data_1GDH # _model_server_result.job_id oQirY2LI5zz3dxbtk5sfXA _model_server_result.datetime_utc '2024-11-27 12:15:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gdh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":322}' # _entry.id 1GDH # _exptl.entry_id 1GDH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 102.3 _cell.angle_beta 113.73 _cell.angle_gamma 102.73 _cell.entry_id 1GDH _cell.length_a 60.41 _cell.length_b 60.53 _cell.length_c 66.29 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GDH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 1GDH _atom_sites.fract_transf_matrix[1][1] 0.016554 _atom_sites.fract_transf_matrix[1][2] 0.00374 _atom_sites.fract_transf_matrix[1][3] 0.009074 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016937 _atom_sites.fract_transf_matrix[2][3] 0.00608 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017508 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 322 322 SO4 SO4 . D 2 SO4 B 1 322 322 SO4 SO4 . E 3 HOH A 1 323 401 HOH HOH . E 3 HOH A 2 324 402 HOH HOH . E 3 HOH A 3 325 403 HOH HOH . E 3 HOH A 4 326 404 HOH HOH . E 3 HOH A 5 327 405 HOH HOH . E 3 HOH A 6 328 406 HOH HOH . E 3 HOH A 7 329 407 HOH HOH . E 3 HOH A 8 330 408 HOH HOH . E 3 HOH A 9 331 409 HOH HOH . E 3 HOH A 10 332 410 HOH HOH . E 3 HOH A 11 333 411 HOH HOH . E 3 HOH A 12 334 412 HOH HOH . E 3 HOH A 13 335 413 HOH HOH . E 3 HOH A 14 336 414 HOH HOH . E 3 HOH A 15 337 415 HOH HOH . E 3 HOH A 16 338 416 HOH HOH . E 3 HOH A 17 339 417 HOH HOH . E 3 HOH A 18 340 419 HOH HOH . E 3 HOH A 19 341 421 HOH HOH . E 3 HOH A 20 342 422 HOH HOH . E 3 HOH A 21 343 423 HOH HOH . E 3 HOH A 22 344 424 HOH HOH . E 3 HOH A 23 345 425 HOH HOH . E 3 HOH A 24 346 426 HOH HOH . E 3 HOH A 25 347 427 HOH HOH . E 3 HOH A 26 348 428 HOH HOH . E 3 HOH A 27 349 429 HOH HOH . E 3 HOH A 28 350 430 HOH HOH . E 3 HOH A 29 351 431 HOH HOH . E 3 HOH A 30 352 432 HOH HOH . E 3 HOH A 31 353 433 HOH HOH . E 3 HOH A 32 354 434 HOH HOH . E 3 HOH A 33 355 436 HOH HOH . E 3 HOH A 34 356 437 HOH HOH . E 3 HOH A 35 357 439 HOH HOH . E 3 HOH A 36 358 440 HOH HOH . E 3 HOH A 37 359 441 HOH HOH . E 3 HOH A 38 360 442 HOH HOH . E 3 HOH A 39 361 443 HOH HOH . E 3 HOH A 40 362 444 HOH HOH . E 3 HOH A 41 363 445 HOH HOH . E 3 HOH A 42 364 446 HOH HOH . E 3 HOH A 43 365 447 HOH HOH . E 3 HOH A 44 366 448 HOH HOH . E 3 HOH A 45 367 449 HOH HOH . E 3 HOH A 46 368 450 HOH HOH . E 3 HOH A 47 369 451 HOH HOH . E 3 HOH A 48 370 452 HOH HOH . E 3 HOH A 49 371 453 HOH HOH . E 3 HOH A 50 372 454 HOH HOH . E 3 HOH A 51 373 455 HOH HOH . E 3 HOH A 52 374 456 HOH HOH . E 3 HOH A 53 375 457 HOH HOH . E 3 HOH A 54 376 458 HOH HOH . E 3 HOH A 55 377 459 HOH HOH . E 3 HOH A 56 378 460 HOH HOH . E 3 HOH A 57 379 461 HOH HOH . E 3 HOH A 58 380 462 HOH HOH . E 3 HOH A 59 381 463 HOH HOH . E 3 HOH A 60 382 464 HOH HOH . E 3 HOH A 61 383 465 HOH HOH . E 3 HOH A 62 384 466 HOH HOH . E 3 HOH A 63 385 467 HOH HOH . E 3 HOH A 64 386 468 HOH HOH . E 3 HOH A 65 387 469 HOH HOH . E 3 HOH A 66 388 470 HOH HOH . E 3 HOH A 67 389 471 HOH HOH . E 3 HOH A 68 390 472 HOH HOH . E 3 HOH A 69 391 473 HOH HOH . E 3 HOH A 70 392 474 HOH HOH . E 3 HOH A 71 393 475 HOH HOH . E 3 HOH A 72 394 476 HOH HOH . E 3 HOH A 73 395 478 HOH HOH . E 3 HOH A 74 396 479 HOH HOH . E 3 HOH A 75 397 480 HOH HOH . E 3 HOH A 76 398 481 HOH HOH . E 3 HOH A 77 399 482 HOH HOH . E 3 HOH A 78 400 483 HOH HOH . E 3 HOH A 79 401 484 HOH HOH . E 3 HOH A 80 402 485 HOH HOH . E 3 HOH A 81 403 486 HOH HOH . E 3 HOH A 82 404 487 HOH HOH . E 3 HOH A 83 405 489 HOH HOH . E 3 HOH A 84 406 490 HOH HOH . E 3 HOH A 85 407 491 HOH HOH . E 3 HOH A 86 408 492 HOH HOH . E 3 HOH A 87 409 493 HOH HOH . E 3 HOH A 88 410 494 HOH HOH . E 3 HOH A 89 411 495 HOH HOH . E 3 HOH A 90 412 496 HOH HOH . E 3 HOH A 91 413 497 HOH HOH . E 3 HOH A 92 414 498 HOH HOH . E 3 HOH A 93 415 499 HOH HOH . E 3 HOH A 94 416 500 HOH HOH . E 3 HOH A 95 417 400 HOH HOH . E 3 HOH A 96 418 404 HOH HOH . E 3 HOH A 97 419 410 HOH HOH . E 3 HOH A 98 420 417 HOH HOH . E 3 HOH A 99 421 420 HOH HOH . E 3 HOH A 100 422 424 HOH HOH . F 3 HOH B 1 323 400 HOH HOH . F 3 HOH B 2 324 418 HOH HOH . F 3 HOH B 3 325 420 HOH HOH . F 3 HOH B 4 326 435 HOH HOH . F 3 HOH B 5 327 438 HOH HOH . F 3 HOH B 6 328 488 HOH HOH . F 3 HOH B 7 329 401 HOH HOH . F 3 HOH B 8 330 402 HOH HOH . F 3 HOH B 9 331 403 HOH HOH . F 3 HOH B 10 332 405 HOH HOH . F 3 HOH B 11 333 406 HOH HOH . F 3 HOH B 12 334 407 HOH HOH . F 3 HOH B 13 335 408 HOH HOH . F 3 HOH B 14 336 409 HOH HOH . F 3 HOH B 15 337 411 HOH HOH . F 3 HOH B 16 338 412 HOH HOH . F 3 HOH B 17 339 413 HOH HOH . F 3 HOH B 18 340 414 HOH HOH . F 3 HOH B 19 341 415 HOH HOH . F 3 HOH B 20 342 416 HOH HOH . F 3 HOH B 21 343 418 HOH HOH . F 3 HOH B 22 344 419 HOH HOH . F 3 HOH B 23 345 421 HOH HOH . F 3 HOH B 24 346 422 HOH HOH . F 3 HOH B 25 347 423 HOH HOH . F 3 HOH B 26 348 425 HOH HOH . F 3 HOH B 27 349 426 HOH HOH . F 3 HOH B 28 350 427 HOH HOH . F 3 HOH B 29 351 428 HOH HOH . F 3 HOH B 30 352 429 HOH HOH . F 3 HOH B 31 353 430 HOH HOH . F 3 HOH B 32 354 431 HOH HOH . F 3 HOH B 33 355 432 HOH HOH . F 3 HOH B 34 356 433 HOH HOH . F 3 HOH B 35 357 434 HOH HOH . F 3 HOH B 36 358 435 HOH HOH . F 3 HOH B 37 359 436 HOH HOH . F 3 HOH B 38 360 437 HOH HOH . F 3 HOH B 39 361 438 HOH HOH . F 3 HOH B 40 362 439 HOH HOH . F 3 HOH B 41 363 440 HOH HOH . F 3 HOH B 42 364 441 HOH HOH . F 3 HOH B 43 365 442 HOH HOH . F 3 HOH B 44 366 443 HOH HOH . F 3 HOH B 45 367 444 HOH HOH . F 3 HOH B 46 368 445 HOH HOH . F 3 HOH B 47 369 446 HOH HOH . F 3 HOH B 48 370 447 HOH HOH . F 3 HOH B 49 371 448 HOH HOH . F 3 HOH B 50 372 449 HOH HOH . F 3 HOH B 51 373 450 HOH HOH . F 3 HOH B 52 374 451 HOH HOH . F 3 HOH B 53 375 452 HOH HOH . F 3 HOH B 54 376 453 HOH HOH . F 3 HOH B 55 377 454 HOH HOH . F 3 HOH B 56 378 455 HOH HOH . F 3 HOH B 57 379 456 HOH HOH . F 3 HOH B 58 380 457 HOH HOH . F 3 HOH B 59 381 458 HOH HOH . F 3 HOH B 60 382 459 HOH HOH . F 3 HOH B 61 383 460 HOH HOH . F 3 HOH B 62 384 461 HOH HOH . F 3 HOH B 63 385 462 HOH HOH . F 3 HOH B 64 386 463 HOH HOH . F 3 HOH B 65 387 464 HOH HOH . F 3 HOH B 66 388 465 HOH HOH . F 3 HOH B 67 389 466 HOH HOH . F 3 HOH B 68 390 467 HOH HOH . F 3 HOH B 69 391 468 HOH HOH . F 3 HOH B 70 392 469 HOH HOH . F 3 HOH B 71 393 470 HOH HOH . F 3 HOH B 72 394 471 HOH HOH . F 3 HOH B 73 395 472 HOH HOH . F 3 HOH B 74 396 473 HOH HOH . F 3 HOH B 75 397 474 HOH HOH . F 3 HOH B 76 398 475 HOH HOH . F 3 HOH B 77 399 476 HOH HOH . F 3 HOH B 78 400 477 HOH HOH . F 3 HOH B 79 401 478 HOH HOH . F 3 HOH B 80 402 479 HOH HOH . F 3 HOH B 81 403 480 HOH HOH . F 3 HOH B 82 404 481 HOH HOH . F 3 HOH B 83 405 482 HOH HOH . F 3 HOH B 84 406 483 HOH HOH . F 3 HOH B 85 407 484 HOH HOH . F 3 HOH B 86 408 485 HOH HOH . F 3 HOH B 87 409 486 HOH HOH . F 3 HOH B 88 410 487 HOH HOH . F 3 HOH B 89 411 488 HOH HOH . F 3 HOH B 90 412 489 HOH HOH . F 3 HOH B 91 413 490 HOH HOH . F 3 HOH B 92 414 491 HOH HOH . F 3 HOH B 93 415 492 HOH HOH . F 3 HOH B 94 416 493 HOH HOH . F 3 HOH B 95 417 494 HOH HOH . F 3 HOH B 96 418 495 HOH HOH . F 3 HOH B 97 419 496 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 2 4.312 21.651 20.5 1 38.35 ? S SO4 322 A 1 HETATM 2 O O1 SO4 . . . C 2 3.92 22.817 19.853 1 47.13 ? O1 SO4 322 A 1 HETATM 3 O O2 SO4 . . . C 2 5.726 21.64 20.701 1 42.19 ? O2 SO4 322 A 1 HETATM 4 O O3 SO4 . . . C 2 3.638 21.789 21.739 1 42.03 ? O3 SO4 322 A 1 HETATM 5 O O4 SO4 . . . C 2 4.008 20.466 19.733 1 42.02 ? O4 SO4 322 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 5 #