data_1GG5
#
_model_server_result.job_id            J5oJ_PeXO0713Ajg47SvvQ 
_model_server_result.datetime_utc      '2025-01-18 10:19:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1gg5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":701}' 
#
_entry.id    1GG5 
#
_exptl.entry_id    1GG5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              290.314 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-HYDROXYMETHYL-5-AZIRIDINYL-1METHYL-2-[1H-INDOLE-4,7-DIONE]-PROPANOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         76.42 
_cell.angle_beta          77.22 
_cell.angle_gamma         86.45 
_cell.entry_id            1GG5 
_cell.length_a            56.733 
_cell.length_b            55.454 
_cell.length_c            97.205 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1GG5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,I,J,M,O 1 1 
B,D,G,H,K,L,N,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
_chem_comp.formula           'C15 H18 N2 O4' 
_chem_comp.formula_weight    290.314 
_chem_comp.id                E09 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-HYDROXYMETHYL-5-AZIRIDINYL-1METHYL-2-[1H-INDOLE-4,7-DIONE]-PROPANOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 E09 sing 83 n n 
C1 C5 E09 doub 84 n n 
C1 N1 E09 sing 85 n n 
C2 C3 E09 sing 86 n n 
C2 O8 E09 doub 87 n n 
C3 C4 E09 doub 88 n y 
C3 C17 E09 sing 89 n y 
C4 C6 E09 sing 90 n n 
C4 N19 E09 sing 91 n y 
C5 C6 E09 sing 92 n n 
C5 H51 E09 sing 93 n n 
C6 O9 E09 doub 94 n n 
N1 C11 E09 sing 95 n n 
N1 C12 E09 sing 96 n n 
C11 C12 E09 sing 97 n n 
C11 H111 E09 sing 98 n n 
C11 H112 E09 sing 99 n n 
C12 H121 E09 sing 100 n n 
C12 H122 E09 sing 101 n n 
C17 C18 E09 doub 102 n y 
C17 C20 E09 sing 103 n n 
C18 N19 E09 sing 104 n y 
C18 C25 E09 sing 105 n n 
N19 C31 E09 sing 106 n n 
C20 O21 E09 sing 107 n n 
C20 H201 E09 sing 108 n n 
C20 H202 E09 sing 109 n n 
O21 H21 E09 sing 110 n n 
C25 C26 E09 sing 111 n n 
C25 H251 E09 sing 112 n n 
C25 H252 E09 sing 113 n n 
C26 C7 E09 sing 114 n n 
C26 H261 E09 sing 115 n n 
C26 H262 E09 sing 116 n n 
C7 O1 E09 sing 117 n n 
C7 H71 E09 sing 118 n n 
C7 H72 E09 sing 119 n n 
C31 H311 E09 sing 120 n n 
C31 H312 E09 sing 121 n n 
C31 H313 E09 sing 122 n n 
O1 HO1 E09 sing 123 n n 
#
_atom_sites.entry_id                     1GG5 
_atom_sites.fract_transf_matrix[1][1]    0.017626 
_atom_sites.fract_transf_matrix[1][2]    -0.001093 
_atom_sites.fract_transf_matrix[1][3]    -0.00385 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018068 
_atom_sites.fract_transf_matrix[2][3]    -0.004214 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010832 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 601 601 FAD FAD . 
F 3 E09 A 1 703 3 E09 E09 . 
G 2 FAD B 1 602 602 FAD FAD . 
H 3 E09 B 1 704 4 E09 E09 . 
I 2 FAD C 1 603 603 FAD FAD . 
J 3 E09 C 1 701 1 E09 E09 . 
K 2 FAD D 1 604 604 FAD FAD . 
L 3 E09 D 1 702 2 E09 E09 . 
M 4 HOH A 1 704 9 HOH HOH . 
M 4 HOH A 2 705 15 HOH HOH . 
M 4 HOH A 3 706 16 HOH HOH . 
M 4 HOH A 4 707 19 HOH HOH . 
M 4 HOH A 5 708 21 HOH HOH . 
M 4 HOH A 6 709 27 HOH HOH . 
M 4 HOH A 7 710 41 HOH HOH . 
M 4 HOH A 8 711 43 HOH HOH . 
M 4 HOH A 9 712 47 HOH HOH . 
M 4 HOH A 10 713 53 HOH HOH . 
M 4 HOH A 11 714 54 HOH HOH . 
M 4 HOH A 12 715 60 HOH HOH . 
M 4 HOH A 13 716 63 HOH HOH . 
M 4 HOH A 14 717 64 HOH HOH . 
M 4 HOH A 15 718 67 HOH HOH . 
M 4 HOH A 16 719 69 HOH HOH . 
M 4 HOH A 17 720 70 HOH HOH . 
M 4 HOH A 18 721 72 HOH HOH . 
M 4 HOH A 19 722 77 HOH HOH . 
M 4 HOH A 20 723 79 HOH HOH . 
M 4 HOH A 21 724 80 HOH HOH . 
M 4 HOH A 22 725 83 HOH HOH . 
M 4 HOH A 23 726 86 HOH HOH . 
M 4 HOH A 24 727 88 HOH HOH . 
M 4 HOH A 25 728 89 HOH HOH . 
M 4 HOH A 26 729 93 HOH HOH . 
M 4 HOH A 27 730 103 HOH HOH . 
N 4 HOH B 1 705 2 HOH HOH . 
N 4 HOH B 2 706 3 HOH HOH . 
N 4 HOH B 3 707 4 HOH HOH . 
N 4 HOH B 4 708 17 HOH HOH . 
N 4 HOH B 5 709 18 HOH HOH . 
N 4 HOH B 6 710 23 HOH HOH . 
N 4 HOH B 7 711 25 HOH HOH . 
N 4 HOH B 8 712 34 HOH HOH . 
N 4 HOH B 9 713 45 HOH HOH . 
N 4 HOH B 10 714 46 HOH HOH . 
N 4 HOH B 11 715 49 HOH HOH . 
N 4 HOH B 12 716 50 HOH HOH . 
N 4 HOH B 13 717 51 HOH HOH . 
N 4 HOH B 14 718 52 HOH HOH . 
N 4 HOH B 15 719 57 HOH HOH . 
N 4 HOH B 16 720 61 HOH HOH . 
N 4 HOH B 17 721 62 HOH HOH . 
N 4 HOH B 18 722 71 HOH HOH . 
N 4 HOH B 19 723 74 HOH HOH . 
N 4 HOH B 20 724 90 HOH HOH . 
N 4 HOH B 21 725 91 HOH HOH . 
N 4 HOH B 22 726 96 HOH HOH . 
N 4 HOH B 23 727 99 HOH HOH . 
O 4 HOH C 1 702 1 HOH HOH . 
O 4 HOH C 2 703 5 HOH HOH . 
O 4 HOH C 3 704 6 HOH HOH . 
O 4 HOH C 4 705 10 HOH HOH . 
O 4 HOH C 5 706 13 HOH HOH . 
O 4 HOH C 6 707 14 HOH HOH . 
O 4 HOH C 7 708 20 HOH HOH . 
O 4 HOH C 8 709 22 HOH HOH . 
O 4 HOH C 9 710 24 HOH HOH . 
O 4 HOH C 10 711 26 HOH HOH . 
O 4 HOH C 11 712 28 HOH HOH . 
O 4 HOH C 12 713 31 HOH HOH . 
O 4 HOH C 13 714 33 HOH HOH . 
O 4 HOH C 14 715 35 HOH HOH . 
O 4 HOH C 15 716 38 HOH HOH . 
O 4 HOH C 16 717 39 HOH HOH . 
O 4 HOH C 17 718 55 HOH HOH . 
O 4 HOH C 18 719 56 HOH HOH . 
O 4 HOH C 19 720 58 HOH HOH . 
O 4 HOH C 20 721 59 HOH HOH . 
O 4 HOH C 21 722 65 HOH HOH . 
O 4 HOH C 22 723 68 HOH HOH . 
O 4 HOH C 23 724 82 HOH HOH . 
O 4 HOH C 24 725 85 HOH HOH . 
O 4 HOH C 25 726 92 HOH HOH . 
O 4 HOH C 26 727 95 HOH HOH . 
O 4 HOH C 27 728 97 HOH HOH . 
O 4 HOH C 28 729 101 HOH HOH . 
P 4 HOH D 1 703 7 HOH HOH . 
P 4 HOH D 2 704 8 HOH HOH . 
P 4 HOH D 3 705 11 HOH HOH . 
P 4 HOH D 4 706 12 HOH HOH . 
P 4 HOH D 5 707 29 HOH HOH . 
P 4 HOH D 6 708 30 HOH HOH . 
P 4 HOH D 7 709 32 HOH HOH . 
P 4 HOH D 8 710 36 HOH HOH . 
P 4 HOH D 9 711 37 HOH HOH . 
P 4 HOH D 10 712 40 HOH HOH . 
P 4 HOH D 11 713 42 HOH HOH . 
P 4 HOH D 12 714 44 HOH HOH . 
P 4 HOH D 13 715 48 HOH HOH . 
P 4 HOH D 14 716 66 HOH HOH . 
P 4 HOH D 15 717 73 HOH HOH . 
P 4 HOH D 16 718 75 HOH HOH . 
P 4 HOH D 17 719 76 HOH HOH . 
P 4 HOH D 18 720 78 HOH HOH . 
P 4 HOH D 19 721 81 HOH HOH . 
P 4 HOH D 20 722 84 HOH HOH . 
P 4 HOH D 21 723 87 HOH HOH . 
P 4 HOH D 22 724 94 HOH HOH . 
P 4 HOH D 23 725 98 HOH HOH . 
P 4 HOH D 24 726 100 HOH HOH . 
P 4 HOH D 25 727 102 HOH HOH . 
P 4 HOH D 26 728 104 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 E09 . . . J 3 4.221 -19.393 -7.551 1 73.4 ? C1 E09 701 C 1 
HETATM 2 C C2 E09 . . . J 3 5.734 -19.288 -7.236 1 73.34 ? C2 E09 701 C 1 
HETATM 3 C C3 E09 . . . J 3 6.197 -19.838 -5.917 1 73.71 ? C3 E09 701 C 1 
HETATM 4 C C4 E09 . . . J 3 5.247 -20.441 -4.985 1 73.68 ? C4 E09 701 C 1 
HETATM 5 C C5 E09 . . . J 3 3.369 -19.971 -6.637 1 72.58 ? C5 E09 701 C 1 
HETATM 6 C C6 E09 . . . J 3 3.791 -20.527 -5.317 1 73.56 ? C6 E09 701 C 1 
HETATM 7 O O8 E09 . . . J 3 6.54 -18.782 -8.021 1 72.74 ? O8 E09 701 C 1 
HETATM 8 O O9 E09 . . . J 3 2.951 -21.023 -4.571 1 73.97 ? O9 E09 701 C 1 
HETATM 9 N N1 E09 . . . J 3 3.634 -18.891 -8.844 1 74.37 ? N1 E09 701 C 1 
HETATM 10 C C11 E09 . . . J 3 3.992 -17.534 -9.362 1 74 ? C11 E09 701 C 1 
HETATM 11 C C12 E09 . . . J 3 2.728 -17.706 -8.67 1 73.8 ? C12 E09 701 C 1 
HETATM 12 C C17 E09 . . . J 3 7.541 -19.91 -5.292 1 73.69 ? C17 E09 701 C 1 
HETATM 13 C C18 E09 . . . J 3 7.44 -20.507 -4.066 1 73.85 ? C18 E09 701 C 1 
HETATM 14 N N19 E09 . . . J 3 6.025 -20.865 -3.82 1 73.19 ? N19 E09 701 C 1 
HETATM 15 C C20 E09 . . . J 3 8.816 -19.391 -5.937 1 74 ? C20 E09 701 C 1 
HETATM 16 O O21 E09 . . . J 3 9.083 -20.034 -7.188 1 74.53 ? O21 E09 701 C 1 
HETATM 17 C C25 E09 . . . J 3 8.521 -20.776 -3.1 1 75.38 ? C25 E09 701 C 1 
HETATM 18 C C26 E09 . . . J 3 9.2 -21.928 -2.978 1 76.97 ? C26 E09 701 C 1 
HETATM 19 C C7 E09 . . . J 3 10.419 -21.995 -2.086 1 78.17 ? C7 E09 701 C 1 
HETATM 20 C C31 E09 . . . J 3 5.477 -21.519 -2.636 1 72.94 ? C31 E09 701 C 1 
HETATM 21 O O1 E09 . . . J 3 11.077 -23.252 -2.221 1 79.7 ? O1 E09 701 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           21 
#