 422 111 HOH HOH . Q 5 HOH G 22 423 123 HOH HOH . Q 5 HOH G 23 424 125 HOH HOH . Q 5 HOH G 24 425 126 HOH HOH . Q 5 HOH G 25 426 128 HOH HOH . Q 5 HOH G 26 427 131 HOH HOH . Q 5 HOH G 27 428 135 HOH HOH . R 5 HOH O 1 35 35 HOH HOH . R 5 HOH O 2 44 44 HOH HOH . R 5 HOH O 3 46 46 HOH HOH . S 5 HOH L 1 304 6 HOH HOH . S 5 HOH L 2 305 7 HOH HOH . S 5 HOH L 3 306 14 HOH HOH . S 5 HOH L 4 307 18 HOH HOH . S 5 HOH L 5 308 20 HOH HOH . S 5 HOH L 6 309 23 HOH HOH . S 5 HOH L 7 310 26 HOH HOH . S 5 HOH L 8 311 37 HOH HOH . S 5 HOH L 9 312 39 HOH HOH . S 5 HOH L 10 313 40 HOH HOH . S 5 HOH L 11 314 58 HOH HOH . S 5 HOH L 12 315 69 HOH HOH . S 5 HOH L 13 316 70 HOH HOH . S 5 HOH L 14 317 73 HOH HOH . S 5 HOH L 15 318 78 HOH HOH . S 5 HOH L 16 319 90 HOH HOH . S 5 HOH L 17 320 91 HOH HOH . S 5 HOH L 18 321 93 HOH HOH . S 5 HOH L 19 322 94 HOH HOH . S 5 HOH L 20 323 95 HOH HOH . S 5 HOH L 21 324 103 HOH HOH . S 5 HOH L 22 325 104 HOH HOH . S 5 HOH L 23 326 106 HOH HOH . S 5 HOH L 24 327 108 HOH HOH . S 5 HOH L 25 328 110 HOH HOH . S 5 HOH L 26 329 116 HOH HOH . S 5 HOH L 27 330 118 HOH HOH . S 5 HOH L 28 331 127 HOH HOH . S 5 HOH L 29 332 134 HOH HOH . T 5 HOH P 1 24 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . J 4 190.777 78.843 32.779 0.33 56.61 ? C TRS 402 A 1 HETATM 2 C C1 TRS . . . J 4 192.237 78.388 32.777 0.33 56.2 ? C1 TRS 402 A 1 HETATM 3 C C2 TRS . . . J 4 190.294 78.729 31.477 0.33 56.42 ? C2 TRS 402 A 1 HETATM 4 C C3 TRS . . . J 4 190.767 80.25 33.376 0.33 56.25 ? C3 TRS 402 A 1 HETATM 5 N N TRS . . . J 4 190.002 77.942 33.643 0.33 56.47 ? N TRS 402 A 1 HETATM 6 O O1 TRS . . . J 4 192.998 79.16 33.58 0.33 57.12 ? O1 TRS 402 A 1 HETATM 7 O O2 TRS . . . J 4 191.061 78.015 30.573 0.33 57.6 ? O2 TRS 402 A 1 HETATM 8 O O3 TRS . . . J 4 189.974 81.195 32.724 0.33 56.94 ? O3 TRS 402 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 44 _model_server_stats.query_time_ms 520 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 8 #