data_1GCK
#
_model_server_result.job_id            7NFBReEac3AlYnuEc-Kurw 
_model_server_result.datetime_utc      '2024-12-01 05:46:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1gck 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":414}' 
#
_entry.id    1GCK 
#
_exptl.entry_id    1GCK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              133.103 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ASPARTIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1GCK 
_cell.length_a            62.75 
_cell.length_b            74.89 
_cell.length_c            163.9 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1GCK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 D C4A PLP . A PLP 413 1_555 C N ASP . A ASP 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.511 ? 
covale ? covale2 F C4A PLP . B PLP 913 1_555 E N ASP . B ASP 914 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.463 ? 
#
_chem_comp.formula           'C4 H7 N O4' 
_chem_comp.formula_weight    133.103 
_chem_comp.id                ASP 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              'ASPARTIC ACID' 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA ASP sing 55 n n 
N H ASP sing 56 n n 
N H2 ASP sing 57 n n 
CA C ASP sing 58 n n 
CA CB ASP sing 59 n n 
CA HA ASP sing 60 n n 
C O ASP doub 61 n n 
C OXT ASP sing 62 n n 
CB CG ASP sing 63 n n 
CB HB2 ASP sing 64 n n 
CB HB3 ASP sing 65 n n 
CG OD1 ASP doub 66 n n 
CG OD2 ASP sing 67 n n 
OD2 HD2 ASP sing 68 n n 
OXT HXT ASP sing 69 n n 
#
_atom_sites.entry_id                     1GCK 
_atom_sites.fract_transf_matrix[1][1]    0.015936 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013353 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006101 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ASP A 1 414 414 ASP ASP . 
D 3 PLP A 1 413 413 PLP PLP . 
E 2 ASP B 1 914 914 ASP ASP . 
F 3 PLP B 1 913 913 PLP PLP . 
G 4 HOH A 1 1005 1005 HOH WAT . 
G 4 HOH A 2 1007 1007 HOH WAT . 
G 4 HOH A 3 1008 1008 HOH WAT . 
G 4 HOH A 4 1010 1010 HOH WAT . 
G 4 HOH A 5 1012 1012 HOH WAT . 
G 4 HOH A 6 1013 1013 HOH WAT . 
G 4 HOH A 7 1014 1014 HOH WAT . 
G 4 HOH A 8 1019 1019 HOH WAT . 
G 4 HOH A 9 1020 1020 HOH WAT . 
H 4 HOH B 1 1001 1001 HOH WAT . 
H 4 HOH B 2 1002 1002 HOH WAT . 
H 4 HOH B 3 1003 1003 HOH WAT . 
H 4 HOH B 4 1004 1004 HOH WAT . 
H 4 HOH B 5 1006 1006 HOH WAT . 
H 4 HOH B 6 1009 1009 HOH WAT . 
H 4 HOH B 7 1011 1011 HOH WAT . 
H 4 HOH B 8 1015 1015 HOH WAT . 
H 4 HOH B 9 1016 1016 HOH WAT . 
H 4 HOH B 10 1017 1017 HOH WAT . 
H 4 HOH B 11 1018 1018 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N ASP . . . C 2 16.865 5.854 55.519 1 47.73 ? N ASP 414 A 1 
HETATM 2 C CA ASP . . . C 2 18.3 5.789 55.781 1 50.34 ? CA ASP 414 A 1 
HETATM 3 C C ASP . . . C 2 18.827 4.732 56.639 1 53.54 ? C ASP 414 A 1 
HETATM 4 O O ASP . . . C 2 20.077 4.533 56.707 1 54.34 ? O ASP 414 A 1 
HETATM 5 C CB ASP . . . C 2 18.869 7.169 56.094 1 52.73 ? CB ASP 414 A 1 
HETATM 6 C CG ASP . . . C 2 18.18 7.847 57.262 1 53.14 ? CG ASP 414 A 1 
HETATM 7 O OD1 ASP . . . C 2 18.799 8.011 58.337 1 54.43 ? OD1 ASP 414 A 1 
HETATM 8 O OD2 ASP . . . C 2 17.011 8.278 57.106 1 56.88 ? OD2 ASP 414 A 1 
HETATM 9 O OXT ASP . . . C 2 18.023 4.024 57.287 1 58.31 ? OXT ASP 414 A 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           9 
#