data_1GCD # _model_server_result.job_id 2XR-rYRDuVVWvSbtGvPonA _model_server_result.datetime_utc '2024-11-15 00:49:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gcd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":296}' # _entry.id 1GCD # _exptl.entry_id 1GCD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GCD _cell.length_a 69 _cell.length_b 69 _cell.length_c 95.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GCD _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 69 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 1 A CYS 1 1_555 A SG CYS 122 A CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? disulf ? disulf2 A SG CYS 42 A CYS 42 1_555 A SG CYS 58 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf3 A SG CYS 136 A CYS 136 1_555 A SG CYS 201 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? disulf ? disulf4 A SG CYS 168 A CYS 168 1_555 A SG CYS 182 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf5 A SG CYS 191 A CYS 191 1_555 A SG CYS 220 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? covale ? covale1 A OG SER 195 A SER 195 1_555 E P DEP . A DEP 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.535 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 308 n n S O2 SO4 doub 309 n n S O3 SO4 sing 310 n n S O4 SO4 sing 311 n n # _atom_sites.entry_id 1GCD _atom_sites.fract_transf_matrix[1][1] 0.014493 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014493 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010493 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 296 296 SO4 SO4 . C 2 SO4 A 1 297 297 SO4 SO4 . D 2 SO4 A 1 298 298 SO4 SO4 . E 3 DEP A 1 290 290 DEP DEP . F 4 HOH A 1 300 300 HOH HOH . F 4 HOH A 2 301 301 HOH HOH . F 4 HOH A 3 302 302 HOH HOH . F 4 HOH A 4 303 303 HOH HOH . F 4 HOH A 5 304 304 HOH HOH . F 4 HOH A 6 305 305 HOH HOH . F 4 HOH A 7 306 306 HOH HOH . F 4 HOH A 8 307 307 HOH HOH . F 4 HOH A 9 308 308 HOH HOH . F 4 HOH A 10 309 309 HOH HOH . F 4 HOH A 11 310 310 HOH HOH . F 4 HOH A 12 311 311 HOH HOH . F 4 HOH A 13 312 312 HOH HOH . F 4 HOH A 14 313 313 HOH HOH . F 4 HOH A 15 314 314 HOH HOH . F 4 HOH A 16 315 315 HOH HOH . F 4 HOH A 17 316 316 HOH HOH . F 4 HOH A 18 317 317 HOH HOH . F 4 HOH A 19 318 318 HOH HOH . F 4 HOH A 20 319 319 HOH HOH . F 4 HOH A 21 320 320 HOH HOH . F 4 HOH A 22 321 321 HOH HOH . F 4 HOH A 23 322 322 HOH HOH . F 4 HOH A 24 323 323 HOH HOH . F 4 HOH A 25 324 324 HOH HOH . F 4 HOH A 26 325 325 HOH HOH . F 4 HOH A 27 326 326 HOH HOH . F 4 HOH A 28 327 327 HOH HOH . F 4 HOH A 29 328 328 HOH HOH . F 4 HOH A 30 329 329 HOH HOH . F 4 HOH A 31 330 330 HOH HOH . F 4 HOH A 32 331 331 HOH HOH . F 4 HOH A 33 332 332 HOH HOH . F 4 HOH A 34 333 333 HOH HOH . F 4 HOH A 35 334 334 HOH HOH . F 4 HOH A 36 335 335 HOH HOH . F 4 HOH A 37 336 336 HOH HOH . F 4 HOH A 38 337 337 HOH HOH . F 4 HOH A 39 338 338 HOH HOH . F 4 HOH A 40 339 339 HOH HOH . F 4 HOH A 41 340 340 HOH HOH . F 4 HOH A 42 341 341 HOH HOH . F 4 HOH A 43 342 342 HOH HOH . F 4 HOH A 44 343 343 HOH HOH . F 4 HOH A 45 344 344 HOH HOH . F 4 HOH A 46 345 345 HOH HOH . F 4 HOH A 47 346 346 HOH HOH . F 4 HOH A 48 347 347 HOH HOH . F 4 HOH A 49 348 348 HOH HOH . F 4 HOH A 50 349 349 HOH HOH . F 4 HOH A 51 350 350 HOH HOH . F 4 HOH A 52 351 351 HOH HOH . F 4 HOH A 53 352 352 HOH HOH . F 4 HOH A 54 353 353 HOH HOH . F 4 HOH A 55 354 354 HOH HOH . F 4 HOH A 56 355 355 HOH HOH . F 4 HOH A 57 356 356 HOH HOH . F 4 HOH A 58 357 357 HOH HOH . F 4 HOH A 59 358 358 HOH HOH . F 4 HOH A 60 359 359 HOH HOH . F 4 HOH A 61 360 360 HOH HOH . F 4 HOH A 62 361 361 HOH HOH . F 4 HOH A 63 362 362 HOH HOH . F 4 HOH A 64 363 363 HOH HOH . F 4 HOH A 65 364 364 HOH HOH . F 4 HOH A 66 365 365 HOH HOH . F 4 HOH A 67 366 366 HOH HOH . F 4 HOH A 68 367 367 HOH HOH . F 4 HOH A 69 368 368 HOH HOH . F 4 HOH A 70 369 369 HOH HOH . F 4 HOH A 71 370 370 HOH HOH . F 4 HOH A 72 371 371 HOH HOH . F 4 HOH A 73 372 372 HOH HOH . F 4 HOH A 74 373 373 HOH HOH . F 4 HOH A 75 374 374 HOH HOH . F 4 HOH A 76 375 375 HOH HOH . F 4 HOH A 77 376 376 HOH HOH . F 4 HOH A 78 377 377 HOH HOH . F 4 HOH A 79 378 378 HOH HOH . F 4 HOH A 80 379 379 HOH HOH . F 4 HOH A 81 380 380 HOH HOH . F 4 HOH A 82 381 381 HOH HOH . F 4 HOH A 83 382 382 HOH HOH . F 4 HOH A 84 383 383 HOH HOH . F 4 HOH A 85 384 384 HOH HOH . F 4 HOH A 86 385 385 HOH HOH . F 4 HOH A 87 386 386 HOH HOH . F 4 HOH A 88 387 387 HOH HOH . F 4 HOH A 89 388 388 HOH HOH . F 4 HOH A 90 389 389 HOH HOH . F 4 HOH A 91 390 390 HOH HOH . F 4 HOH A 92 391 391 HOH HOH . F 4 HOH A 93 392 392 HOH HOH . F 4 HOH A 94 393 393 HOH HOH . F 4 HOH A 95 394 394 HOH HOH . F 4 HOH A 96 395 395 HOH HOH . F 4 HOH A 97 396 396 HOH HOH . F 4 HOH A 98 397 397 HOH HOH . F 4 HOH A 99 398 398 HOH HOH . F 4 HOH A 100 399 399 HOH HOH . F 4 HOH A 101 400 400 HOH HOH . F 4 HOH A 102 401 401 HOH HOH . F 4 HOH A 103 402 402 HOH HOH . F 4 HOH A 104 403 403 HOH HOH . F 4 HOH A 105 404 404 HOH HOH . F 4 HOH A 106 405 405 HOH HOH . F 4 HOH A 107 406 406 HOH HOH . F 4 HOH A 108 407 407 HOH HOH . F 4 HOH A 109 408 408 HOH HOH . F 4 HOH A 110 409 409 HOH HOH . F 4 HOH A 111 410 410 HOH HOH . F 4 HOH A 112 411 411 HOH HOH . F 4 HOH A 113 412 412 HOH HOH . F 4 HOH A 114 413 413 HOH HOH . F 4 HOH A 115 414 414 HOH HOH . F 4 HOH A 116 415 415 HOH HOH . F 4 HOH A 117 416 416 HOH HOH . F 4 HOH A 118 417 417 HOH HOH . F 4 HOH A 119 418 418 HOH HOH . F 4 HOH A 120 419 419 HOH HOH . F 4 HOH A 121 420 420 HOH HOH . F 4 HOH A 122 421 421 HOH HOH . F 4 HOH A 123 422 422 HOH HOH . F 4 HOH A 124 423 423 HOH HOH . F 4 HOH A 125 424 424 HOH HOH . F 4 HOH A 126 425 425 HOH HOH . F 4 HOH A 127 426 426 HOH HOH . F 4 HOH A 128 427 427 HOH HOH . F 4 HOH A 129 428 428 HOH HOH . F 4 HOH A 130 429 429 HOH HOH . F 4 HOH A 131 430 430 HOH HOH . F 4 HOH A 132 431 431 HOH HOH . F 4 HOH A 133 432 432 HOH HOH . F 4 HOH A 134 433 433 HOH HOH . F 4 HOH A 135 434 434 HOH HOH . F 4 HOH A 136 435 435 HOH HOH . F 4 HOH A 137 436 436 HOH HOH . F 4 HOH A 138 437 437 HOH HOH . F 4 HOH A 139 438 438 HOH HOH . F 4 HOH A 140 439 439 HOH HOH . F 4 HOH A 141 440 440 HOH HOH . F 4 HOH A 142 441 441 HOH HOH . F 4 HOH A 143 442 442 HOH HOH . F 4 HOH A 144 443 443 HOH HOH . F 4 HOH A 145 444 444 HOH HOH . F 4 HOH A 146 445 445 HOH HOH . F 4 HOH A 147 446 446 HOH HOH . F 4 HOH A 148 447 447 HOH HOH . F 4 HOH A 149 448 448 HOH HOH . F 4 HOH A 150 449 449 HOH HOH . F 4 HOH A 151 450 450 HOH HOH . F 4 HOH A 152 451 451 HOH HOH . F 4 HOH A 153 452 452 HOH HOH . F 4 HOH A 154 453 453 HOH HOH . F 4 HOH A 155 454 454 HOH HOH . F 4 HOH A 156 455 455 HOH HOH . F 4 HOH A 157 456 456 HOH HOH . F 4 HOH A 158 457 457 HOH HOH . F 4 HOH A 159 458 458 HOH HOH . F 4 HOH A 160 459 459 HOH HOH . F 4 HOH A 161 460 460 HOH HOH . F 4 HOH A 162 461 461 HOH HOH . F 4 HOH A 163 462 462 HOH HOH . F 4 HOH A 164 463 463 HOH HOH . F 4 HOH A 165 464 464 HOH HOH . F 4 HOH A 166 465 465 HOH HOH . F 4 HOH A 167 466 466 HOH HOH . F 4 HOH A 168 467 467 HOH HOH . F 4 HOH A 169 468 468 HOH HOH . F 4 HOH A 170 469 469 HOH HOH . F 4 HOH A 171 470 470 HOH HOH . F 4 HOH A 172 471 471 HOH HOH . F 4 HOH A 173 472 472 HOH HOH . F 4 HOH A 174 473 473 HOH HOH . F 4 HOH A 175 474 474 HOH HOH . F 4 HOH A 176 475 475 HOH HOH . F 4 HOH A 177 476 476 HOH HOH . F 4 HOH A 178 477 477 HOH HOH . F 4 HOH A 179 478 478 HOH HOH . F 4 HOH A 180 479 479 HOH HOH . F 4 HOH A 181 480 480 HOH HOH . F 4 HOH A 182 481 481 HOH HOH . F 4 HOH A 183 482 482 HOH HOH . F 4 HOH A 184 483 483 HOH HOH . F 4 HOH A 185 484 484 HOH HOH . F 4 HOH A 186 485 485 HOH HOH . F 4 HOH A 187 486 486 HOH HOH . F 4 HOH A 188 487 487 HOH HOH . F 4 HOH A 189 488 488 HOH HOH . F 4 HOH A 190 489 489 HOH HOH . F 4 HOH A 191 490 490 HOH HOH . F 4 HOH A 192 491 491 HOH HOH . F 4 HOH A 193 492 492 HOH HOH . F 4 HOH A 194 493 493 HOH HOH . F 4 HOH A 195 494 494 HOH HOH . F 4 HOH A 196 495 495 HOH HOH . F 4 HOH A 197 496 496 HOH HOH . F 4 HOH A 198 497 497 HOH HOH . F 4 HOH A 199 498 498 HOH HOH . F 4 HOH A 200 499 499 HOH HOH . F 4 HOH A 201 500 500 HOH HOH . F 4 HOH A 202 501 501 HOH HOH . F 4 HOH A 203 502 502 HOH HOH . F 4 HOH A 204 503 503 HOH HOH . F 4 HOH A 205 504 504 HOH HOH . F 4 HOH A 206 505 505 HOH HOH . F 4 HOH A 207 506 506 HOH HOH . F 4 HOH A 208 507 507 HOH HOH . F 4 HOH A 209 508 508 HOH HOH . F 4 HOH A 210 509 509 HOH HOH . F 4 HOH A 211 510 510 HOH HOH . F 4 HOH A 212 511 511 HOH HOH . F 4 HOH A 213 512 512 HOH HOH . F 4 HOH A 214 513 513 HOH HOH . F 4 HOH A 215 514 514 HOH HOH . F 4 HOH A 216 515 515 HOH HOH . F 4 HOH A 217 516 516 HOH HOH . F 4 HOH A 218 517 517 HOH HOH . F 4 HOH A 219 518 518 HOH HOH . F 4 HOH A 220 519 519 HOH HOH . F 4 HOH A 221 520 520 HOH HOH . F 4 HOH A 222 521 521 HOH HOH . F 4 HOH A 223 522 522 HOH HOH . F 4 HOH A 224 523 523 HOH HOH . F 4 HOH A 225 524 524 HOH HOH . F 4 HOH A 226 525 525 HOH HOH . F 4 HOH A 227 526 526 HOH HOH . F 4 HOH A 228 527 527 HOH HOH . F 4 HOH A 229 528 528 HOH HOH . F 4 HOH A 230 529 529 HOH HOH . F 4 HOH A 231 530 530 HOH HOH . F 4 HOH A 232 531 531 HOH HOH . F 4 HOH A 233 532 532 HOH HOH . F 4 HOH A 234 533 533 HOH HOH . F 4 HOH A 235 534 534 HOH HOH . F 4 HOH A 236 535 535 HOH HOH . F 4 HOH A 237 536 536 HOH HOH . F 4 HOH A 238 537 537 HOH HOH . F 4 HOH A 239 538 538 HOH HOH . F 4 HOH A 240 539 539 HOH HOH . F 4 HOH A 241 540 540 HOH HOH . F 4 HOH A 242 541 541 HOH HOH . F 4 HOH A 243 542 542 HOH HOH . F 4 HOH A 244 543 543 HOH HOH . F 4 HOH A 245 544 544 HOH HOH . F 4 HOH A 246 545 545 HOH HOH . F 4 HOH A 247 546 546 HOH HOH . F 4 HOH A 248 547 547 HOH HOH . F 4 HOH A 249 548 548 HOH HOH . F 4 HOH A 250 549 549 HOH HOH . F 4 HOH A 251 550 550 HOH HOH . F 4 HOH A 252 551 551 HOH HOH . F 4 HOH A 253 552 552 HOH HOH . F 4 HOH A 254 553 553 HOH HOH . F 4 HOH A 255 554 554 HOH HOH . F 4 HOH A 256 555 555 HOH HOH . F 4 HOH A 257 556 556 HOH HOH . F 4 HOH A 258 557 557 HOH HOH . F 4 HOH A 259 558 558 HOH HOH . F 4 HOH A 260 559 559 HOH HOH . F 4 HOH A 261 560 560 HOH HOH . F 4 HOH A 262 561 561 HOH HOH . F 4 HOH A 263 562 562 HOH HOH . F 4 HOH A 264 563 563 HOH HOH . F 4 HOH A 265 564 564 HOH HOH . F 4 HOH A 266 565 565 HOH HOH . F 4 HOH A 267 566 566 HOH HOH . F 4 HOH A 268 567 567 HOH HOH . F 4 HOH A 269 568 568 HOH HOH . F 4 HOH A 270 569 569 HOH HOH . F 4 HOH A 271 570 570 HOH HOH . F 4 HOH A 272 571 571 HOH HOH . F 4 HOH A 273 572 572 HOH HOH . F 4 HOH A 274 573 573 HOH HOH . F 4 HOH A 275 574 574 HOH HOH . F 4 HOH A 276 575 575 HOH HOH . F 4 HOH A 277 576 576 HOH HOH . F 4 HOH A 278 577 577 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 3.559 7.651 17.684 1 47.57 ? S SO4 296 A 1 HETATM 2 O O1 SO4 . . . B 2 3.38 8.863 16.812 1 47.64 ? O1 SO4 296 A 1 HETATM 3 O O2 SO4 . . . B 2 4.268 6.598 16.896 1 47.29 ? O2 SO4 296 A 1 HETATM 4 O O3 SO4 . . . B 2 4.333 8.036 18.905 1 47.52 ? O3 SO4 296 A 1 HETATM 5 O O4 SO4 . . . B 2 2.211 7.15 18.142 1 47.42 ? O4 SO4 296 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 469 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #