data_1GDI # _model_server_result.job_id u6QBn9LCWG1u5THZQ4JeJQ _model_server_result.datetime_utc '2025-03-12 20:07:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gdi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":155}' # _entry.id 1GDI # _exptl.entry_id 1GDI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 28.01 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CARBON MONOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.8 _cell.angle_gamma 90 _cell.entry_id 1GDI _cell.length_a 93.19 _cell.length_b 51.95 _cell.length_c 38.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GDI _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 97 A HIS 97 1_555 B FE HEM . A HEM 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc2 B FE HEM . A HEM 154 1_555 C C CMO . A CMO 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? # _chem_comp.formula 'C O' _chem_comp.formula_weight 28.01 _chem_comp.id CMO _chem_comp.mon_nstd_flag . _chem_comp.name 'CARBON MONOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 C _chem_comp_bond.atom_id_2 O _chem_comp_bond.comp_id CMO _chem_comp_bond.value_order trip _chem_comp_bond.pdbx_ordinal 70 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 1GDI _atom_sites.fract_transf_matrix[1][1] 0.010731 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001661 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019249 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026421 _atom_sites.fract_transf_vector[1] -0.25 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 154 154 HEM HEM . C 3 CMO A 1 155 154 CMO CMO . D 4 HOH A 1 156 156 HOH HOH . D 4 HOH A 2 157 157 HOH HOH . D 4 HOH A 3 158 158 HOH HOH . D 4 HOH A 4 159 159 HOH HOH . D 4 HOH A 5 160 160 HOH HOH . D 4 HOH A 6 161 161 HOH HOH . D 4 HOH A 7 162 162 HOH HOH . D 4 HOH A 8 163 163 HOH HOH . D 4 HOH A 9 164 164 HOH HOH . D 4 HOH A 10 165 165 HOH HOH . D 4 HOH A 11 166 166 HOH HOH . D 4 HOH A 12 167 167 HOH HOH . D 4 HOH A 13 168 168 HOH HOH . D 4 HOH A 14 169 169 HOH HOH . D 4 HOH A 15 170 170 HOH HOH . D 4 HOH A 16 171 171 HOH HOH . D 4 HOH A 17 172 172 HOH HOH . D 4 HOH A 18 173 173 HOH HOH . D 4 HOH A 19 174 174 HOH HOH . D 4 HOH A 20 175 175 HOH HOH . D 4 HOH A 21 176 176 HOH HOH . D 4 HOH A 22 177 177 HOH HOH . D 4 HOH A 23 178 178 HOH HOH . D 4 HOH A 24 179 179 HOH HOH . D 4 HOH A 25 180 180 HOH HOH . D 4 HOH A 26 181 181 HOH HOH . D 4 HOH A 27 182 182 HOH HOH . D 4 HOH A 28 183 183 HOH HOH . D 4 HOH A 29 184 184 HOH HOH . D 4 HOH A 30 185 185 HOH HOH . D 4 HOH A 31 186 186 HOH HOH . D 4 HOH A 32 187 187 HOH HOH . D 4 HOH A 33 188 188 HOH HOH . D 4 HOH A 34 189 189 HOH HOH . D 4 HOH A 35 190 190 HOH HOH . D 4 HOH A 36 191 191 HOH HOH . D 4 HOH A 37 192 192 HOH HOH . D 4 HOH A 38 193 193 HOH HOH . D 4 HOH A 39 195 195 HOH HOH . D 4 HOH A 40 196 196 HOH HOH . D 4 HOH A 41 197 197 HOH HOH . D 4 HOH A 42 198 198 HOH HOH . D 4 HOH A 43 199 199 HOH HOH . D 4 HOH A 44 200 200 HOH HOH . D 4 HOH A 45 201 201 HOH HOH . D 4 HOH A 46 206 206 HOH HOH . D 4 HOH A 47 207 207 HOH HOH . D 4 HOH A 48 209 209 HOH HOH . D 4 HOH A 49 210 210 HOH HOH . D 4 HOH A 50 211 211 HOH HOH . D 4 HOH A 51 212 212 HOH HOH . D 4 HOH A 52 213 213 HOH HOH . D 4 HOH A 53 214 214 HOH HOH . D 4 HOH A 54 215 215 HOH HOH . D 4 HOH A 55 217 217 HOH HOH . D 4 HOH A 56 218 218 HOH HOH . D 4 HOH A 57 219 219 HOH HOH . D 4 HOH A 58 222 222 HOH HOH . D 4 HOH A 59 225 225 HOH HOH . D 4 HOH A 60 226 226 HOH HOH . D 4 HOH A 61 228 228 HOH HOH . D 4 HOH A 62 229 229 HOH HOH . D 4 HOH A 63 230 230 HOH HOH . D 4 HOH A 64 232 232 HOH HOH . D 4 HOH A 65 233 233 HOH HOH . D 4 HOH A 66 234 234 HOH HOH . D 4 HOH A 67 238 238 HOH HOH . D 4 HOH A 68 239 239 HOH HOH . D 4 HOH A 69 242 242 HOH HOH . D 4 HOH A 70 245 245 HOH HOH . D 4 HOH A 71 246 246 HOH HOH . D 4 HOH A 72 247 247 HOH HOH . D 4 HOH A 73 250 250 HOH HOH . D 4 HOH A 74 251 251 HOH HOH . D 4 HOH A 75 252 252 HOH HOH . D 4 HOH A 76 253 253 HOH HOH . D 4 HOH A 77 254 254 HOH HOH . D 4 HOH A 78 256 256 HOH HOH . D 4 HOH A 79 257 257 HOH HOH . D 4 HOH A 80 258 258 HOH HOH . D 4 HOH A 81 260 260 HOH HOH . D 4 HOH A 82 262 262 HOH HOH . D 4 HOH A 83 263 263 HOH HOH . D 4 HOH A 84 265 265 HOH HOH . D 4 HOH A 85 266 266 HOH HOH . D 4 HOH A 86 267 267 HOH HOH . D 4 HOH A 87 268 268 HOH HOH . D 4 HOH A 88 269 269 HOH HOH . D 4 HOH A 89 270 270 HOH HOH . D 4 HOH A 90 271 271 HOH HOH . D 4 HOH A 91 273 273 HOH HOH . D 4 HOH A 92 276 276 HOH HOH . D 4 HOH A 93 277 277 HOH HOH . D 4 HOH A 94 278 278 HOH HOH . D 4 HOH A 95 281 281 HOH HOH . D 4 HOH A 96 282 282 HOH HOH . D 4 HOH A 97 286 286 HOH HOH . D 4 HOH A 98 287 287 HOH HOH . D 4 HOH A 99 288 288 HOH HOH . D 4 HOH A 100 291 291 HOH HOH . D 4 HOH A 101 292 292 HOH HOH . D 4 HOH A 102 300 300 HOH HOH . D 4 HOH A 103 301 301 HOH HOH . D 4 HOH A 104 310 310 HOH HOH . D 4 HOH A 105 311 311 HOH HOH . D 4 HOH A 106 312 312 HOH HOH . D 4 HOH A 107 313 313 HOH HOH . D 4 HOH A 108 314 314 HOH HOH . D 4 HOH A 109 315 315 HOH HOH . D 4 HOH A 110 316 316 HOH HOH . D 4 HOH A 111 318 318 HOH HOH . D 4 HOH A 112 319 319 HOH HOH . D 4 HOH A 113 322 322 HOH HOH . D 4 HOH A 114 325 325 HOH HOH . D 4 HOH A 115 326 326 HOH HOH . D 4 HOH A 116 327 327 HOH HOH . D 4 HOH A 117 328 328 HOH HOH . D 4 HOH A 118 331 331 HOH HOH . D 4 HOH A 119 333 333 HOH HOH . D 4 HOH A 120 336 336 HOH HOH . D 4 HOH A 121 339 339 HOH HOH . D 4 HOH A 122 342 342 HOH HOH . D 4 HOH A 123 344 344 HOH HOH . D 4 HOH A 124 345 345 HOH HOH . D 4 HOH A 125 351 351 HOH HOH . D 4 HOH A 126 353 353 HOH HOH . D 4 HOH A 127 358 358 HOH HOH . D 4 HOH A 128 368 368 HOH HOH . D 4 HOH A 129 371 371 HOH HOH . D 4 HOH A 130 376 376 HOH HOH . D 4 HOH A 131 377 377 HOH HOH . D 4 HOH A 132 382 382 HOH HOH . D 4 HOH A 133 390 390 HOH HOH . D 4 HOH A 134 393 393 HOH HOH . D 4 HOH A 135 395 395 HOH HOH . D 4 HOH A 136 396 396 HOH HOH . D 4 HOH A 137 397 397 HOH HOH . D 4 HOH A 138 401 401 HOH HOH . D 4 HOH A 139 402 402 HOH HOH . D 4 HOH A 140 403 403 HOH HOH . D 4 HOH A 141 406 406 HOH HOH . D 4 HOH A 142 407 407 HOH HOH . D 4 HOH A 143 412 412 HOH HOH . D 4 HOH A 144 415 415 HOH HOH . D 4 HOH A 145 418 418 HOH HOH . D 4 HOH A 146 421 421 HOH HOH . D 4 HOH A 147 429 429 HOH HOH . D 4 HOH A 148 430 430 HOH HOH . D 4 HOH A 149 431 431 HOH HOH . D 4 HOH A 150 433 433 HOH HOH . D 4 HOH A 151 434 434 HOH HOH . D 4 HOH A 152 436 436 HOH HOH . D 4 HOH A 153 437 437 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C CMO . . . C 3 39.691 -29.997 27.182 1 4.8 ? C CMO 155 A 1 HETATM 2 O O CMO . . . C 3 40.721 -30.884 26.961 1 15.26 ? O CMO 155 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 2 #