data_1G6N # _model_server_result.job_id qyfyaTmiFl-p0kaQQpgFEA _model_server_result.datetime_utc '2025-06-20 12:33:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1g6n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":621}' # _entry.id 1G6N # _exptl.entry_id 1G6N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 329.206 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1G6N _cell.length_a 46.8 _cell.length_b 95.6 _cell.length_c 105.5 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1G6N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C10 H12 N5 O6 P' _chem_comp.formula_weight 329.206 _chem_comp.id CMP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'CYCLIC AMP;CAMP' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P CMP doub 70 n n P O2P CMP sing 71 n n P O5' CMP sing 72 n n P O3' CMP sing 73 n n O2P HOP2 CMP sing 74 n n O5' C5' CMP sing 75 n n C5' C4' CMP sing 76 n n C5' "H5'1" CMP sing 77 n n C5' "H5'2" CMP sing 78 n n C4' O4' CMP sing 79 n n C4' C3' CMP sing 80 n n C4' H4' CMP sing 81 n n O4' C1' CMP sing 82 n n C3' O3' CMP sing 83 n n C3' C2' CMP sing 84 n n C3' H3' CMP sing 85 n n C2' O2' CMP sing 86 n n C2' C1' CMP sing 87 n n C2' H2' CMP sing 88 n n O2' HO2' CMP sing 89 n n C1' N9 CMP sing 90 n n C1' H1' CMP sing 91 n n N9 C8 CMP sing 92 n y N9 C4 CMP sing 93 n y C8 N7 CMP doub 94 n y C8 H8 CMP sing 95 n n N7 C5 CMP sing 96 n y C5 C6 CMP sing 97 n y C5 C4 CMP doub 98 n y C6 N6 CMP sing 99 n n C6 N1 CMP doub 100 n y N6 HN61 CMP sing 101 n n N6 HN62 CMP sing 102 n n N1 C2 CMP sing 103 n y C2 N3 CMP doub 104 n y C2 H2 CMP sing 105 n n N3 C4 CMP sing 106 n y # _atom_sites.entry_id 1G6N _atom_sites.fract_transf_matrix[1][1] 0.021368 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01046 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009479 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CMP A 1 621 621 CMP CMP . D 2 CMP B 1 622 622 CMP CMP . E 3 HOH A 1 701 701 HOH H2O . E 3 HOH A 2 702 702 HOH H2O . E 3 HOH A 3 703 703 HOH H2O . E 3 HOH A 4 704 704 HOH H2O . E 3 HOH A 5 705 705 HOH H2O . E 3 HOH A 6 710 710 HOH H2O . E 3 HOH A 7 711 711 HOH H2O . E 3 HOH A 8 712 712 HOH H2O . E 3 HOH A 9 713 713 HOH H2O . E 3 HOH A 10 714 714 HOH H2O . E 3 HOH A 11 715 715 HOH H2O . E 3 HOH A 12 716 716 HOH H2O . E 3 HOH A 13 717 717 HOH H2O . E 3 HOH A 14 718 718 HOH H2O . E 3 HOH A 15 719 719 HOH H2O . E 3 HOH A 16 720 720 HOH H2O . E 3 HOH A 17 721 721 HOH H2O . E 3 HOH A 18 723 723 HOH H2O . E 3 HOH A 19 724 724 HOH H2O . E 3 HOH A 20 725 725 HOH H2O . E 3 HOH A 21 726 726 HOH H2O . E 3 HOH A 22 727 727 HOH H2O . E 3 HOH A 23 731 731 HOH H2O . E 3 HOH A 24 748 748 HOH H2O . E 3 HOH A 25 766 766 HOH H2O . E 3 HOH A 26 770 770 HOH H2O . E 3 HOH A 27 772 772 HOH H2O . E 3 HOH A 28 773 773 HOH H2O . E 3 HOH A 29 777 777 HOH H2O . E 3 HOH A 30 779 779 HOH H2O . E 3 HOH A 31 780 780 HOH H2O . E 3 HOH A 32 784 784 HOH H2O . E 3 HOH A 33 786 786 HOH H2O . E 3 HOH A 34 787 787 HOH H2O . E 3 HOH A 35 789 789 HOH H2O . E 3 HOH A 36 791 791 HOH H2O . E 3 HOH A 37 793 793 HOH H2O . E 3 HOH A 38 794 794 HOH H2O . E 3 HOH A 39 800 800 HOH H2O . E 3 HOH A 40 803 803 HOH H2O . E 3 HOH A 41 804 804 HOH H2O . E 3 HOH A 42 805 805 HOH H2O . E 3 HOH A 43 808 808 HOH H2O . E 3 HOH A 44 811 811 HOH H2O . E 3 HOH A 45 812 812 HOH H2O . E 3 HOH A 46 813 813 HOH H2O . F 3 HOH B 1 700 700 HOH H2O . F 3 HOH B 2 706 706 HOH H2O . F 3 HOH B 3 707 707 HOH H2O . F 3 HOH B 4 708 708 HOH H2O . F 3 HOH B 5 709 709 HOH H2O . F 3 HOH B 6 722 722 HOH H2O . F 3 HOH B 7 728 728 HOH H2O . F 3 HOH B 8 729 729 HOH H2O . F 3 HOH B 9 730 730 HOH H2O . F 3 HOH B 10 732 732 HOH H2O . F 3 HOH B 11 733 733 HOH H2O . F 3 HOH B 12 734 734 HOH H2O . F 3 HOH B 13 735 735 HOH H2O . F 3 HOH B 14 736 736 HOH H2O . F 3 HOH B 15 737 737 HOH H2O . F 3 HOH B 16 738 738 HOH H2O . F 3 HOH B 17 739 739 HOH H2O . F 3 HOH B 18 740 740 HOH H2O . F 3 HOH B 19 741 741 HOH H2O . F 3 HOH B 20 742 742 HOH H2O . F 3 HOH B 21 743 743 HOH H2O . F 3 HOH B 22 744 744 HOH H2O . F 3 HOH B 23 745 745 HOH H2O . F 3 HOH B 24 746 746 HOH H2O . F 3 HOH B 25 747 747 HOH H2O . F 3 HOH B 26 749 749 HOH H2O . F 3 HOH B 27 750 750 HOH H2O . F 3 HOH B 28 751 751 HOH H2O . F 3 HOH B 29 752 752 HOH H2O . F 3 HOH B 30 753 753 HOH H2O . F 3 HOH B 31 754 754 HOH H2O . F 3 HOH B 32 755 755 HOH H2O . F 3 HOH B 33 756 756 HOH H2O . F 3 HOH B 34 757 757 HOH H2O . F 3 HOH B 35 758 758 HOH H2O . F 3 HOH B 36 759 759 HOH H2O . F 3 HOH B 37 760 760 HOH H2O . F 3 HOH B 38 761 761 HOH H2O . F 3 HOH B 39 762 762 HOH H2O . F 3 HOH B 40 763 763 HOH H2O . F 3 HOH B 41 764 764 HOH H2O . F 3 HOH B 42 765 765 HOH H2O . F 3 HOH B 43 767 767 HOH H2O . F 3 HOH B 44 768 768 HOH H2O . F 3 HOH B 45 769 769 HOH H2O . F 3 HOH B 46 771 771 HOH H2O . F 3 HOH B 47 774 774 HOH H2O . F 3 HOH B 48 775 775 HOH H2O . F 3 HOH B 49 776 776 HOH H2O . F 3 HOH B 50 778 778 HOH H2O . F 3 HOH B 51 781 781 HOH H2O . F 3 HOH B 52 782 782 HOH H2O . F 3 HOH B 53 783 783 HOH H2O . F 3 HOH B 54 785 785 HOH H2O . F 3 HOH B 55 788 788 HOH H2O . F 3 HOH B 56 790 790 HOH H2O . F 3 HOH B 57 792 792 HOH H2O . F 3 HOH B 58 795 795 HOH H2O . F 3 HOH B 59 796 796 HOH H2O . F 3 HOH B 60 797 797 HOH H2O . F 3 HOH B 61 798 798 HOH H2O . F 3 HOH B 62 799 799 HOH H2O . F 3 HOH B 63 801 801 HOH H2O . F 3 HOH B 64 802 802 HOH H2O . F 3 HOH B 65 806 806 HOH H2O . F 3 HOH B 66 807 807 HOH H2O . F 3 HOH B 67 809 809 HOH H2O . F 3 HOH B 68 810 810 HOH H2O . F 3 HOH B 69 814 814 HOH H2O . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P CMP . . . C 2 40.558 42.062 52.021 1 16.49 ? P CMP 621 A 1 HETATM 2 O O1P CMP . . . C 2 40.284 41.032 50.963 1 13.87 ? O1P CMP 621 A 1 HETATM 3 O O2P CMP . . . C 2 40.66 41.69 53.413 1 16.14 ? O2P CMP 621 A 1 HETATM 4 O O5' CMP . . . C 2 41.852 42.872 51.531 1 15.03 ? O5' CMP 621 A 1 HETATM 5 C C5' CMP . . . C 2 41.764 43.6 50.298 1 13.39 ? C5' CMP 621 A 1 HETATM 6 C C4' CMP . . . C 2 40.695 44.641 50.513 1 14.05 ? C4' CMP 621 A 1 HETATM 7 O O4' CMP . . . C 2 40.334 45.393 49.361 1 13.84 ? O4' CMP 621 A 1 HETATM 8 C C3' CMP . . . C 2 39.4 43.962 50.721 1 13.89 ? C3' CMP 621 A 1 HETATM 9 O O3' CMP . . . C 2 39.511 43.314 52.032 1 14.8 ? O3' CMP 621 A 1 HETATM 10 C C2' CMP . . . C 2 38.31 45.089 50.723 1 13.9 ? C2' CMP 621 A 1 HETATM 11 O O2' CMP . . . C 2 38.656 45.873 51.852 1 13.08 ? O2' CMP 621 A 1 HETATM 12 C C1' CMP . . . C 2 38.942 45.85 49.462 1 13.7 ? C1' CMP 621 A 1 HETATM 13 N N9 CMP . . . C 2 38.342 45.44 48.176 1 12.36 ? N9 CMP 621 A 1 HETATM 14 C C8 CMP . . . C 2 38.449 44.244 47.461 1 11.75 ? C8 CMP 621 A 1 HETATM 15 N N7 CMP . . . C 2 37.676 44.195 46.409 1 11.87 ? N7 CMP 621 A 1 HETATM 16 C C5 CMP . . . C 2 37.01 45.389 46.411 1 11.28 ? C5 CMP 621 A 1 HETATM 17 C C6 CMP . . . C 2 36.103 45.935 45.495 1 12.41 ? C6 CMP 621 A 1 HETATM 18 N N6 CMP . . . C 2 35.55 45.319 44.445 1 10.72 ? N6 CMP 621 A 1 HETATM 19 N N1 CMP . . . C 2 35.708 47.194 45.819 1 11.55 ? N1 CMP 621 A 1 HETATM 20 C C2 CMP . . . C 2 36.173 47.844 46.863 1 11.15 ? C2 CMP 621 A 1 HETATM 21 N N3 CMP . . . C 2 37.039 47.441 47.761 1 11.9 ? N3 CMP 621 A 1 HETATM 22 C C4 CMP . . . C 2 37.403 46.175 47.466 1 12.31 ? C4 CMP 621 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 779 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 22 #