data_1GCW
#
_model_server_result.job_id            seRStzAiUyjKYQiX3xPo3g 
_model_server_result.datetime_utc      '2025-07-19 20:16:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1gcw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":136}' 
#
_entry.id    1GCW 
#
_exptl.entry_id    1GCW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1GCW 
_cell.length_a            66.7 
_cell.length_b            80.45 
_cell.length_c            114.83 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1GCW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
? 3 I N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 E FE HEM . A HEM 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? 
metalc ? metalc2 E FE HEM . A HEM 141 1_555 F C CMO . A CMO 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? 
metalc ? metalc3 B NE2 HIS 82 B HIS 82 1_555 G FE HEM . B HEM 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? 
metalc ? metalc4 G FE HEM . B HEM 136 1_555 H C CMO . B CMO 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? 
metalc ? metalc5 C NE2 HIS 87 C HIS 87 1_555 I FE HEM . C HEM 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc6 I FE HEM . C HEM 141 1_555 J C CMO . C CMO 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? 
metalc ? metalc7 D NE2 HIS 82 D HIS 82 1_555 K FE HEM . D HEM 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc8 K FE HEM . D HEM 136 1_555 L C CMO . D CMO 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 130 n n 
CHA C4D HEM doub 131 n n 
CHA HHA HEM sing 132 n n 
CHB C4A HEM sing 133 n n 
CHB C1B HEM doub 134 n n 
CHB HHB HEM sing 135 n n 
CHC C4B HEM sing 136 n n 
CHC C1C HEM doub 137 n n 
CHC HHC HEM sing 138 n n 
CHD C4C HEM doub 139 n n 
CHD C1D HEM sing 140 n n 
CHD HHD HEM sing 141 n n 
C1A C2A HEM doub 142 n y 
C1A NA HEM sing 143 n y 
C2A C3A HEM sing 144 n y 
C2A CAA HEM sing 145 n n 
C3A C4A HEM doub 146 n y 
C3A CMA HEM sing 147 n n 
C4A NA HEM sing 148 n y 
CMA HMA HEM sing 149 n n 
CMA HMAA HEM sing 150 n n 
CMA HMAB HEM sing 151 n n 
CAA CBA HEM sing 152 n n 
CAA HAA HEM sing 153 n n 
CAA HAAA HEM sing 154 n n 
CBA CGA HEM sing 155 n n 
CBA HBA HEM sing 156 n n 
CBA HBAA HEM sing 157 n n 
CGA O1A HEM doub 158 n n 
CGA O2A HEM sing 159 n n 
C1B C2B HEM sing 160 n n 
C1B NB HEM sing 161 n n 
C2B C3B HEM doub 162 n n 
C2B CMB HEM sing 163 n n 
C3B C4B HEM sing 164 n n 
C3B CAB HEM sing 165 n n 
C4B NB HEM doub 166 n n 
CMB HMB HEM sing 167 n n 
CMB HMBA HEM sing 168 n n 
CMB HMBB HEM sing 169 n n 
CAB CBB HEM doub 170 n n 
CAB HAB HEM sing 171 n n 
CBB HBB HEM sing 172 n n 
CBB HBBA HEM sing 173 n n 
C1C C2C HEM sing 174 n y 
C1C NC HEM sing 175 n y 
C2C C3C HEM doub 176 n y 
C2C CMC HEM sing 177 n n 
C3C C4C HEM sing 178 n y 
C3C CAC HEM sing 179 n n 
C4C NC HEM sing 180 n y 
CMC HMC HEM sing 181 n n 
CMC HMCA HEM sing 182 n n 
CMC HMCB HEM sing 183 n n 
CAC CBC HEM doub 184 n n 
CAC HAC HEM sing 185 n n 
CBC HBC HEM sing 186 n n 
CBC HBCA HEM sing 187 n n 
C1D C2D HEM sing 188 n n 
C1D ND HEM doub 189 n n 
C2D C3D HEM doub 190 n n 
C2D CMD HEM sing 191 n n 
C3D C4D HEM sing 192 n n 
C3D CAD HEM sing 193 n n 
C4D ND HEM sing 194 n n 
CMD HMD HEM sing 195 n n 
CMD HMDA HEM sing 196 n n 
CMD HMDB HEM sing 197 n n 
CAD CBD HEM sing 198 n n 
CAD HAD HEM sing 199 n n 
CAD HADA HEM sing 200 n n 
CBD CGD HEM sing 201 n n 
CBD HBD HEM sing 202 n n 
CBD HBDA HEM sing 203 n n 
CGD O1D HEM doub 204 n n 
CGD O2D HEM sing 205 n n 
O2A H2A HEM sing 206 n n 
O2D H2D HEM sing 207 n n 
FE NA HEM sing 208 n n 
FE NB HEM sing 209 n n 
FE NC HEM sing 210 n n 
FE ND HEM sing 211 n n 
#
_atom_sites.entry_id                     1GCW 
_atom_sites.fract_transf_matrix[1][1]    0.014993 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01243 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008709 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 HEM A 1 141 141 HEM HEM . 
F 4 CMO A 1 142 142 CMO CMO . 
G 3 HEM B 1 136 134 HEM HEM . 
H 4 CMO B 1 137 135 CMO CMO . 
I 3 HEM C 1 141 141 HEM HEM . 
J 4 CMO C 1 142 142 CMO CMO . 
K 3 HEM D 1 136 134 HEM HEM . 
L 4 CMO D 1 137 135 CMO CMO . 
M 5 HOH A 1 1001 1001 HOH HOH . 
M 5 HOH A 2 1002 1002 HOH HOH . 
M 5 HOH A 3 1003 1003 HOH HOH . 
M 5 HOH A 4 1004 1004 HOH HOH . 
M 5 HOH A 5 1005 1005 HOH HOH . 
M 5 HOH A 6 1006 1006 HOH HOH . 
M 5 HOH A 7 1007 1007 HOH HOH . 
M 5 HOH A 8 1008 1008 HOH HOH . 
M 5 HOH A 9 1010 1010 HOH HOH . 
M 5 HOH A 10 1012 1012 HOH HOH . 
M 5 HOH A 11 1013 1013 HOH HOH . 
M 5 HOH A 12 1014 1014 HOH HOH . 
M 5 HOH A 13 1015 1015 HOH HOH . 
M 5 HOH A 14 1029 1029 HOH HOH . 
M 5 HOH A 15 1030 1030 HOH HOH . 
M 5 HOH A 16 1031 1031 HOH HOH . 
M 5 HOH A 17 1032 1032 HOH HOH . 
M 5 HOH A 18 1033 1033 HOH HOH . 
M 5 HOH A 19 1034 1034 HOH HOH . 
M 5 HOH A 20 1035 1035 HOH HOH . 
M 5 HOH A 21 1038 1038 HOH HOH . 
M 5 HOH A 22 1039 1039 HOH HOH . 
N 5 HOH B 1 1011 1011 HOH HOH . 
N 5 HOH B 2 1016 1016 HOH HOH . 
N 5 HOH B 3 1017 1017 HOH HOH . 
N 5 HOH B 4 1018 1018 HOH HOH . 
N 5 HOH B 5 1019 1019 HOH HOH . 
N 5 HOH B 6 1020 1020 HOH HOH . 
N 5 HOH B 7 1040 1040 HOH HOH . 
N 5 HOH B 8 1041 1041 HOH HOH . 
N 5 HOH B 9 1042 1042 HOH HOH . 
N 5 HOH B 10 1043 1043 HOH HOH . 
N 5 HOH B 11 1044 1044 HOH HOH . 
N 5 HOH B 12 1045 1045 HOH HOH . 
N 5 HOH B 13 1046 1046 HOH HOH . 
N 5 HOH B 14 1047 1047 HOH HOH . 
N 5 HOH B 15 1049 1049 HOH HOH . 
N 5 HOH B 16 1050 1050 HOH HOH . 
N 5 HOH B 17 1051 1051 HOH HOH . 
N 5 HOH B 18 1052 1052 HOH HOH . 
O 5 HOH C 1 1021 1021 HOH HOH . 
O 5 HOH C 2 1022 1022 HOH HOH . 
O 5 HOH C 3 1023 1023 HOH HOH . 
O 5 HOH C 4 1024 1024 HOH HOH . 
O 5 HOH C 5 1025 1025 HOH HOH . 
O 5 HOH C 6 1026 1026 HOH HOH . 
O 5 HOH C 7 1048 1048 HOH HOH . 
O 5 HOH C 8 1053 1053 HOH HOH . 
O 5 HOH C 9 1055 1055 HOH HOH . 
O 5 HOH C 10 1056 1056 HOH HOH . 
O 5 HOH C 11 1058 1058 HOH HOH . 
O 5 HOH C 12 1059 1059 HOH HOH . 
O 5 HOH C 13 1060 1060 HOH HOH . 
O 5 HOH C 14 1062 1062 HOH HOH . 
O 5 HOH C 15 1063 1063 HOH HOH . 
P 5 HOH D 1 1009 1009 HOH HOH . 
P 5 HOH D 2 1027 1027 HOH HOH . 
P 5 HOH D 3 1028 1028 HOH HOH . 
P 5 HOH D 4 1036 1036 HOH HOH . 
P 5 HOH D 5 1037 1037 HOH HOH . 
P 5 HOH D 6 1054 1054 HOH HOH . 
P 5 HOH D 7 1057 1057 HOH HOH . 
P 5 HOH D 8 1061 1061 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . K 3 4.859 38.977 23.941 1 53.01 ? CHA HEM 136 D 1 
HETATM 2 C CHB HEM . . . K 3 2.37 38.587 28.135 1 43.93 ? CHB HEM 136 D 1 
HETATM 3 C CHC HEM . . . K 3 6.498 39.22 30.638 1 38.01 ? CHC HEM 136 D 1 
HETATM 4 C CHD HEM . . . K 3 8.971 39.861 26.469 1 46.52 ? CHD HEM 136 D 1 
HETATM 5 C C1A HEM . . . K 3 3.812 38.82 24.877 1 52.16 ? C1A HEM 136 D 1 
HETATM 6 C C2A HEM . . . K 3 2.434 38.467 24.523 1 53.88 ? C2A HEM 136 D 1 
HETATM 7 C C3A HEM . . . K 3 1.758 38.406 25.725 1 50.65 ? C3A HEM 136 D 1 
HETATM 8 C C4A HEM . . . K 3 2.684 38.71 26.79 1 45.91 ? C4A HEM 136 D 1 
HETATM 9 C CMA HEM . . . K 3 0.277 38.09 25.918 1 47.66 ? CMA HEM 136 D 1 
HETATM 10 C CAA HEM . . . K 3 1.815 38.278 23.12 1 57.12 ? CAA HEM 136 D 1 
HETATM 11 C CBA HEM . . . K 3 2.583 37.452 22.09 1 63.95 ? CBA HEM 136 D 1 
HETATM 12 C CGA HEM . . . K 3 1.769 36.306 21.519 1 68.09 ? CGA HEM 136 D 1 
HETATM 13 O O1A HEM . . . K 3 0.618 36.105 21.963 1 70.91 ? O1A HEM 136 D 1 
HETATM 14 O O2A HEM . . . K 3 2.284 35.603 20.623 1 69.09 ? O2A HEM 136 D 1 
HETATM 15 C C1B HEM . . . K 3 3.308 38.697 29.152 1 41.23 ? C1B HEM 136 D 1 
HETATM 16 C C2B HEM . . . K 3 2.965 38.661 30.552 1 42.07 ? C2B HEM 136 D 1 
HETATM 17 C C3B HEM . . . K 3 4.116 38.844 31.25 1 40.61 ? C3B HEM 136 D 1 
HETATM 18 C C4B HEM . . . K 3 5.179 38.951 30.289 1 37.18 ? C4B HEM 136 D 1 
HETATM 19 C CMB HEM . . . K 3 1.561 38.47 31.136 1 42.12 ? CMB HEM 136 D 1 
HETATM 20 C CAB HEM . . . K 3 4.208 38.959 32.63 1 43.65 ? CAB HEM 136 D 1 
HETATM 21 C CBB HEM . . . K 3 4.699 37.909 33.428 1 50.29 ? CBB HEM 136 D 1 
HETATM 22 C C1C HEM . . . K 3 7.478 39.564 29.713 1 41.2 ? C1C HEM 136 D 1 
HETATM 23 C C2C HEM . . . K 3 8.761 40.095 30.086 1 41.59 ? C2C HEM 136 D 1 
HETATM 24 C C3C HEM . . . K 3 9.482 40.283 28.921 1 41.19 ? C3C HEM 136 D 1 
HETATM 25 C C4C HEM . . . K 3 8.595 39.898 27.824 1 42.66 ? C4C HEM 136 D 1 
HETATM 26 C CMC HEM . . . K 3 9.154 40.447 31.521 1 43.03 ? CMC HEM 136 D 1 
HETATM 27 C CAC HEM . . . K 3 10.804 40.71 28.743 1 38.33 ? CAC HEM 136 D 1 
HETATM 28 C CBC HEM . . . K 3 11.69 41.229 29.707 1 39.31 ? CBC HEM 136 D 1 
HETATM 29 C C1D HEM . . . K 3 8.052 39.629 25.43 1 50.2 ? C1D HEM 136 D 1 
HETATM 30 C C2D HEM . . . K 3 8.361 39.768 24.018 1 51.53 ? C2D HEM 136 D 1 
HETATM 31 C C3D HEM . . . K 3 7.226 39.558 23.317 1 55.99 ? C3D HEM 136 D 1 
HETATM 32 C C4D HEM . . . K 3 6.185 39.275 24.28 1 54.34 ? C4D HEM 136 D 1 
HETATM 33 C CMD HEM . . . K 3 9.702 40.119 23.39 1 50.74 ? CMD HEM 136 D 1 
HETATM 34 C CAD HEM . . . K 3 7.137 39.55 21.794 1 63.75 ? CAD HEM 136 D 1 
HETATM 35 C CBD HEM . . . K 3 6.248 40.582 21.123 1 72.4 ? CBD HEM 136 D 1 
HETATM 36 C CGD HEM . . . K 3 5.607 40.051 19.848 1 78.03 ? CGD HEM 136 D 1 
HETATM 37 O O1D HEM . . . K 3 6.114 40.369 18.749 1 79.5 ? O1D HEM 136 D 1 
HETATM 38 O O2D HEM . . . K 3 4.598 39.314 19.946 1 78.23 ? O2D HEM 136 D 1 
HETATM 39 N NA HEM . . . K 3 3.958 38.938 26.28 1 47.52 ? NA HEM 136 D 1 
HETATM 40 N NB HEM . . . K 3 4.667 38.909 28.982 1 41.54 ? NB HEM 136 D 1 
HETATM 41 N NC HEM . . . K 3 7.329 39.535 28.311 1 44.48 ? NC HEM 136 D 1 
HETATM 42 N ND HEM . . . K 3 6.684 39.358 25.596 1 50.37 ? ND HEM 136 D 1 
HETATM 43 FE FE HEM . . . K 3 5.642 39.182 27.276 1 44.67 ? FE HEM 136 D 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           43 
#