data_1GLC
#
_model_server_result.job_id            rRHACX1CSgwlDjqrSOP5Mg 
_model_server_result.datetime_utc      '2024-10-24 04:27:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1glc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":503}' 
#
_entry.id    1GLC 
#
_exptl.entry_id    1GLC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              170.058 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCERALDEHYDE-3-PHOSPHATE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1GLC 
_cell.length_a            123.83 
_cell.length_b            125.16 
_cell.length_c            133.54 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1GLC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS octameric 8 author_and_software_defined_assembly 1 
PISA tetrameric 4 software_defined_assembly 2 
PISA tetrameric 4 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H 1 1,2,3,4 
A,B,C,D,E,F,G,H 2 1,3 
B,D,E,F,H 3 1,3 
A,C,G 3 5,6 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 125.16 0 
3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
4 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 125.16 0 
5 'crystal symmetry operation' 6_454 -x-1/2,-y+1/2,z-1/2 -1 0 0 0 -1 0 0 0 1 -61.915 62.58 -66.77 
6 'crystal symmetry operation' 8_555 x+1/2,-y+1/2,-z+1/2 1 0 0 0 -1 0 0 0 -1 61.915 62.58 66.77 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 75 F HIS 75 1_555 C ZN ZN . F ZN 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? 
metalc ? metalc2 A NE2 HIS 90 F HIS 90 1_555 C ZN ZN . F ZN 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? 
metalc ? metalc3 C ZN ZN . F ZN 169 1_555 G O HOH . F HOH 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
metalc ? metalc4 C ZN ZN . F ZN 169 1_555 B OE2 GLU 478 G GLU 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? 
metalc ? metalc5 B OD2 ASP 10 G ASP 10 1_555 D MG MG . G MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.121 ? 
metalc ? metalc6 D MG MG . G MG 502 1_555 E O4P G3H . G G3H 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.815 ? 
metalc ? metalc7 D MG MG . G MG 502 1_555 F O2B ADP . G ADP 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? 
#
_chem_comp.formula           'C3 H7 O6 P' 
_chem_comp.formula_weight    170.058 
_chem_comp.id                G3H 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCERALDEHYDE-3-PHOSPHATE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 G3H doub 127 n n 
C1 C2 G3H sing 128 n n 
C1 H11 G3H sing 129 n n 
C2 O2 G3H sing 130 n n 
C2 C3 G3H sing 131 n n 
C2 H2 G3H sing 132 n n 
O2 HO2 G3H sing 133 n n 
C3 O1P G3H sing 134 n n 
C3 H31 G3H sing 135 n n 
C3 H32 G3H sing 136 n n 
O1P P G3H sing 137 n n 
O2P P G3H doub 138 n n 
O3P P G3H sing 139 n n 
O3P HOP3 G3H sing 140 n n 
O4P P G3H sing 141 n n 
O4P HOP4 G3H sing 142 n n 
#
_atom_sites.entry_id                     1GLC 
_atom_sites.fract_transf_matrix[1][1]    0.008076 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00799 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007488 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN F 1 169 4 ZN ZN . 
D 4 MG G 1 502 3 MG MG . 
E 5 G3H G 1 503 1 G3H G3P . 
F 6 ADP G 1 504 2 ADP ADP . 
G 7 HOH F 1 170 1 HOH HOH . 
G 7 HOH F 2 171 21 HOH HOH . 
G 7 HOH F 3 172 22 HOH HOH . 
G 7 HOH F 4 173 27 HOH HOH . 
G 7 HOH F 5 174 42 HOH HOH . 
H 7 HOH G 1 505 3 HOH HOH . 
H 7 HOH G 2 506 4 HOH HOH . 
H 7 HOH G 3 507 5 HOH HOH . 
H 7 HOH G 4 508 6 HOH HOH . 
H 7 HOH G 5 509 7 HOH HOH . 
H 7 HOH G 6 510 10 HOH HOH . 
H 7 HOH G 7 511 11 HOH HOH . 
H 7 HOH G 8 512 13 HOH HOH . 
H 7 HOH G 9 513 14 HOH HOH . 
H 7 HOH G 10 514 15 HOH HOH . 
H 7 HOH G 11 515 16 HOH HOH . 
H 7 HOH G 12 516 17 HOH HOH . 
H 7 HOH G 13 517 23 HOH HOH . 
H 7 HOH G 14 518 26 HOH HOH . 
H 7 HOH G 15 519 28 HOH HOH . 
H 7 HOH G 16 520 29 HOH HOH . 
H 7 HOH G 17 521 30 HOH HOH . 
H 7 HOH G 18 522 32 HOH HOH . 
H 7 HOH G 19 523 33 HOH HOH . 
H 7 HOH G 20 524 34 HOH HOH . 
H 7 HOH G 21 525 35 HOH HOH . 
H 7 HOH G 22 526 37 HOH HOH . 
H 7 HOH G 23 527 38 HOH HOH . 
H 7 HOH G 24 528 40 HOH HOH . 
H 7 HOH G 25 529 41 HOH HOH . 
H 7 HOH G 26 530 43 HOH HOH . 
H 7 HOH G 27 531 44 HOH HOH . 
H 7 HOH G 28 532 48 HOH HOH . 
H 7 HOH G 29 533 49 HOH HOH . 
H 7 HOH G 30 534 50 HOH HOH . 
H 7 HOH G 31 535 51 HOH HOH . 
H 7 HOH G 32 536 52 HOH HOH . 
H 7 HOH G 33 537 53 HOH HOH . 
H 7 HOH G 34 538 54 HOH HOH . 
H 7 HOH G 35 539 55 HOH HOH . 
H 7 HOH G 36 540 57 HOH HOH . 
H 7 HOH G 37 541 58 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 G3H . . . E 5 23.851 41.167 10.051 1 13.13 ? O1 G3H 503 G 1 
HETATM 2 C C1 G3H . . . E 5 24.04 42.479 9.583 1 9.37 ? C1 G3H 503 G 1 
HETATM 3 C C2 G3H . . . E 5 23.888 43.437 10.733 1 5 ? C2 G3H 503 G 1 
HETATM 4 O O2 G3H . . . E 5 25.185 43.823 11.072 1 31.1 ? O2 G3H 503 G 1 
HETATM 5 C C3 G3H . . . E 5 23.164 44.727 10.244 1 9.6 ? C3 G3H 503 G 1 
HETATM 6 O O1P G3H . . . E 5 23.315 45.812 11.199 1 36.09 ? O1P G3H 503 G 1 
HETATM 7 O O2P G3H . . . E 5 22.816 47.876 9.719 1 23.28 ? O2P G3H 503 G 1 
HETATM 8 O O3P G3H . . . E 5 20.943 46.985 11.184 1 75 ? O3P G3H 503 G 1 
HETATM 9 O O4P G3H . . . E 5 22.855 48.218 12.132 1 75 ? O4P G3H 503 G 1 
HETATM 10 P P G3H . . . E 5 22.447 47.228 11.041 1 75 ? P G3H 503 G 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          20 
_model_server_stats.element_count           10 
#