data_1GHG
#
_model_server_result.job_id            LMPOI9bVMaxPplMBbTvpuA 
_model_server_result.datetime_utc      '2024-12-26 19:28:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ghg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":11}' 
#
_entry.id    1GHG 
#
_exptl.entry_id    1GHG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              60.052 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1GHG 
_cell.length_a            29.48 
_cell.length_b            29.48 
_cell.length_c            74.27 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1GHG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,K,L 1 1 
C,D,G,H,I,J,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MLU 1 A MLU 1 1_555 A N OMZ 2 A OMZ 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale2 A C OMZ 2 A OMZ 2 1_555 A N ASN 3 A ASN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.387 ? 
covale ? covale3 A OH OMZ 2 A OMZ 2 1_555 A C5 GHP 4 A GHP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.417 ? 
covale ? covale4 A C ASN 3 A ASN 3 1_555 A N GHP 4 A GHP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? 
covale ? covale5 A C GHP 4 A GHP 4 1_555 A N GHP 5 A GHP 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale6 A C3 GHP 4 A GHP 4 1_555 A OCZ OMY 6 A OMY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? 
covale ? covale7 A C GHP 5 A GHP 5 1_555 A N OMY 6 A OMY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? 
covale ? covale8 A C3 GHP 5 A GHP 5 1_555 A CG1 3FG 7 A 3FG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.521 ? 
covale ? covale9 A C OMY 6 A OMY 6 1_555 A N 3FG 7 A 3FG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? 
covale ? covale10 B C MLU 1 B MLU 1 1_555 B N OMZ 2 B OMZ 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? 
covale ? covale11 B C OMZ 2 B OMZ 2 1_555 B N ASN 3 B ASN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.394 ? 
covale ? covale12 B OH OMZ 2 B OMZ 2 1_555 B C5 GHP 4 B GHP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.411 ? 
covale ? covale13 B C ASN 3 B ASN 3 1_555 B N GHP 4 B GHP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale14 B C GHP 4 B GHP 4 1_555 B N GHP 5 B GHP 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? 
covale ? covale15 B C3 GHP 4 B GHP 4 1_555 B OCZ OMY 6 B OMY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.402 ? 
covale ? covale16 B C GHP 5 B GHP 5 1_555 B N OMY 6 B OMY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale17 B C3 GHP 5 B GHP 5 1_555 B CG1 3FG 7 B 3FG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.49 ? 
covale ? covale18 B C OMY 6 B OMY 6 1_555 B N 3FG 7 B 3FG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale19 C C MLU 1 C MLU 1 1_555 C N OMZ 2 C OMZ 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale20 C C OMZ 2 C OMZ 2 1_555 C N ASN 3 C ASN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? 
covale ? covale21 C OH OMZ 2 C OMZ 2 1_555 C C5 GHP 4 C GHP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.376 ? 
covale ? covale22 C C ASN 3 C ASN 3 1_555 C N GHP 4 C GHP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? 
covale ? covale23 C C GHP 4 C GHP 4 1_555 C N GHP 5 C GHP 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale24 C C3 GHP 4 C GHP 4 1_555 C OCZ OMY 6 C OMY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? 
covale ? covale25 C C GHP 5 C GHP 5 1_555 C N OMY 6 C OMY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale26 C C3 GHP 5 C GHP 5 1_555 C CG1 3FG 7 C 3FG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.485 ? 
covale ? covale27 C C OMY 6 C OMY 6 1_555 C N 3FG 7 C 3FG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? 
covale ? covale28 D C MLU 1 D MLU 1 1_555 D N OMZ 2 D OMZ 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale29 D C OMZ 2 D OMZ 2 1_555 D N ASN 3 D ASN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? 
covale ? covale30 D OH OMZ 2 D OMZ 2 1_555 D C5 GHP 4 D GHP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.406 ? 
covale ? covale31 D C ASN 3 D ASN 3 1_555 D N GHP 4 D GHP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale32 D C GHP 4 D GHP 4 1_555 D N GHP 5 D GHP 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale33 D C3 GHP 4 D GHP 4 1_555 D OCZ OMY 6 D OMY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.42 ? 
covale ? covale34 D C GHP 5 D GHP 5 1_555 D N OMY 6 D OMY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.278 ? 
covale ? covale35 D C3 GHP 5 D GHP 5 1_555 D CG1 3FG 7 D 3FG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.467 ? 
covale ? covale36 D C OMY 6 D OMY 6 1_555 D N 3FG 7 D 3FG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? 
#
_chem_comp.formula           'C2 H4 O2' 
_chem_comp.formula_weight    60.052 
_chem_comp.id                ACY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACY doub 23 n n 
C OXT ACY sing 24 n n 
C CH3 ACY sing 25 n n 
OXT HXT ACY sing 26 n n 
CH3 H1 ACY sing 27 n n 
CH3 H2 ACY sing 28 n n 
CH3 H3 ACY sing 29 n n 
#
_atom_sites.entry_id                     1GHG 
_atom_sites.fract_transf_matrix[1][1]    0.033921 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.033921 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013464 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ACY A 1 11 11 ACY ACY . 
F 2 ACY B 1 11 11 ACY ACY . 
G 2 ACY C 1 11 11 ACY ACY . 
H 3 DMS C 1 12 12 DMS DMS . 
I 2 ACY D 1 11 11 ACY ACY . 
J 3 DMS D 1 12 12 DMS DMS . 
K 4 HOH A 1 2001 2001 HOH HOH . 
K 4 HOH A 2 2002 2002 HOH HOH . 
K 4 HOH A 3 2003 2003 HOH HOH . 
K 4 HOH A 4 2004 2004 HOH HOH . 
K 4 HOH A 5 2005 2005 HOH HOH . 
K 4 HOH A 6 2006 2006 HOH HOH . 
K 4 HOH A 7 2007 2007 HOH HOH . 
K 4 HOH A 8 2008 2008 HOH HOH . 
K 4 HOH A 9 2009 2009 HOH HOH . 
K 4 HOH A 10 2010 2010 HOH HOH . 
K 4 HOH A 11 2011 2011 HOH HOH . 
K 4 HOH A 12 2012 2012 HOH HOH . 
K 4 HOH A 13 2013 2013 HOH HOH . 
K 4 HOH A 14 2014 2014 HOH HOH . 
K 4 HOH A 15 2015 2015 HOH HOH . 
K 4 HOH A 16 2016 2016 HOH HOH . 
K 4 HOH A 17 2017 2017 HOH HOH . 
K 4 HOH A 18 2018 2018 HOH HOH . 
L 4 HOH B 1 2001 2001 HOH HOH . 
L 4 HOH B 2 2002 2002 HOH HOH . 
L 4 HOH B 3 2003 2003 HOH HOH . 
L 4 HOH B 4 2004 2004 HOH HOH . 
L 4 HOH B 5 2005 2005 HOH HOH . 
L 4 HOH B 6 2006 2006 HOH HOH . 
L 4 HOH B 7 2007 2007 HOH HOH . 
L 4 HOH B 8 2008 2008 HOH HOH . 
L 4 HOH B 9 2009 2009 HOH HOH . 
L 4 HOH B 10 2010 2010 HOH HOH . 
L 4 HOH B 11 2011 2011 HOH HOH . 
L 4 HOH B 12 2012 2012 HOH HOH . 
L 4 HOH B 13 2013 2013 HOH HOH . 
L 4 HOH B 14 2014 2014 HOH HOH . 
L 4 HOH B 15 2015 2015 HOH HOH . 
M 4 HOH C 1 2001 2001 HOH HOH . 
M 4 HOH C 2 2002 2002 HOH HOH . 
M 4 HOH C 3 2003 2003 HOH HOH . 
M 4 HOH C 4 2004 2004 HOH HOH . 
M 4 HOH C 5 2005 2005 HOH HOH . 
M 4 HOH C 6 2006 2006 HOH HOH . 
M 4 HOH C 7 2007 2007 HOH HOH . 
M 4 HOH C 8 2008 2008 HOH HOH . 
M 4 HOH C 9 2009 2009 HOH HOH . 
M 4 HOH C 10 2010 2010 HOH HOH . 
M 4 HOH C 11 2011 2011 HOH HOH . 
M 4 HOH C 12 2012 2012 HOH HOH . 
M 4 HOH C 13 2013 2013 HOH HOH . 
M 4 HOH C 14 2014 2014 HOH HOH . 
M 4 HOH C 15 2015 2015 HOH HOH . 
M 4 HOH C 16 2016 2016 HOH HOH . 
M 4 HOH C 17 2017 2017 HOH HOH . 
M 4 HOH C 18 2018 2018 HOH HOH . 
M 4 HOH C 19 2019 2019 HOH HOH . 
N 4 HOH D 1 2001 2001 HOH HOH . 
N 4 HOH D 2 2002 2002 HOH HOH . 
N 4 HOH D 3 2003 2003 HOH HOH . 
N 4 HOH D 4 2004 2004 HOH HOH . 
N 4 HOH D 5 2005 2005 HOH HOH . 
N 4 HOH D 6 2006 2006 HOH HOH . 
N 4 HOH D 7 2007 2007 HOH HOH . 
N 4 HOH D 8 2008 2008 HOH HOH . 
N 4 HOH D 9 2009 2009 HOH HOH . 
N 4 HOH D 10 2010 2010 HOH HOH . 
N 4 HOH D 11 2011 2011 HOH HOH . 
N 4 HOH D 12 2012 2012 HOH HOH . 
N 4 HOH D 13 2013 2013 HOH HOH . 
N 4 HOH D 14 2014 2014 HOH HOH . 
N 4 HOH D 15 2015 2015 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACY . . . I 2 5.482 14.778 15.82 1 11.18 ? C ACY 11 D 1 
HETATM 2 O O ACY . . . I 2 6.484 15.27 16.42 1 10.11 ? O ACY 11 D 1 
HETATM 3 O OXT ACY . . . I 2 5.468 13.65 15.305 1 11.65 ? OXT ACY 11 D 1 
HETATM 4 C CH3 ACY . . . I 2 4.203 15.625 15.77 1 12.17 ? CH3 ACY 11 D 1 
#
_model_server_stats.io_time_ms              42 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#