data_1GM6 # _model_server_result.job_id dMuW1fspQRxkp3wTuSAjdw _model_server_result.datetime_utc '2025-03-06 09:35:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gm6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 1GM6 # _exptl.entry_id 1GM6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GM6 _cell.length_a 70.112 _cell.length_b 70.112 _cell.length_c 71.75 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GM6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 68 A CYS 68 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc1 A OE2 GLU 21 A GLU 21 1_555 B CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1GM6 _atom_sites.fract_transf_matrix[1][1] 0.014263 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014263 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013937 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD A 1 201 1166 CD CD . C 3 GOL A 1 202 1167 GOL GOL . D 4 NAG A 1 203 1168 NAG NAG . E 5 HOH A 1 301 2096 HOH HOH . E 5 HOH A 2 302 2069 HOH HOH . E 5 HOH A 3 303 2110 HOH HOH . E 5 HOH A 4 304 2107 HOH HOH . E 5 HOH A 5 305 2073 HOH HOH . E 5 HOH A 6 306 2064 HOH HOH . E 5 HOH A 7 307 2097 HOH HOH . E 5 HOH A 8 308 2012 HOH HOH . E 5 HOH A 9 309 2055 HOH HOH . E 5 HOH A 10 310 2066 HOH HOH . E 5 HOH A 11 311 2008 HOH HOH . E 5 HOH A 12 312 2079 HOH HOH . E 5 HOH A 13 313 2046 HOH HOH . E 5 HOH A 14 314 2028 HOH HOH . E 5 HOH A 15 315 2067 HOH HOH . E 5 HOH A 16 316 2032 HOH HOH . E 5 HOH A 17 317 2101 HOH HOH . E 5 HOH A 18 318 2005 HOH HOH . E 5 HOH A 19 319 2049 HOH HOH . E 5 HOH A 20 320 2034 HOH HOH . E 5 HOH A 21 321 2013 HOH HOH . E 5 HOH A 22 322 2074 HOH HOH . E 5 HOH A 23 323 2048 HOH HOH . E 5 HOH A 24 324 2033 HOH HOH . E 5 HOH A 25 325 2031 HOH HOH . E 5 HOH A 26 326 2050 HOH HOH . E 5 HOH A 27 327 2105 HOH HOH . E 5 HOH A 28 328 2036 HOH HOH . E 5 HOH A 29 329 2109 HOH HOH . E 5 HOH A 30 330 2071 HOH HOH . E 5 HOH A 31 331 2092 HOH HOH . E 5 HOH A 32 332 2006 HOH HOH . E 5 HOH A 33 333 2111 HOH HOH . E 5 HOH A 34 334 2040 HOH HOH . E 5 HOH A 35 335 2065 HOH HOH . E 5 HOH A 36 336 2021 HOH HOH . E 5 HOH A 37 337 2099 HOH HOH . E 5 HOH A 38 338 2056 HOH HOH . E 5 HOH A 39 339 2038 HOH HOH . E 5 HOH A 40 340 2087 HOH HOH . E 5 HOH A 41 341 2080 HOH HOH . E 5 HOH A 42 342 2103 HOH HOH . E 5 HOH A 43 343 2072 HOH HOH . E 5 HOH A 44 344 2037 HOH HOH . E 5 HOH A 45 345 2086 HOH HOH . E 5 HOH A 46 346 2043 HOH HOH . E 5 HOH A 47 347 2089 HOH HOH . E 5 HOH A 48 348 2078 HOH HOH . E 5 HOH A 49 349 2090 HOH HOH . E 5 HOH A 50 350 2018 HOH HOH . E 5 HOH A 51 351 2068 HOH HOH . E 5 HOH A 52 352 2059 HOH HOH . E 5 HOH A 53 353 2083 HOH HOH . E 5 HOH A 54 354 2060 HOH HOH . E 5 HOH A 55 355 2030 HOH HOH . E 5 HOH A 56 356 2082 HOH HOH . E 5 HOH A 57 357 2042 HOH HOH . E 5 HOH A 58 358 2044 HOH HOH . E 5 HOH A 59 359 2015 HOH HOH . E 5 HOH A 60 360 2093 HOH HOH . E 5 HOH A 61 361 2009 HOH HOH . E 5 HOH A 62 362 2081 HOH HOH . E 5 HOH A 63 363 2104 HOH HOH . E 5 HOH A 64 364 2014 HOH HOH . E 5 HOH A 65 365 2051 HOH HOH . E 5 HOH A 66 366 2094 HOH HOH . E 5 HOH A 67 367 2053 HOH HOH . E 5 HOH A 68 368 2098 HOH HOH . E 5 HOH A 69 369 2058 HOH HOH . E 5 HOH A 70 370 2085 HOH HOH . E 5 HOH A 71 371 2061 HOH HOH . E 5 HOH A 72 372 2088 HOH HOH . E 5 HOH A 73 373 2003 HOH HOH . E 5 HOH A 74 374 2102 HOH HOH . E 5 HOH A 75 375 2057 HOH HOH . E 5 HOH A 76 376 2106 HOH HOH . E 5 HOH A 77 377 2108 HOH HOH . E 5 HOH A 78 378 2027 HOH HOH . E 5 HOH A 79 379 2054 HOH HOH . E 5 HOH A 80 380 2095 HOH HOH . E 5 HOH A 81 381 2011 HOH HOH . E 5 HOH A 82 382 2070 HOH HOH . E 5 HOH A 83 383 2100 HOH HOH . E 5 HOH A 84 384 2039 HOH HOH . E 5 HOH A 85 385 2076 HOH HOH . E 5 HOH A 86 386 2112 HOH HOH . E 5 HOH A 87 387 2075 HOH HOH . E 5 HOH A 88 388 2025 HOH HOH . E 5 HOH A 89 389 2084 HOH HOH . E 5 HOH A 90 390 2026 HOH HOH . E 5 HOH A 91 391 2029 HOH HOH . E 5 HOH A 92 392 2091 HOH HOH . E 5 HOH A 93 393 2062 HOH HOH . E 5 HOH A 94 394 2052 HOH HOH . E 5 HOH A 95 395 2035 HOH HOH . E 5 HOH A 96 396 2041 HOH HOH . E 5 HOH A 97 397 2017 HOH HOH . E 5 HOH A 98 398 2063 HOH HOH . E 5 HOH A 99 399 2047 HOH HOH . E 5 HOH A 100 400 2023 HOH HOH . E 5 HOH A 101 401 2022 HOH HOH . E 5 HOH A 102 402 2007 HOH HOH . E 5 HOH A 103 403 2004 HOH HOH . E 5 HOH A 104 404 2001 HOH HOH . E 5 HOH A 105 405 2024 HOH HOH . E 5 HOH A 106 406 2077 HOH HOH . E 5 HOH A 107 407 2002 HOH HOH . E 5 HOH A 108 408 2010 HOH HOH . E 5 HOH A 109 409 2019 HOH HOH . E 5 HOH A 110 410 2045 HOH HOH . E 5 HOH A 111 411 2016 HOH HOH . E 5 HOH A 112 412 2020 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 15.41 _atom_site.Cartn_y 18.362 _atom_site.Cartn_z 34.688 _atom_site.occupancy 0.55 _atom_site.B_iso_or_equiv 34.82 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #