data_1GC6 # _model_server_result.job_id lNqlQ6ntcgiW-55t66lI1g _model_server_result.datetime_utc '2024-12-01 04:50:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gc6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1229}' # _entry.id 1GC6 # _exptl.entry_id 1GC6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 420.096 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GC6 _cell.length_a 96.8 _cell.length_b 96.8 _cell.length_c 132.75 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GC6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H15 O15 P3' _chem_comp.formula_weight 420.096 _chem_comp.id I3P _chem_comp.mon_nstd_flag . _chem_comp.name D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 I3P sing 150 n n C1 C6 I3P sing 151 n n C1 O1 I3P sing 152 n n C1 H1 I3P sing 153 n n C2 C3 I3P sing 154 n n C2 O2 I3P sing 155 n n C2 H2 I3P sing 156 n n C3 C4 I3P sing 157 n n C3 O3 I3P sing 158 n n C3 H3 I3P sing 159 n n C4 C5 I3P sing 160 n n C4 O4 I3P sing 161 n n C4 H4 I3P sing 162 n n C5 C6 I3P sing 163 n n C5 O5 I3P sing 164 n n C5 H5 I3P sing 165 n n C6 O6 I3P sing 166 n n C6 H6 I3P sing 167 n n O1 P1 I3P sing 168 n n O2 HO2 I3P sing 169 n n O3 HO3 I3P sing 170 n n O4 P4 I3P sing 171 n n O5 P5 I3P sing 172 n n O6 HO6 I3P sing 173 n n P1 O11 I3P doub 174 n n P1 O12 I3P sing 175 n n P1 O13 I3P sing 176 n n O12 HO12 I3P sing 177 n n O13 HO13 I3P sing 178 n n P4 O41 I3P doub 179 n n P4 O42 I3P sing 180 n n P4 O43 I3P sing 181 n n O42 HO42 I3P sing 182 n n O43 HO43 I3P sing 183 n n P5 O51 I3P doub 184 n n P5 O52 I3P sing 185 n n P5 O53 I3P sing 186 n n O52 HO52 I3P sing 187 n n O53 HO53 I3P sing 188 n n # _atom_sites.entry_id 1GC6 _atom_sites.fract_transf_matrix[1][1] 0.010331 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010331 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007533 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id I3P _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1229 _pdbx_nonpoly_scheme.auth_seq_num 1229 _pdbx_nonpoly_scheme.pdb_mon_id I3P _pdbx_nonpoly_scheme.auth_mon_id I3P _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 I3P . . . B 2 81.392 75.189 93.5 1 100 ? C1 I3P 1229 A 1 HETATM 2 C C2 I3P . . . B 2 80.89 74.867 92.057 1 100 ? C2 I3P 1229 A 1 HETATM 3 C C3 I3P . . . B 2 81.956 74.108 91.254 1 100 ? C3 I3P 1229 A 1 HETATM 4 C C4 I3P . . . B 2 82.329 72.782 92.011 1 100 ? C4 I3P 1229 A 1 HETATM 5 C C5 I3P . . . B 2 82.873 73.162 93.427 1 100 ? C5 I3P 1229 A 1 HETATM 6 C C6 I3P . . . B 2 81.807 73.919 94.246 1 100 ? C6 I3P 1229 A 1 HETATM 7 O O1 I3P . . . B 2 80.365 75.907 94.396 1 100 ? O1 I3P 1229 A 1 HETATM 8 O O2 I3P . . . B 2 79.691 74.083 92.092 1 100 ? O2 I3P 1229 A 1 HETATM 9 O O3 I3P . . . B 2 81.435 73.835 89.94 1 100 ? O3 I3P 1229 A 1 HETATM 10 O O4 I3P . . . B 2 83.358 72.009 91.19 1 100 ? O4 I3P 1229 A 1 HETATM 11 O O5 I3P . . . B 2 83.243 71.947 94.18 1 100 ? O5 I3P 1229 A 1 HETATM 12 O O6 I3P . . . B 2 82.282 74.287 95.549 1 100 ? O6 I3P 1229 A 1 HETATM 13 P P1 I3P . . . B 2 79.016 75.262 95.152 1 100 ? P1 I3P 1229 A 1 HETATM 14 O O11 I3P . . . B 2 77.892 76.247 94.857 1 100 ? O11 I3P 1229 A 1 HETATM 15 O O12 I3P . . . B 2 79.413 75.191 96.621 1 100 ? O12 I3P 1229 A 1 HETATM 16 O O13 I3P . . . B 2 78.893 73.89 94.551 1 100 ? O13 I3P 1229 A 1 HETATM 17 P P4 I3P . . . B 2 83.167 70.461 90.575 1 100 ? P4 I3P 1229 A 1 HETATM 18 O O41 I3P . . . B 2 82.023 69.995 91.468 1 100 ? O41 I3P 1229 A 1 HETATM 19 O O42 I3P . . . B 2 82.779 70.678 89.133 1 100 ? O42 I3P 1229 A 1 HETATM 20 O O43 I3P . . . B 2 84.464 69.687 90.701 1 100 ? O43 I3P 1229 A 1 HETATM 21 P P5 I3P . . . B 2 84.436 71.824 95.326 1 100 ? P5 I3P 1229 A 1 HETATM 22 O O51 I3P . . . B 2 84.314 70.353 95.683 1 100 ? O51 I3P 1229 A 1 HETATM 23 O O52 I3P . . . B 2 85.687 72.256 94.574 1 100 ? O52 I3P 1229 A 1 HETATM 24 O O53 I3P . . . B 2 83.979 72.77 96.402 1 100 ? O53 I3P 1229 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #