data_1GG5 # _model_server_result.job_id rtlP9jWC4J7RNqwSsAbG0A _model_server_result.datetime_utc '2025-01-18 10:10:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gg5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 1GG5 # _exptl.entry_id 1GG5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 76.42 _cell.angle_beta 77.22 _cell.angle_gamma 86.45 _cell.entry_id 1GG5 _cell.length_a 56.733 _cell.length_b 55.454 _cell.length_c 97.205 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GG5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,I,J,M,O 1 1 B,D,G,H,K,L,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 124 n n PA O2A FAD sing 125 n n PA O5B FAD sing 126 n n PA O3P FAD sing 127 n n O2A HOA2 FAD sing 128 n n O5B C5B FAD sing 129 n n C5B C4B FAD sing 130 n n C5B H51A FAD sing 131 n n C5B H52A FAD sing 132 n n C4B O4B FAD sing 133 n n C4B C3B FAD sing 134 n n C4B H4B FAD sing 135 n n O4B C1B FAD sing 136 n n C3B O3B FAD sing 137 n n C3B C2B FAD sing 138 n n C3B H3B FAD sing 139 n n O3B HO3A FAD sing 140 n n C2B O2B FAD sing 141 n n C2B C1B FAD sing 142 n n C2B H2B FAD sing 143 n n O2B HO2A FAD sing 144 n n C1B N9A FAD sing 145 n n C1B H1B FAD sing 146 n n N9A C8A FAD sing 147 n y N9A C4A FAD sing 148 n y C8A N7A FAD doub 149 n y C8A H8A FAD sing 150 n n N7A C5A FAD sing 151 n y C5A C6A FAD sing 152 n y C5A C4A FAD doub 153 n y C6A N6A FAD sing 154 n n C6A N1A FAD doub 155 n y N6A H61A FAD sing 156 n n N6A H62A FAD sing 157 n n N1A C2A FAD sing 158 n y C2A N3A FAD doub 159 n y C2A H2A FAD sing 160 n n N3A C4A FAD sing 161 n y N1 C2 FAD sing 162 n n N1 C10 FAD doub 163 n n C2 O2 FAD doub 164 n n C2 N3 FAD sing 165 n n N3 C4 FAD sing 166 n n N3 HN3 FAD sing 167 n n C4 O4 FAD doub 168 n n C4 C4X FAD sing 169 n n C4X N5 FAD doub 170 n n C4X C10 FAD sing 171 n n N5 C5X FAD sing 172 n n C5X C6 FAD doub 173 n y C5X C9A FAD sing 174 n y C6 C7 FAD sing 175 n y C6 H6 FAD sing 176 n n C7 C7M FAD sing 177 n n C7 C8 FAD doub 178 n y C7M HM71 FAD sing 179 n n C7M HM72 FAD sing 180 n n C7M HM73 FAD sing 181 n n C8 C8M FAD sing 182 n n C8 C9 FAD sing 183 n y C8M HM81 FAD sing 184 n n C8M HM82 FAD sing 185 n n C8M HM83 FAD sing 186 n n C9 C9A FAD doub 187 n y C9 H9 FAD sing 188 n n C9A N10 FAD sing 189 n n N10 C10 FAD sing 190 n n N10 C1' FAD sing 191 n n C1' C2' FAD sing 192 n n C1' "H1'1" FAD sing 193 n n C1' "H1'2" FAD sing 194 n n C2' O2' FAD sing 195 n n C2' C3' FAD sing 196 n n C2' H2' FAD sing 197 n n O2' HO2' FAD sing 198 n n C3' O3' FAD sing 199 n n C3' C4' FAD sing 200 n n C3' H3' FAD sing 201 n n O3' HO3' FAD sing 202 n n C4' O4' FAD sing 203 n n C4' C5' FAD sing 204 n n C4' H4' FAD sing 205 n n O4' HO4' FAD sing 206 n n C5' O5' FAD sing 207 n n C5' "H5'1" FAD sing 208 n n C5' "H5'2" FAD sing 209 n n O5' P FAD sing 210 n n P O1P FAD doub 211 n n P O2P FAD sing 212 n n P O3P FAD sing 213 n n O2P HOP2 FAD sing 214 n n # _atom_sites.entry_id 1GG5 _atom_sites.fract_transf_matrix[1][1] 0.017626 _atom_sites.fract_transf_matrix[1][2] -0.001093 _atom_sites.fract_transf_matrix[1][3] -0.00385 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018068 _atom_sites.fract_transf_matrix[2][3] -0.004214 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010832 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 601 601 FAD FAD . F 3 E09 A 1 703 3 E09 E09 . G 2 FAD B 1 602 602 FAD FAD . H 3 E09 B 1 704 4 E09 E09 . I 2 FAD C 1 603 603 FAD FAD . J 3 E09 C 1 701 1 E09 E09 . K 2 FAD D 1 604 604 FAD FAD . L 3 E09 D 1 702 2 E09 E09 . M 4 HOH A 1 704 9 HOH HOH . M 4 HOH A 2 705 15 HOH HOH . M 4 HOH A 3 706 16 HOH HOH . M 4 HOH A 4 707 19 HOH HOH . M 4 HOH A 5 708 21 HOH HOH . M 4 HOH A 6 709 27 HOH HOH . M 4 HOH A 7 710 41 HOH HOH . M 4 HOH A 8 711 43 HOH HOH . M 4 HOH A 9 712 47 HOH HOH . M 4 HOH A 10 713 53 HOH HOH . M 4 HOH A 11 714 54 HOH HOH . M 4 HOH A 12 715 60 HOH HOH . M 4 HOH A 13 716 63 HOH HOH . M 4 HOH A 14 717 64 HOH HOH . M 4 HOH A 15 718 67 HOH HOH . M 4 HOH A 16 719 69 HOH HOH . M 4 HOH A 17 720 70 HOH HOH . M 4 HOH A 18 721 72 HOH HOH . M 4 HOH A 19 722 77 HOH HOH . M 4 HOH A 20 723 79 HOH HOH . M 4 HOH A 21 724 80 HOH HOH . M 4 HOH A 22 725 83 HOH HOH . M 4 HOH A 23 726 86 HOH HOH . M 4 HOH A 24 727 88 HOH HOH . M 4 HOH A 25 728 89 HOH HOH . M 4 HOH A 26 729 93 HOH HOH . M 4 HOH A 27 730 103 HOH HOH . N 4 HOH B 1 705 2 HOH HOH . N 4 HOH B 2 706 3 HOH HOH . N 4 HOH B 3 707 4 HOH HOH . N 4 HOH B 4 708 17 HOH HOH . N 4 HOH B 5 709 18 HOH HOH . N 4 HOH B 6 710 23 HOH HOH . N 4 HOH B 7 711 25 HOH HOH . N 4 HOH B 8 712 34 HOH HOH . N 4 HOH B 9 713 45 HOH HOH . N 4 HOH B 10 714 46 HOH HOH . N 4 HOH B 11 715 49 HOH HOH . N 4 HOH B 12 716 50 HOH HOH . N 4 HOH B 13 717 51 HOH HOH . N 4 HOH B 14 718 52 HOH HOH . N 4 HOH B 15 719 57 HOH HOH . N 4 HOH B 16 720 61 HOH HOH . N 4 HOH B 17 721 62 HOH HOH . N 4 HOH B 18 722 71 HOH HOH . N 4 HOH B 19 723 74 HOH HOH . N 4 HOH B 20 724 90 HOH HOH . N 4 HOH B 21 725 91 HOH HOH . N 4 HOH B 22 726 96 HOH HOH . N 4 HOH B 23 727 99 HOH HOH . O 4 HOH C 1 702 1 HOH HOH . O 4 HOH C 2 703 5 HOH HOH . O 4 HOH C 3 704 6 HOH HOH . O 4 HOH C 4 705 10 HOH HOH . O 4 HOH C 5 706 13 HOH HOH . O 4 HOH C 6 707 14 HOH HOH . O 4 HOH C 7 708 20 HOH HOH . O 4 HOH C 8 709 22 HOH HOH . O 4 HOH C 9 710 24 HOH HOH . O 4 HOH C 10 711 26 HOH HOH . O 4 HOH C 11 712 28 HOH HOH . O 4 HOH C 12 713 31 HOH HOH . O 4 HOH C 13 714 33 HOH HOH . O 4 HOH C 14 715 35 HOH HOH . O 4 HOH C 15 716 38 HOH HOH . O 4 HOH C 16 717 39 HOH HOH . O 4 HOH C 17 718 55 HOH HOH . O 4 HOH C 18 719 56 HOH HOH . O 4 HOH C 19 720 58 HOH HOH . O 4 HOH C 20 721 59 HOH HOH . O 4 HOH C 21 722 65 HOH HOH . O 4 HOH C 22 723 68 HOH HOH . O 4 HOH C 23 724 82 HOH HOH . O 4 HOH C 24 725 85 HOH HOH . O 4 HOH C 25 726 92 HOH HOH . O 4 HOH C 26 727 95 HOH HOH . O 4 HOH C 27 728 97 HOH HOH . O 4 HOH C 28 729 101 HOH HOH . P 4 HOH D 1 703 7 HOH HOH . P 4 HOH D 2 704 8 HOH HOH . P 4 HOH D 3 705 11 HOH HOH . P 4 HOH D 4 706 12 HOH HOH . P 4 HOH D 5 707 29 HOH HOH . P 4 HOH D 6 708 30 HOH HOH . P 4 HOH D 7 709 32 HOH HOH . P 4 HOH D 8 710 36 HOH HOH . P 4 HOH D 9 711 37 HOH HOH . P 4 HOH D 10 712 40 HOH HOH . P 4 HOH D 11 713 42 HOH HOH . P 4 HOH D 12 714 44 HOH HOH . P 4 HOH D 13 715 48 HOH HOH . P 4 HOH D 14 716 66 HOH HOH . P 4 HOH D 15 717 73 HOH HOH . P 4 HOH D 16 718 75 HOH HOH . P 4 HOH D 17 719 76 HOH HOH . P 4 HOH D 18 720 78 HOH HOH . P 4 HOH D 19 721 81 HOH HOH . P 4 HOH D 20 722 84 HOH HOH . P 4 HOH D 21 723 87 HOH HOH . P 4 HOH D 22 724 94 HOH HOH . P 4 HOH D 23 725 98 HOH HOH . P 4 HOH D 24 726 100 HOH HOH . P 4 HOH D 25 727 102 HOH HOH . P 4 HOH D 26 728 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . E 2 10.401 -18.612 5.751 1 33.16 ? PA FAD 601 A 1 HETATM 2 O O1A FAD . . . E 2 10.325 -19.53 4.566 1 36.79 ? O1A FAD 601 A 1 HETATM 3 O O2A FAD . . . E 2 10.451 -19.18 6.989 1 35.61 ? O2A FAD 601 A 1 HETATM 4 O O5B FAD . . . E 2 11.774 -18.131 5.506 1 31.11 ? O5B FAD 601 A 1 HETATM 5 C C5B FAD . . . E 2 12.515 -17.197 6.277 1 32.04 ? C5B FAD 601 A 1 HETATM 6 C C4B FAD . . . E 2 13.97 -17.819 6.278 1 30.07 ? C4B FAD 601 A 1 HETATM 7 O O4B FAD . . . E 2 14.8 -16.927 7.12 1 29.16 ? O4B FAD 601 A 1 HETATM 8 C C3B FAD . . . E 2 14.116 -19.253 6.911 1 30.41 ? C3B FAD 601 A 1 HETATM 9 O O3B FAD . . . E 2 15.107 -20.078 6.338 1 26.82 ? O3B FAD 601 A 1 HETATM 10 C C2B FAD . . . E 2 14.3 -18.908 8.41 1 28.96 ? C2B FAD 601 A 1 HETATM 11 O O2B FAD . . . E 2 14.888 -19.956 9.149 1 30.45 ? O2B FAD 601 A 1 HETATM 12 C C1B FAD . . . E 2 15.159 -17.663 8.338 1 27.92 ? C1B FAD 601 A 1 HETATM 13 N N9A FAD . . . E 2 14.981 -16.661 9.373 1 24.78 ? N9A FAD 601 A 1 HETATM 14 C C8A FAD . . . E 2 13.865 -16.409 10.128 1 23.63 ? C8A FAD 601 A 1 HETATM 15 N N7A FAD . . . E 2 14.048 -15.417 11 1 25.27 ? N7A FAD 601 A 1 HETATM 16 C C5A FAD . . . E 2 15.345 -15.012 10.796 1 25.37 ? C5A FAD 601 A 1 HETATM 17 C C6A FAD . . . E 2 16.179 -13.964 11.433 1 25.88 ? C6A FAD 601 A 1 HETATM 18 N N6A FAD . . . E 2 15.758 -13.185 12.393 1 26.42 ? N6A FAD 601 A 1 HETATM 19 N N1A FAD . . . E 2 17.474 -13.856 10.934 1 26.2 ? N1A FAD 601 A 1 HETATM 20 C C2A FAD . . . E 2 17.952 -14.663 9.923 1 24.68 ? C2A FAD 601 A 1 HETATM 21 N N3A FAD . . . E 2 17.261 -15.643 9.296 1 22.87 ? N3A FAD 601 A 1 HETATM 22 C C4A FAD . . . E 2 15.965 -15.777 9.768 1 24.03 ? C4A FAD 601 A 1 HETATM 23 N N1 FAD . . . E 2 6.453 -16.552 -4.056 1 15.8 ? N1 FAD 601 A 1 HETATM 24 C C2 FAD . . . E 2 6.564 -15.869 -5.196 1 14.31 ? C2 FAD 601 A 1 HETATM 25 O O2 FAD . . . E 2 7.612 -15.467 -5.588 1 12 ? O2 FAD 601 A 1 HETATM 26 N N3 FAD . . . E 2 5.421 -15.545 -5.992 1 14.4 ? N3 FAD 601 A 1 HETATM 27 C C4 FAD . . . E 2 4.135 -15.975 -5.637 1 16.05 ? C4 FAD 601 A 1 HETATM 28 O O4 FAD . . . E 2 3.186 -15.673 -6.343 1 18.28 ? O4 FAD 601 A 1 HETATM 29 C C4X FAD . . . E 2 4.006 -16.781 -4.411 1 14.17 ? C4X FAD 601 A 1 HETATM 30 N N5 FAD . . . E 2 2.768 -17.238 -4.005 1 13.3 ? N5 FAD 601 A 1 HETATM 31 C C5X FAD . . . E 2 2.684 -17.93 -2.809 1 12.39 ? C5X FAD 601 A 1 HETATM 32 C C6 FAD . . . E 2 1.384 -18.394 -2.381 1 12.12 ? C6 FAD 601 A 1 HETATM 33 C C7 FAD . . . E 2 1.215 -19.087 -1.166 1 11.83 ? C7 FAD 601 A 1 HETATM 34 C C7M FAD . . . E 2 -0.159 -19.564 -0.734 1 12.45 ? C7M FAD 601 A 1 HETATM 35 C C8 FAD . . . E 2 2.368 -19.348 -0.31 1 12.53 ? C8 FAD 601 A 1 HETATM 36 C C8M FAD . . . E 2 2.237 -20.078 1 1 14.16 ? C8M FAD 601 A 1 HETATM 37 C C9 FAD . . . E 2 3.657 -18.908 -0.715 1 12.13 ? C9 FAD 601 A 1 HETATM 38 C C9A FAD . . . E 2 3.834 -18.202 -1.961 1 13.99 ? C9A FAD 601 A 1 HETATM 39 N N10 FAD . . . E 2 5.147 -17.701 -2.456 1 14.11 ? N10 FAD 601 A 1 HETATM 40 C C10 FAD . . . E 2 5.239 -17.018 -3.622 1 13.8 ? C10 FAD 601 A 1 HETATM 41 C C1' FAD . . . E 2 6.358 -17.972 -1.621 1 13.38 ? C1' FAD 601 A 1 HETATM 42 C C2' FAD . . . E 2 6.507 -16.978 -0.443 1 18.07 ? C2' FAD 601 A 1 HETATM 43 O O2' FAD . . . E 2 6.632 -15.661 -0.961 1 17.31 ? O2' FAD 601 A 1 HETATM 44 C C3' FAD . . . E 2 7.729 -17.404 0.354 1 17.4 ? C3' FAD 601 A 1 HETATM 45 O O3' FAD . . . E 2 7.491 -18.732 0.809 1 22.53 ? O3' FAD 601 A 1 HETATM 46 C C4' FAD . . . E 2 7.948 -16.47 1.565 1 18.19 ? C4' FAD 601 A 1 HETATM 47 O O4' FAD . . . E 2 8.178 -15.146 1.109 1 16.46 ? O4' FAD 601 A 1 HETATM 48 C C5' FAD . . . E 2 9.136 -16.987 2.363 1 20.47 ? C5' FAD 601 A 1 HETATM 49 O O5' FAD . . . E 2 9.434 -16.053 3.589 1 24.09 ? O5' FAD 601 A 1 HETATM 50 P P FAD . . . E 2 8.851 -16.208 5.001 1 25.63 ? P FAD 601 A 1 HETATM 51 O O1P FAD . . . E 2 9.419 -15.05 5.818 1 26.66 ? O1P FAD 601 A 1 HETATM 52 O O2P FAD . . . E 2 7.478 -16.337 4.958 1 26.45 ? O2P FAD 601 A 1 HETATM 53 O O3P FAD . . . E 2 9.236 -17.445 5.68 1 30.87 ? O3P FAD 601 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #