data_1GFN # _model_server_result.job_id m4iLd09oQ2DBBx2bkc7N-g _model_server_result.datetime_utc '2024-11-24 23:48:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gfn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":341}' # _entry.id 1GFN # _exptl.entry_id 1GFN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.438 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1GFN _cell.length_a 117.7 _cell.length_b 117.7 _cell.length_c 52.7 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GFN _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 58.85 101.93119 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -58.85 101.93119 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N # _chem_comp.formula 'C16 H34 O5' _chem_comp.formula_weight 306.438 _chem_comp.id C8E _chem_comp.mon_nstd_flag . _chem_comp.name (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 C8E sing 70 n n C1 H11 C8E sing 71 n n C1 H12 C8E sing 72 n n C1 H13 C8E sing 73 n n C2 C3 C8E sing 74 n n C2 H21 C8E sing 75 n n C2 H22 C8E sing 76 n n C3 C4 C8E sing 77 n n C3 H31 C8E sing 78 n n C3 H32 C8E sing 79 n n C4 C5 C8E sing 80 n n C4 H41 C8E sing 81 n n C4 H42 C8E sing 82 n n C5 C6 C8E sing 83 n n C5 H51 C8E sing 84 n n C5 H52 C8E sing 85 n n C6 C7 C8E sing 86 n n C6 H61 C8E sing 87 n n C6 H62 C8E sing 88 n n C7 C8 C8E sing 89 n n C7 H71 C8E sing 90 n n C7 H72 C8E sing 91 n n C8 O9 C8E sing 92 n n C8 H81 C8E sing 93 n n C8 H82 C8E sing 94 n n O9 C10 C8E sing 95 n n C10 C11 C8E sing 96 n n C10 H101 C8E sing 97 n n C10 H102 C8E sing 98 n n C11 O12 C8E sing 99 n n C11 H111 C8E sing 100 n n C11 H112 C8E sing 101 n n O12 C13 C8E sing 102 n n C13 C14 C8E sing 103 n n C13 H131 C8E sing 104 n n C13 H132 C8E sing 105 n n C14 O15 C8E sing 106 n n C14 H141 C8E sing 107 n n C14 H142 C8E sing 108 n n O15 C16 C8E sing 109 n n C16 C17 C8E sing 110 n n C16 H161 C8E sing 111 n n C16 H162 C8E sing 112 n n C17 O18 C8E sing 113 n n C17 H171 C8E sing 114 n n C17 H172 C8E sing 115 n n O18 C19 C8E sing 116 n n C19 C20 C8E sing 117 n n C19 H191 C8E sing 118 n n C19 H192 C8E sing 119 n n C20 O21 C8E sing 120 n n C20 H201 C8E sing 121 n n C20 H202 C8E sing 122 n n O21 HO2 C8E sing 123 n n # _atom_sites.entry_id 1GFN _atom_sites.fract_transf_matrix[1][1] 0.008496 _atom_sites.fract_transf_matrix[1][2] 0.004905 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009811 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018975 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 C8E A 1 341 341 C8E C8E . C 2 C8E A 1 342 342 C8E C8E . D 2 C8E A 1 343 343 C8E C8E . E 2 C8E A 1 344 344 C8E C8E . F 2 C8E A 1 345 345 C8E C8E . G 2 C8E A 1 346 346 C8E C8E . H 2 C8E A 1 347 347 C8E C8E . I 2 C8E A 1 348 348 C8E C8E . J 2 C8E A 1 349 349 C8E C8E . K 2 C8E A 1 350 350 C8E C8E . L 2 C8E A 1 353 353 C8E C8E . M 2 C8E A 1 354 354 C8E C8E . N 3 HOH A 1 401 401 HOH HOH . N 3 HOH A 2 402 402 HOH HOH . N 3 HOH A 3 403 403 HOH HOH . N 3 HOH A 4 404 404 HOH HOH . N 3 HOH A 5 406 406 HOH HOH . N 3 HOH A 6 407 407 HOH HOH . N 3 HOH A 7 409 409 HOH HOH . N 3 HOH A 8 410 410 HOH HOH . N 3 HOH A 9 411 411 HOH HOH . N 3 HOH A 10 412 412 HOH HOH . N 3 HOH A 11 413 413 HOH HOH . N 3 HOH A 12 415 415 HOH HOH . N 3 HOH A 13 416 416 HOH HOH . N 3 HOH A 14 418 418 HOH HOH . N 3 HOH A 15 419 419 HOH HOH . N 3 HOH A 16 420 420 HOH HOH . N 3 HOH A 17 421 421 HOH HOH . N 3 HOH A 18 422 422 HOH HOH . N 3 HOH A 19 423 423 HOH HOH . N 3 HOH A 20 424 424 HOH HOH . N 3 HOH A 21 425 425 HOH HOH . N 3 HOH A 22 426 426 HOH HOH . N 3 HOH A 23 427 427 HOH HOH . N 3 HOH A 24 428 428 HOH HOH . N 3 HOH A 25 430 430 HOH HOH . N 3 HOH A 26 431 431 HOH HOH . N 3 HOH A 27 434 434 HOH HOH . N 3 HOH A 28 435 435 HOH HOH . N 3 HOH A 29 436 436 HOH HOH . N 3 HOH A 30 437 437 HOH HOH . N 3 HOH A 31 438 438 HOH HOH . N 3 HOH A 32 439 439 HOH HOH . N 3 HOH A 33 440 440 HOH HOH . N 3 HOH A 34 441 441 HOH HOH . N 3 HOH A 35 442 442 HOH HOH . N 3 HOH A 36 443 443 HOH HOH . N 3 HOH A 37 444 444 HOH HOH . N 3 HOH A 38 445 445 HOH HOH . N 3 HOH A 39 446 446 HOH HOH . N 3 HOH A 40 447 447 HOH HOH . N 3 HOH A 41 448 448 HOH HOH . N 3 HOH A 42 449 449 HOH HOH . N 3 HOH A 43 450 450 HOH HOH . N 3 HOH A 44 451 451 HOH HOH . N 3 HOH A 45 452 452 HOH HOH . N 3 HOH A 46 453 453 HOH HOH . N 3 HOH A 47 454 454 HOH HOH . N 3 HOH A 48 456 456 HOH HOH . N 3 HOH A 49 457 457 HOH HOH . N 3 HOH A 50 458 458 HOH HOH . N 3 HOH A 51 460 460 HOH HOH . N 3 HOH A 52 461 461 HOH HOH . N 3 HOH A 53 462 462 HOH HOH . N 3 HOH A 54 464 464 HOH HOH . N 3 HOH A 55 465 465 HOH HOH . N 3 HOH A 56 466 466 HOH HOH . N 3 HOH A 57 467 467 HOH HOH . N 3 HOH A 58 469 469 HOH HOH . N 3 HOH A 59 470 470 HOH HOH . N 3 HOH A 60 471 471 HOH HOH . N 3 HOH A 61 472 472 HOH HOH . N 3 HOH A 62 473 473 HOH HOH . N 3 HOH A 63 475 475 HOH HOH . N 3 HOH A 64 476 476 HOH HOH . N 3 HOH A 65 477 477 HOH HOH . N 3 HOH A 66 478 478 HOH HOH . N 3 HOH A 67 479 479 HOH HOH . N 3 HOH A 68 480 480 HOH HOH . N 3 HOH A 69 481 481 HOH HOH . N 3 HOH A 70 482 482 HOH HOH . N 3 HOH A 71 483 483 HOH HOH . N 3 HOH A 72 484 484 HOH HOH . N 3 HOH A 73 487 487 HOH HOH . N 3 HOH A 74 488 488 HOH HOH . N 3 HOH A 75 491 491 HOH HOH . N 3 HOH A 76 492 492 HOH HOH . N 3 HOH A 77 493 493 HOH HOH . N 3 HOH A 78 494 494 HOH HOH . N 3 HOH A 79 495 495 HOH HOH . N 3 HOH A 80 496 496 HOH HOH . N 3 HOH A 81 497 497 HOH HOH . N 3 HOH A 82 498 498 HOH HOH . N 3 HOH A 83 499 499 HOH HOH . N 3 HOH A 84 500 500 HOH HOH . N 3 HOH A 85 501 501 HOH HOH . N 3 HOH A 86 503 503 HOH HOH . N 3 HOH A 87 504 504 HOH HOH . N 3 HOH A 88 505 505 HOH HOH . N 3 HOH A 89 506 506 HOH HOH . N 3 HOH A 90 507 507 HOH HOH . N 3 HOH A 91 509 509 HOH HOH . N 3 HOH A 92 511 511 HOH HOH . N 3 HOH A 93 512 512 HOH HOH . N 3 HOH A 94 514 514 HOH HOH . N 3 HOH A 95 515 515 HOH HOH . N 3 HOH A 96 516 516 HOH HOH . N 3 HOH A 97 518 518 HOH HOH . N 3 HOH A 98 524 524 HOH HOH . N 3 HOH A 99 526 526 HOH HOH . N 3 HOH A 100 527 527 HOH HOH . N 3 HOH A 101 530 530 HOH HOH . N 3 HOH A 102 531 531 HOH HOH . N 3 HOH A 103 532 532 HOH HOH . N 3 HOH A 104 533 533 HOH HOH . N 3 HOH A 105 534 534 HOH HOH . N 3 HOH A 106 535 535 HOH HOH . N 3 HOH A 107 537 537 HOH HOH . N 3 HOH A 108 538 538 HOH HOH . N 3 HOH A 109 541 541 HOH HOH . N 3 HOH A 110 543 543 HOH HOH . N 3 HOH A 111 545 545 HOH HOH . N 3 HOH A 112 547 547 HOH HOH . N 3 HOH A 113 549 549 HOH HOH . N 3 HOH A 114 550 550 HOH HOH . N 3 HOH A 115 553 553 HOH HOH . N 3 HOH A 116 554 554 HOH HOH . N 3 HOH A 117 555 555 HOH HOH . N 3 HOH A 118 556 556 HOH HOH . N 3 HOH A 119 557 557 HOH HOH . N 3 HOH A 120 558 558 HOH HOH . N 3 HOH A 121 606 606 HOH HOH . N 3 HOH A 122 619 619 HOH HOH . N 3 HOH A 123 621 621 HOH HOH . N 3 HOH A 124 627 627 HOH HOH . N 3 HOH A 125 704 704 HOH HOH . N 3 HOH A 126 710 710 HOH HOH . N 3 HOH A 127 816 816 HOH HOH . N 3 HOH A 128 900 900 HOH HOH . N 3 HOH A 129 901 901 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C8E . . . B 2 -21.472 55.599 32.219 1 20.87 ? C1 C8E 341 A 1 HETATM 2 C C2 C8E . . . B 2 -21.867 55.396 33.676 1 25.78 ? C2 C8E 341 A 1 HETATM 3 C C3 C8E . . . B 2 -23.054 56.238 34.153 1 23.87 ? C3 C8E 341 A 1 HETATM 4 C C4 C8E . . . B 2 -23.321 56.018 35.616 1 27.74 ? C4 C8E 341 A 1 HETATM 5 C C5 C8E . . . B 2 -24.422 56.921 36.139 1 31.66 ? C5 C8E 341 A 1 HETATM 6 C C6 C8E . . . B 2 -24.646 56.691 37.626 1 39.2 ? C6 C8E 341 A 1 HETATM 7 C C7 C8E . . . B 2 -25.698 57.612 38.204 1 45.11 ? C7 C8E 341 A 1 HETATM 8 C C8 C8E . . . B 2 -25.849 57.373 39.706 1 48.79 ? C8 C8E 341 A 1 HETATM 9 O O9 C8E . . . B 2 -26.809 58.097 40.498 1 54.37 ? O9 C8E 341 A 1 HETATM 10 C C10 C8E . . . B 2 -27.661 59.072 39.862 1 48.42 ? C10 C8E 341 A 1 HETATM 11 C C11 C8E . . . B 2 -28.613 59.698 40.869 1 47.76 ? C11 C8E 341 A 1 HETATM 12 O O12 C8E . . . B 2 -29.456 60.637 40.24 1 47.49 ? O12 C8E 341 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #