data_1G5S # _model_server_result.job_id fhCkImG2wKifKpQTCURqwA _model_server_result.datetime_utc '2024-10-12 12:21:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1g5s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":400}' # _entry.id 1G5S # _exptl.entry_id 1G5S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 405.539 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[TRANS-(4-AMINOCYCLOHEXYL)AMINO]-6-(BENZYL-AMINO)-9-CYCLOPENTYLPURINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1G5S _cell.length_a 54.18 _cell.length_b 72.84 _cell.length_c 73.47 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1G5S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H31 N7' _chem_comp.formula_weight 405.539 _chem_comp.id I17 _chem_comp.mon_nstd_flag . _chem_comp.name 2-[TRANS-(4-AMINOCYCLOHEXYL)AMINO]-6-(BENZYL-AMINO)-9-CYCLOPENTYLPURINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 N9 I17 sing 152 n n C26 C30 I17 sing 153 n n C26 C27 I17 sing 154 n n C26 H261 I17 sing 155 n n N9 C4 I17 sing 156 n y N9 C8 I17 sing 157 n y C4 N3 I17 doub 158 n y C4 C5 I17 sing 159 n y N3 C2 I17 sing 160 n y C2 N1 I17 doub 161 n y C2 N10 I17 sing 162 n n C6 N1 I17 sing 163 n y C6 C5 I17 doub 164 n y C6 N18 I17 sing 165 n n C5 N7 I17 sing 166 n y N7 C8 I17 doub 167 n y C8 H81 I17 sing 168 n n N18 C19 I17 sing 169 n n N18 H181 I17 sing 170 n n C19 C20 I17 sing 171 n n C19 H191 I17 sing 172 n n C19 H192 I17 sing 173 n n C25 C24 I17 doub 174 n y C25 C20 I17 sing 175 n y C25 H251 I17 sing 176 n n C24 C23 I17 sing 177 n y C24 H241 I17 sing 178 n n C23 C22 I17 doub 179 n y C23 H231 I17 sing 180 n n C22 C21 I17 sing 181 n y C22 H221 I17 sing 182 n n C21 C20 I17 doub 183 n y C21 H211 I17 sing 184 n n N10 C11 I17 sing 185 n n N10 H101 I17 sing 186 n n C11 C16 I17 sing 187 n n C11 C12 I17 sing 188 n n C11 H111 I17 sing 189 n n C14 C15 I17 sing 190 n n C14 C13 I17 sing 191 n n C14 N17 I17 sing 192 n n C14 H141 I17 sing 193 n n C15 C16 I17 sing 194 n n C15 H151 I17 sing 195 n n C15 H152 I17 sing 196 n n C16 H161 I17 sing 197 n n C16 H162 I17 sing 198 n n C12 C13 I17 sing 199 n n C12 H121 I17 sing 200 n n C12 H122 I17 sing 201 n n C13 H131 I17 sing 202 n n C13 H132 I17 sing 203 n n N17 H171 I17 sing 204 n n N17 H172 I17 sing 205 n n C30 C29 I17 sing 206 n n C30 H301 I17 sing 207 n n C30 H302 I17 sing 208 n n C29 C28 I17 sing 209 n n C29 H291 I17 sing 210 n n C29 H292 I17 sing 211 n n C27 C28 I17 sing 212 n n C27 H271 I17 sing 213 n n C27 H272 I17 sing 214 n n C28 H281 I17 sing 215 n n C28 H282 I17 sing 216 n n # _atom_sites.entry_id 1G5S _atom_sites.fract_transf_matrix[1][1] 0.018457 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013729 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013611 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 I17 A 1 400 400 I17 I17 . C 3 HOH A 1 500 500 HOH HOH . C 3 HOH A 2 501 501 HOH HOH . C 3 HOH A 3 502 502 HOH HOH . C 3 HOH A 4 503 503 HOH HOH . C 3 HOH A 5 504 504 HOH HOH . C 3 HOH A 6 505 505 HOH HOH . C 3 HOH A 7 506 506 HOH HOH . C 3 HOH A 8 507 507 HOH HOH . C 3 HOH A 9 509 509 HOH HOH . C 3 HOH A 10 513 513 HOH HOH . C 3 HOH A 11 514 514 HOH HOH . C 3 HOH A 12 515 515 HOH HOH . C 3 HOH A 13 517 517 HOH HOH . C 3 HOH A 14 518 518 HOH HOH . C 3 HOH A 15 519 519 HOH HOH . C 3 HOH A 16 520 520 HOH HOH . C 3 HOH A 17 522 522 HOH HOH . C 3 HOH A 18 524 524 HOH HOH . C 3 HOH A 19 525 525 HOH HOH . C 3 HOH A 20 527 527 HOH HOH . C 3 HOH A 21 531 531 HOH HOH . C 3 HOH A 22 536 536 HOH HOH . C 3 HOH A 23 537 537 HOH HOH . C 3 HOH A 24 540 540 HOH HOH . C 3 HOH A 25 542 542 HOH HOH . C 3 HOH A 26 543 543 HOH HOH . C 3 HOH A 27 544 544 HOH HOH . C 3 HOH A 28 545 545 HOH HOH . C 3 HOH A 29 547 547 HOH HOH . C 3 HOH A 30 548 548 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C26 I17 . . . B 2 15.292 -8.972 14.573 1 30.28 ? C26 I17 400 A 1 HETATM 2 N N9 I17 . . . B 2 13.986 -9.646 14.344 1 28.71 ? N9 I17 400 A 1 HETATM 3 C C4 I17 . . . B 2 13.29 -9.629 13.158 1 30.03 ? C4 I17 400 A 1 HETATM 4 N N3 I17 . . . B 2 13.695 -8.999 12.031 1 30.63 ? N3 I17 400 A 1 HETATM 5 C C2 I17 . . . B 2 12.88 -9.121 11.026 1 29.38 ? C2 I17 400 A 1 HETATM 6 C C6 I17 . . . B 2 11.242 -10.487 12.237 1 31.13 ? C6 I17 400 A 1 HETATM 7 N N1 I17 . . . B 2 11.676 -9.834 11.071 1 28.8 ? N1 I17 400 A 1 HETATM 8 C C5 I17 . . . B 2 12.136 -10.378 13.388 1 29.5 ? C5 I17 400 A 1 HETATM 9 N N7 I17 . . . B 2 12.086 -10.85 14.669 1 26.6 ? N7 I17 400 A 1 HETATM 10 C C8 I17 . . . B 2 13.21 -10.404 15.243 1 26.48 ? C8 I17 400 A 1 HETATM 11 N N18 I17 . . . B 2 10.001 -11.198 12.26 1 35.9 ? N18 I17 400 A 1 HETATM 12 C C19 I17 . . . B 2 9.199 -11.203 11.04 1 40.95 ? C19 I17 400 A 1 HETATM 13 C C25 I17 . . . B 2 7.877 -13.141 10.973 1 45.01 ? C25 I17 400 A 1 HETATM 14 C C24 I17 . . . B 2 7.46 -14.322 10.333 1 46.91 ? C24 I17 400 A 1 HETATM 15 C C23 I17 . . . B 2 7.994 -14.688 9.109 1 49.46 ? C23 I17 400 A 1 HETATM 16 C C22 I17 . . . B 2 8.961 -13.868 8.503 1 49.28 ? C22 I17 400 A 1 HETATM 17 C C21 I17 . . . B 2 9.379 -12.673 9.151 1 46.65 ? C21 I17 400 A 1 HETATM 18 C C20 I17 . . . B 2 8.833 -12.33 10.374 1 44.2 ? C20 I17 400 A 1 HETATM 19 N N10 I17 . . . B 2 13.226 -8.396 9.754 1 31.83 ? N10 I17 400 A 1 HETATM 20 C C11 I17 . . . B 2 14.479 -7.45 9.659 1 35.52 ? C11 I17 400 A 1 HETATM 21 C C14 I17 . . . B 2 14.943 -4.626 8.849 1 38.58 ? C14 I17 400 A 1 HETATM 22 C C15 I17 . . . B 2 15.124 -5.089 10.275 1 38.33 ? C15 I17 400 A 1 HETATM 23 C C16 I17 . . . B 2 14.246 -6.301 10.588 1 34.97 ? C16 I17 400 A 1 HETATM 24 C C12 I17 . . . B 2 14.538 -7.042 8.096 1 34.27 ? C12 I17 400 A 1 HETATM 25 C C13 I17 . . . B 2 15.353 -5.749 7.938 1 37.67 ? C13 I17 400 A 1 HETATM 26 N N17 I17 . . . B 2 15.821 -3.418 8.584 1 41.03 ? N17 I17 400 A 1 HETATM 27 C C30 I17 . . . B 2 16.592 -8.984 13.829 1 32.41 ? C30 I17 400 A 1 HETATM 28 C C29 I17 . . . B 2 17.064 -7.607 13.78 1 32.7 ? C29 I17 400 A 1 HETATM 29 C C27 I17 . . . B 2 15.1 -7.471 14.851 1 34.27 ? C27 I17 400 A 1 HETATM 30 C C28 I17 . . . B 2 16.504 -6.993 14.945 1 34.19 ? C28 I17 400 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 30 #