data_1GFW # _model_server_result.job_id WQ4aPLSv517LvBfiOuLB6w _model_server_result.datetime_utc '2025-03-11 11:20:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gfw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 1GFW # _exptl.entry_id 1GFW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 400.448 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-METHYL-5-(2-PHENOXYMETHYL-PYRROLIDINE-1-SULFONYL)-1H-INDOLE-2,3-DIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GFW _cell.length_a 67.2 _cell.length_b 83.3 _cell.length_c 96 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GFW _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA octameric 8 software_defined_assembly 2 PISA octameric 8 software_defined_assembly 3 PISA tetrameric 4 software_defined_assembly 4 PISA tetrameric 4 software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2,3,4 A,B,C,D,E 3 1,5,3,6 A,B,C,D,E 4 1,3 A,B,C,D,E 5 1,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 67.2 83.3 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 67.2 0 96 4 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 83.3 96 5 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 67.2 0 0 6 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 96 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id C3 _struct_conn.ptnr1_label_comp_id MSI _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id MSI _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 135 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 163 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.829 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C20 H20 N2 O5 S' _chem_comp.formula_weight 400.448 _chem_comp.id MSI _chem_comp.mon_nstd_flag . _chem_comp.name 1-METHYL-5-(2-PHENOXYMETHYL-PYRROLIDINE-1-SULFONYL)-1H-INDOLE-2,3-DIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 N2 MSI sing 237 n n S1 O4 MSI doub 238 n n S1 O5 MSI doub 239 n n S1 C5 MSI sing 240 n n N1 C2 MSI sing 241 n n N1 C8 MSI sing 242 n n N1 C1 MSI sing 243 n n N2 C20 MSI sing 244 n n N2 C12 MSI sing 245 n n O1 C13 MSI sing 246 n n O1 C14 MSI sing 247 n n O2 C2 MSI doub 248 n n O3 C3 MSI doub 249 n n C2 C3 MSI sing 250 n n C3 C9 MSI sing 251 n n C4 C5 MSI doub 252 n y C4 C9 MSI sing 253 n y C4 HC4 MSI sing 254 n n C5 C6 MSI sing 255 n y C6 C7 MSI doub 256 n y C6 HC6 MSI sing 257 n n C7 C8 MSI sing 258 n y C7 HC7 MSI sing 259 n n C8 C9 MSI doub 260 n y C20 C10 MSI sing 261 n n C20 C13 MSI sing 262 n n C20 H20 MSI sing 263 n n C10 C11 MSI sing 264 n n C10 H101 MSI sing 265 n n C10 H102 MSI sing 266 n n C11 C12 MSI sing 267 n n C11 H111 MSI sing 268 n n C11 H112 MSI sing 269 n n C12 H121 MSI sing 270 n n C12 H122 MSI sing 271 n n C13 H131 MSI sing 272 n n C13 H132 MSI sing 273 n n C14 C15 MSI doub 274 n y C14 C19 MSI sing 275 n y C15 C16 MSI sing 276 n y C15 HC15 MSI sing 277 n n C16 C17 MSI doub 278 n y C16 HC16 MSI sing 279 n n C17 C18 MSI sing 280 n y C17 HC17 MSI sing 281 n n C18 C19 MSI doub 282 n y C18 HC18 MSI sing 283 n n C19 HC19 MSI sing 284 n n C1 HC11 MSI sing 285 n n C1 HC12 MSI sing 286 n n C1 HC13 MSI sing 287 n n # _atom_sites.entry_id 1GFW _atom_sites.fract_transf_matrix[1][1] 0.014881 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012005 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010417 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MSI A 1 1 1 MSI MSI . D 4 HOH A 1 176 2 HOH HOH . D 4 HOH A 2 177 8 HOH HOH . D 4 HOH A 3 178 9 HOH HOH . D 4 HOH A 4 179 10 HOH HOH . D 4 HOH A 5 180 11 HOH HOH . D 4 HOH A 6 181 14 HOH HOH . D 4 HOH A 7 182 16 HOH HOH . D 4 HOH A 8 183 17 HOH HOH . D 4 HOH A 9 184 18 HOH HOH . D 4 HOH A 10 185 19 HOH HOH . D 4 HOH A 11 186 20 HOH HOH . D 4 HOH A 12 187 22 HOH HOH . D 4 HOH A 13 188 24 HOH HOH . D 4 HOH A 14 189 26 HOH HOH . D 4 HOH A 15 190 27 HOH HOH . D 4 HOH A 16 191 28 HOH HOH . D 4 HOH A 17 192 29 HOH HOH . D 4 HOH A 18 193 30 HOH HOH . D 4 HOH A 19 194 31 HOH HOH . D 4 HOH A 20 195 32 HOH HOH . D 4 HOH A 21 196 34 HOH HOH . D 4 HOH A 22 197 35 HOH HOH . D 4 HOH A 23 198 36 HOH HOH . D 4 HOH A 24 199 37 HOH HOH . D 4 HOH A 25 200 38 HOH HOH . D 4 HOH A 26 201 39 HOH HOH . D 4 HOH A 27 202 40 HOH HOH . D 4 HOH A 28 203 45 HOH HOH . E 4 HOH B 1 1 1 HOH HOH . E 4 HOH B 2 3 3 HOH HOH . E 4 HOH B 3 4 4 HOH HOH . E 4 HOH B 4 5 5 HOH HOH . E 4 HOH B 5 6 6 HOH HOH . E 4 HOH B 6 7 7 HOH HOH . E 4 HOH B 7 12 12 HOH HOH . E 4 HOH B 8 13 13 HOH HOH . E 4 HOH B 9 15 15 HOH HOH . E 4 HOH B 10 21 21 HOH HOH . E 4 HOH B 11 23 23 HOH HOH . E 4 HOH B 12 25 25 HOH HOH . E 4 HOH B 13 33 33 HOH HOH . E 4 HOH B 14 41 41 HOH HOH . E 4 HOH B 15 42 42 HOH HOH . E 4 HOH B 16 43 43 HOH HOH . E 4 HOH B 17 44 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 MSI . . . C 3 37.832 31.958 27.609 1 54.12 ? S1 MSI 1 A 1 HETATM 2 N N1 MSI . . . C 3 34.899 36.018 31.049 1 48.47 ? N1 MSI 1 A 1 HETATM 3 N N2 MSI . . . C 3 39.573 32.069 27.847 1 52.94 ? N2 MSI 1 A 1 HETATM 4 O O1 MSI . . . C 3 41.05 32.581 25.002 1 58.3 ? O1 MSI 1 A 1 HETATM 5 O O2 MSI . . . C 3 33.615 35.333 32.895 1 51.11 ? O2 MSI 1 A 1 HETATM 6 O O3 MSI . . . C 3 34.141 32.711 31.675 1 44.57 ? O3 MSI 1 A 1 HETATM 7 O O4 MSI . . . C 3 37.453 30.645 28.04 1 53.11 ? O4 MSI 1 A 1 HETATM 8 O O5 MSI . . . C 3 37.759 32.316 26.243 1 53.43 ? O5 MSI 1 A 1 HETATM 9 C C2 MSI . . . C 3 34.447 35.109 32.008 1 48.22 ? C2 MSI 1 A 1 HETATM 10 C C3 MSI . . . C 3 35.112 33.759 31.846 1 45.49 ? C3 MSI 1 A 1 HETATM 11 C C4 MSI . . . C 3 36.5 32.931 29.906 1 48.73 ? C4 MSI 1 A 1 HETATM 12 C C5 MSI . . . C 3 36.97 33.228 28.581 1 50.48 ? C5 MSI 1 A 1 HETATM 13 C C6 MSI . . . C 3 36.777 34.539 28.023 1 49.15 ? C6 MSI 1 A 1 HETATM 14 C C7 MSI . . . C 3 36.12 35.562 28.763 1 48.79 ? C7 MSI 1 A 1 HETATM 15 C C8 MSI . . . C 3 35.639 35.246 30.063 1 48.19 ? C8 MSI 1 A 1 HETATM 16 C C9 MSI . . . C 3 35.811 33.971 30.606 1 47.7 ? C9 MSI 1 A 1 HETATM 17 C C20 MSI . . . C 3 40.258 33.341 27.486 1 53.08 ? C20 MSI 1 A 1 HETATM 18 C C10 MSI . . . C 3 40.965 33.931 28.703 1 52.41 ? C10 MSI 1 A 1 HETATM 19 C C11 MSI . . . C 3 40.635 32.993 29.842 1 51.89 ? C11 MSI 1 A 1 HETATM 20 C C12 MSI . . . C 3 40.061 31.748 29.193 1 53.29 ? C12 MSI 1 A 1 HETATM 21 C C13 MSI . . . C 3 41.291 33.239 26.293 1 55.6 ? C13 MSI 1 A 1 HETATM 22 C C14 MSI . . . C 3 39.893 32.891 24.233 1 59.01 ? C14 MSI 1 A 1 HETATM 23 C C15 MSI . . . C 3 39.547 34.247 23.909 1 60.37 ? C15 MSI 1 A 1 HETATM 24 C C16 MSI . . . C 3 38.407 34.544 23.1 1 59.19 ? C16 MSI 1 A 1 HETATM 25 C C17 MSI . . . C 3 37.605 33.488 22.607 1 59.97 ? C17 MSI 1 A 1 HETATM 26 C C18 MSI . . . C 3 37.94 32.128 22.919 1 60.43 ? C18 MSI 1 A 1 HETATM 27 C C19 MSI . . . C 3 39.077 31.833 23.728 1 59.36 ? C19 MSI 1 A 1 HETATM 28 C C1 MSI . . . C 3 34.732 37.47 31.083 1 49.04 ? C1 MSI 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 46 _model_server_stats.element_count 28 #