data_1GEN # _model_server_result.job_id Oz4doGKZEJvcuJ-9vrZBuQ _model_server_result.datetime_utc '2025-02-28 01:56:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gen # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 1GEN # _exptl.entry_id 1GEN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GEN _cell.length_a 57.9 _cell.length_b 77.4 _cell.length_c 53.4 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GEN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 27 A CYS 469 1_555 A SG CYS 218 A CYS 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc1 B ZN ZN . A ZN 301 1_555 A OE2 GLU 25 A GLU 467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc2 B ZN ZN . A ZN 301 1_555 A NE2 HIS 186 A HIS 628 2_554 ? ? ? ? ? ? ? ? ? ? ? ? 1.69 ? metalc ? metalc3 B ZN ZN . A ZN 301 1_555 A OE1 GLU 199 A GLU 641 2_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc4 C CA CA . A CA 302 1_555 F O HOH . A HOH 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc5 C CA CA . A CA 302 1_555 F O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc6 C CA CA . A CA 302 1_555 F O HOH . A HOH 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc7 C CA CA . A CA 302 1_555 A O ASP 34 A ASP 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc8 C CA CA . A CA 302 1_555 A O ASP 79 A ASP 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc9 C CA CA . A CA 302 1_555 A O ASP 127 A ASP 569 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc10 C CA CA . A CA 302 1_555 A O ASP 176 A ASP 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc11 E NA NA . A NA 304 1_555 F O HOH . A HOH 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc12 E NA NA . A NA 304 1_555 A O ILE 36 A ILE 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc13 E NA NA . A NA 304 1_555 A O VAL 81 A VAL 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc14 E NA NA . A NA 304 1_555 A O ALA 129 A ALA 571 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc15 E NA NA . A NA 304 1_555 A O VAL 178 A VAL 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1GEN _atom_sites.fract_transf_matrix[1][1] 0.017271 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01292 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018727 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 301 ZN ZN . C 3 CA A 1 302 302 CA CA . D 4 CL A 1 303 303 CL CL . E 5 NA A 1 304 304 NA NA . F 6 HOH A 1 305 305 HOH HOH . F 6 HOH A 2 306 306 HOH HOH . F 6 HOH A 3 307 307 HOH HOH . F 6 HOH A 4 308 308 HOH HOH . F 6 HOH A 5 309 309 HOH HOH . F 6 HOH A 6 310 310 HOH HOH . F 6 HOH A 7 311 311 HOH HOH . F 6 HOH A 8 312 312 HOH HOH . F 6 HOH A 9 313 313 HOH HOH . F 6 HOH A 10 314 314 HOH HOH . F 6 HOH A 11 315 315 HOH HOH . F 6 HOH A 12 316 316 HOH HOH . F 6 HOH A 13 317 317 HOH HOH . F 6 HOH A 14 318 318 HOH HOH . F 6 HOH A 15 319 319 HOH HOH . F 6 HOH A 16 320 320 HOH HOH . F 6 HOH A 17 321 321 HOH HOH . F 6 HOH A 18 322 322 HOH HOH . F 6 HOH A 19 323 323 HOH HOH . F 6 HOH A 20 324 324 HOH HOH . F 6 HOH A 21 325 325 HOH HOH . F 6 HOH A 22 326 326 HOH HOH . F 6 HOH A 23 327 327 HOH HOH . F 6 HOH A 24 328 328 HOH HOH . F 6 HOH A 25 329 329 HOH HOH . F 6 HOH A 26 330 330 HOH HOH . F 6 HOH A 27 331 331 HOH HOH . F 6 HOH A 28 332 332 HOH HOH . F 6 HOH A 29 333 333 HOH HOH . F 6 HOH A 30 334 334 HOH HOH . F 6 HOH A 31 335 335 HOH HOH . F 6 HOH A 32 336 336 HOH HOH . F 6 HOH A 33 337 337 HOH HOH . F 6 HOH A 34 338 338 HOH HOH . F 6 HOH A 35 339 339 HOH HOH . F 6 HOH A 36 340 340 HOH HOH . F 6 HOH A 37 341 341 HOH HOH . F 6 HOH A 38 342 342 HOH HOH . F 6 HOH A 39 343 343 HOH HOH . F 6 HOH A 40 344 344 HOH HOH . F 6 HOH A 41 345 345 HOH HOH . F 6 HOH A 42 346 346 HOH HOH . F 6 HOH A 43 347 347 HOH HOH . F 6 HOH A 44 348 348 HOH HOH . F 6 HOH A 45 349 349 HOH HOH . F 6 HOH A 46 350 350 HOH HOH . F 6 HOH A 47 351 351 HOH HOH . F 6 HOH A 48 352 352 HOH HOH . F 6 HOH A 49 353 353 HOH HOH . F 6 HOH A 50 354 354 HOH HOH . F 6 HOH A 51 355 355 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 4.407 _atom_site.Cartn_y 10.535 _atom_site.Cartn_z -0.965 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 1353 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #