data_1G5T # _model_server_result.job_id Vfdm1XhSb12MkeXoK8LpQA _model_server_result.datetime_utc '2025-02-05 11:54:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1g5t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":998}' # _entry.id 1G5T # _exptl.entry_id 1G5T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1G5T _cell.length_a 49.5 _cell.length_b 49.5 _cell.length_c 249.7 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1G5T _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA,PQS dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1,2 A,B,C,D 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 24.75 42.868257 41.616667 3 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 42 A THR 42 1_555 B MG MG . A MG 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc2 A OE2 GLU 128 A GLU 128 1_555 B MG MG . A MG 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc3 B MG MG . A MG 998 1_555 C O2B ATP . A ATP 999 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.144 ? metalc ? metalc4 B MG MG . A MG 998 1_555 C O2B ATP . A ATP 999 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.144 ? metalc ? metalc5 B MG MG . A MG 998 1_555 C O2A ATP . A ATP 999 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.091 ? metalc ? metalc6 B MG MG . A MG 998 1_555 C O2A ATP . A ATP 999 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.074 ? metalc ? metalc7 B MG MG . A MG 998 1_555 D O HOH . A HOH 1589 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc8 B MG MG . A MG 998 1_555 D O HOH . A HOH 1590 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.727 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1G5T _atom_sites.fract_transf_matrix[1][1] 0.020202 _atom_sites.fract_transf_matrix[1][2] 0.011664 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023327 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004005 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 998 998 MG MG+ . C 3 ATP A 1 999 999 ATP ATP . D 4 HOH A 1 1500 1500 HOH HOH . D 4 HOH A 2 1501 1501 HOH HOH . D 4 HOH A 3 1502 1502 HOH HOH . D 4 HOH A 4 1503 1503 HOH HOH . D 4 HOH A 5 1504 1504 HOH HOH . D 4 HOH A 6 1505 1505 HOH HOH . D 4 HOH A 7 1506 1506 HOH HOH . D 4 HOH A 8 1507 1507 HOH HOH . D 4 HOH A 9 1508 1508 HOH HOH . D 4 HOH A 10 1511 1511 HOH HOH . D 4 HOH A 11 1512 1512 HOH HOH . D 4 HOH A 12 1513 1513 HOH HOH . D 4 HOH A 13 1514 1514 HOH HOH . D 4 HOH A 14 1515 1515 HOH HOH . D 4 HOH A 15 1516 1516 HOH HOH . D 4 HOH A 16 1517 1517 HOH HOH . D 4 HOH A 17 1518 1518 HOH HOH . D 4 HOH A 18 1520 1520 HOH HOH . D 4 HOH A 19 1521 1521 HOH HOH . D 4 HOH A 20 1523 1523 HOH HOH . D 4 HOH A 21 1524 1524 HOH HOH . D 4 HOH A 22 1525 1525 HOH HOH . D 4 HOH A 23 1527 1527 HOH HOH . D 4 HOH A 24 1528 1528 HOH HOH . D 4 HOH A 25 1529 1529 HOH HOH . D 4 HOH A 26 1530 1530 HOH HOH . D 4 HOH A 27 1531 1531 HOH HOH . D 4 HOH A 28 1532 1532 HOH HOH . D 4 HOH A 29 1533 1533 HOH HOH . D 4 HOH A 30 1534 1534 HOH HOH . D 4 HOH A 31 1535 1535 HOH HOH . D 4 HOH A 32 1537 1537 HOH HOH . D 4 HOH A 33 1541 1541 HOH HOH . D 4 HOH A 34 1542 1542 HOH HOH . D 4 HOH A 35 1544 1544 HOH HOH . D 4 HOH A 36 1545 1545 HOH HOH . D 4 HOH A 37 1546 1546 HOH HOH . D 4 HOH A 38 1547 1547 HOH HOH . D 4 HOH A 39 1548 1548 HOH HOH . D 4 HOH A 40 1553 1553 HOH HOH . D 4 HOH A 41 1554 1554 HOH HOH . D 4 HOH A 42 1555 1555 HOH HOH . D 4 HOH A 43 1564 1564 HOH HOH . D 4 HOH A 44 1565 1565 HOH HOH . D 4 HOH A 45 1566 1566 HOH HOH . D 4 HOH A 46 1568 1568 HOH HOH . D 4 HOH A 47 1569 1569 HOH HOH . D 4 HOH A 48 1570 1570 HOH HOH . D 4 HOH A 49 1571 1571 HOH HOH . D 4 HOH A 50 1572 1572 HOH HOH . D 4 HOH A 51 1573 1573 HOH HOH . D 4 HOH A 52 1574 1574 HOH HOH . D 4 HOH A 53 1579 1579 HOH HOH . D 4 HOH A 54 1584 1584 HOH HOH . D 4 HOH A 55 1585 1585 HOH HOH . D 4 HOH A 56 1589 1589 HOH HOH . D 4 HOH A 57 1590 1590 HOH HOH . D 4 HOH A 58 1591 1591 HOH HOH . D 4 HOH A 59 1592 1592 HOH HOH . D 4 HOH A 60 1593 1593 HOH HOH . D 4 HOH A 61 1594 1594 HOH HOH . D 4 HOH A 62 1595 1595 HOH HOH . D 4 HOH A 63 1596 1596 HOH HOH . D 4 HOH A 64 1597 1597 HOH HOH . D 4 HOH A 65 1598 1598 HOH HOH . D 4 HOH A 66 1599 1599 HOH HOH . D 4 HOH A 67 1600 1600 HOH HOH . D 4 HOH A 68 1601 1601 HOH HOH . D 4 HOH A 69 1602 1602 HOH HOH . D 4 HOH A 70 1603 1603 HOH HOH . D 4 HOH A 71 1608 1608 HOH HOH . D 4 HOH A 72 1609 1609 HOH HOH . D 4 HOH A 73 1610 1610 HOH HOH . D 4 HOH A 74 1611 1611 HOH HOH . D 4 HOH A 75 1612 1612 HOH HOH . D 4 HOH A 76 1614 1614 HOH HOH . D 4 HOH A 77 1615 1615 HOH HOH . D 4 HOH A 78 1617 1617 HOH HOH . D 4 HOH A 79 1619 1619 HOH HOH . D 4 HOH A 80 1620 1620 HOH HOH . D 4 HOH A 81 1621 1621 HOH HOH . D 4 HOH A 82 1622 1622 HOH HOH . D 4 HOH A 83 1623 1623 HOH HOH . D 4 HOH A 84 1624 1624 HOH HOH . D 4 HOH A 85 1625 1625 HOH HOH . D 4 HOH A 86 1626 1626 HOH HOH . D 4 HOH A 87 1627 1627 HOH HOH . D 4 HOH A 88 1628 1628 HOH HOH . D 4 HOH A 89 1629 1629 HOH HOH . D 4 HOH A 90 1630 1630 HOH HOH . D 4 HOH A 91 1631 1631 HOH HOH . D 4 HOH A 92 1632 1632 HOH HOH . D 4 HOH A 93 1633 1633 HOH HOH . D 4 HOH A 94 1634 1634 HOH HOH . D 4 HOH A 95 1635 1635 HOH HOH . D 4 HOH A 96 1637 1637 HOH HOH . D 4 HOH A 97 1638 1638 HOH HOH . D 4 HOH A 98 1639 1639 HOH HOH . D 4 HOH A 99 1643 1643 HOH HOH . D 4 HOH A 100 1645 1645 HOH HOH . D 4 HOH A 101 1646 1646 HOH HOH . D 4 HOH A 102 1648 1648 HOH HOH . D 4 HOH A 103 1653 1653 HOH HOH . D 4 HOH A 104 1661 1661 HOH HOH . D 4 HOH A 105 1662 1662 HOH HOH . D 4 HOH A 106 1664 1664 HOH HOH . D 4 HOH A 107 1665 1665 HOH HOH . D 4 HOH A 108 1666 1666 HOH HOH . D 4 HOH A 109 1669 1669 HOH HOH . D 4 HOH A 110 1710 1710 HOH HOH . D 4 HOH A 111 1711 1711 HOH HOH . D 4 HOH A 112 1712 1712 HOH HOH . D 4 HOH A 113 1713 1713 HOH HOH . D 4 HOH A 114 1714 1714 HOH HOH . D 4 HOH A 115 1716 1716 HOH HOH . D 4 HOH A 116 1719 1719 HOH HOH . D 4 HOH A 117 1720 1720 HOH HOH . D 4 HOH A 118 1721 1721 HOH HOH . D 4 HOH A 119 1722 1722 HOH HOH . D 4 HOH A 120 1724 1724 HOH HOH . D 4 HOH A 121 1725 1725 HOH HOH . D 4 HOH A 122 1731 1731 HOH HOH . D 4 HOH A 123 1734 1734 HOH HOH . D 4 HOH A 124 1735 1735 HOH HOH . D 4 HOH A 125 1736 1736 HOH HOH . D 4 HOH A 126 1737 1737 HOH HOH . D 4 HOH A 127 1738 1738 HOH HOH . D 4 HOH A 128 1739 1739 HOH HOH . D 4 HOH A 129 1741 1741 HOH HOH . D 4 HOH A 130 1746 1746 HOH HOH . D 4 HOH A 131 1747 1747 HOH HOH . D 4 HOH A 132 1748 1748 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 28.961 _atom_site.Cartn_y 8.597 _atom_site.Cartn_z -5.042 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 6.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 998 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #