data_1GDD # _model_server_result.job_id Qg7jTOjjpSNUiK_HifDpgQ _model_server_result.datetime_utc '2024-11-15 15:51:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gdd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":356}' # _entry.id 1GDD # _exptl.entry_id 1GDD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GDD _cell.length_a 121.84 _cell.length_b 121.84 _cell.length_c 68.39 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GDD _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 335 n n S O2 SO4 doub 336 n n S O3 SO4 sing 337 n n S O4 SO4 sing 338 n n # _atom_sites.entry_id 1GDD _atom_sites.fract_transf_matrix[1][1] 0.008207 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008207 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014622 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 356 356 SO4 SO4 . C 3 GDP A 1 355 355 GDP GDP . D 4 HOH A 1 401 401 HOH HOH . D 4 HOH A 2 402 402 HOH HOH . D 4 HOH A 3 403 403 HOH HOH . D 4 HOH A 4 404 404 HOH HOH . D 4 HOH A 5 407 407 HOH HOH . D 4 HOH A 6 410 410 HOH HOH . D 4 HOH A 7 411 411 HOH HOH . D 4 HOH A 8 415 415 HOH HOH . D 4 HOH A 9 416 416 HOH HOH . D 4 HOH A 10 417 417 HOH HOH . D 4 HOH A 11 418 418 HOH HOH . D 4 HOH A 12 421 421 HOH HOH . D 4 HOH A 13 422 422 HOH HOH . D 4 HOH A 14 434 434 HOH HOH . D 4 HOH A 15 439 439 HOH HOH . D 4 HOH A 16 453 453 HOH HOH . D 4 HOH A 17 459 459 HOH HOH . D 4 HOH A 18 460 460 HOH HOH . D 4 HOH A 19 472 472 HOH HOH . D 4 HOH A 20 477 477 HOH HOH . D 4 HOH A 21 481 481 HOH HOH . D 4 HOH A 22 484 484 HOH HOH . D 4 HOH A 23 489 489 HOH HOH . D 4 HOH A 24 491 491 HOH HOH . D 4 HOH A 25 499 499 HOH HOH . D 4 HOH A 26 508 508 HOH HOH . D 4 HOH A 27 516 516 HOH HOH . D 4 HOH A 28 600 600 HOH HOH . D 4 HOH A 29 601 601 HOH HOH . D 4 HOH A 30 602 602 HOH HOH . D 4 HOH A 31 603 603 HOH HOH . D 4 HOH A 32 604 604 HOH HOH . D 4 HOH A 33 605 605 HOH HOH . D 4 HOH A 34 606 606 HOH HOH . D 4 HOH A 35 607 607 HOH HOH . D 4 HOH A 36 608 608 HOH HOH . D 4 HOH A 37 609 609 HOH HOH . D 4 HOH A 38 610 610 HOH HOH . D 4 HOH A 39 611 611 HOH HOH . D 4 HOH A 40 612 612 HOH HOH . D 4 HOH A 41 613 613 HOH HOH . D 4 HOH A 42 614 614 HOH HOH . D 4 HOH A 43 615 615 HOH HOH . D 4 HOH A 44 616 616 HOH HOH . D 4 HOH A 45 617 617 HOH HOH . D 4 HOH A 46 618 618 HOH HOH . D 4 HOH A 47 619 619 HOH HOH . D 4 HOH A 48 620 620 HOH HOH . D 4 HOH A 49 621 621 HOH HOH . D 4 HOH A 50 622 622 HOH HOH . D 4 HOH A 51 623 623 HOH HOH . D 4 HOH A 52 624 624 HOH HOH . D 4 HOH A 53 625 625 HOH HOH . D 4 HOH A 54 626 626 HOH HOH . D 4 HOH A 55 627 627 HOH HOH . D 4 HOH A 56 628 628 HOH HOH . D 4 HOH A 57 629 629 HOH HOH . D 4 HOH A 58 630 630 HOH HOH . D 4 HOH A 59 631 631 HOH HOH . D 4 HOH A 60 632 632 HOH HOH . D 4 HOH A 61 633 633 HOH HOH . D 4 HOH A 62 634 634 HOH HOH . D 4 HOH A 63 635 635 HOH HOH . D 4 HOH A 64 636 636 HOH HOH . D 4 HOH A 65 637 637 HOH HOH . D 4 HOH A 66 638 638 HOH HOH . D 4 HOH A 67 639 639 HOH HOH . D 4 HOH A 68 640 640 HOH HOH . D 4 HOH A 69 641 641 HOH HOH . D 4 HOH A 70 642 642 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 17.215 33.219 15.717 1 45.94 ? S SO4 356 A 1 HETATM 2 O O1 SO4 . . . B 2 17.202 33.005 14.326 1 36.44 ? O1 SO4 356 A 1 HETATM 3 O O2 SO4 . . . B 2 15.958 33.618 16.152 1 52.41 ? O2 SO4 356 A 1 HETATM 4 O O3 SO4 . . . B 2 18.191 34.165 16.18 1 47.64 ? O3 SO4 356 A 1 HETATM 5 O O4 SO4 . . . B 2 17.158 31.992 16.494 1 48.74 ? O4 SO4 356 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 5 #