data_1GNE # _model_server_result.job_id G6xwjMmKbppQPHkRB1z84A _model_server_result.datetime_utc '2024-11-24 00:00:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gne # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":233}' # _entry.id 1GNE # _exptl.entry_id 1GNE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GNE _cell.length_a 94.74 _cell.length_b 94.74 _cell.length_c 58.13 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GNE _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 29.065 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 129 n n N1 HN11 GSH sing 130 n n N1 HN12 GSH sing 131 n n CA1 C1 GSH sing 132 n n CA1 CB1 GSH sing 133 n n CA1 HA1 GSH sing 134 n n C1 O11 GSH doub 135 n n C1 O12 GSH sing 136 n n O12 H12 GSH sing 137 n n CB1 CG1 GSH sing 138 n n CB1 HB12 GSH sing 139 n n CB1 HB13 GSH sing 140 n n CG1 CD1 GSH sing 141 n n CG1 HG12 GSH sing 142 n n CG1 HG13 GSH sing 143 n n CD1 OE1 GSH doub 144 n n CD1 N2 GSH sing 145 n n N2 CA2 GSH sing 146 n n N2 HN2 GSH sing 147 n n CA2 C2 GSH sing 148 n n CA2 CB2 GSH sing 149 n n CA2 HA2 GSH sing 150 n n C2 O2 GSH doub 151 n n C2 N3 GSH sing 152 n n CB2 SG2 GSH sing 153 n n CB2 HB22 GSH sing 154 n n CB2 HB23 GSH sing 155 n n SG2 HSG GSH sing 156 n n N3 CA3 GSH sing 157 n n N3 HN3 GSH sing 158 n n CA3 C3 GSH sing 159 n n CA3 HA31 GSH sing 160 n n CA3 HA32 GSH sing 161 n n C3 O31 GSH doub 162 n n C3 O32 GSH sing 163 n n O32 H32 GSH sing 164 n n # _atom_sites.entry_id 1GNE _atom_sites.fract_transf_matrix[1][1] 0.010555 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010555 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017203 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GSH A 1 233 233 GSH GSH . C 3 HOH A 1 234 234 HOH HOH . C 3 HOH A 2 235 235 HOH HOH . C 3 HOH A 3 236 236 HOH HOH . C 3 HOH A 4 237 237 HOH HOH . C 3 HOH A 5 238 238 HOH HOH . C 3 HOH A 6 239 239 HOH HOH . C 3 HOH A 7 240 240 HOH HOH . C 3 HOH A 8 241 241 HOH HOH . C 3 HOH A 9 242 242 HOH HOH . C 3 HOH A 10 243 243 HOH HOH . C 3 HOH A 11 244 244 HOH HOH . C 3 HOH A 12 245 245 HOH HOH . C 3 HOH A 13 246 246 HOH HOH . C 3 HOH A 14 247 247 HOH HOH . C 3 HOH A 15 248 248 HOH HOH . C 3 HOH A 16 249 249 HOH HOH . C 3 HOH A 17 250 250 HOH HOH . C 3 HOH A 18 251 251 HOH HOH . C 3 HOH A 19 252 252 HOH HOH . C 3 HOH A 20 253 253 HOH HOH . C 3 HOH A 21 254 254 HOH HOH . C 3 HOH A 22 255 255 HOH HOH . C 3 HOH A 23 256 256 HOH HOH . C 3 HOH A 24 257 257 HOH HOH . C 3 HOH A 25 258 258 HOH HOH . C 3 HOH A 26 259 259 HOH HOH . C 3 HOH A 27 260 260 HOH HOH . C 3 HOH A 28 261 261 HOH HOH . C 3 HOH A 29 262 262 HOH HOH . C 3 HOH A 30 263 263 HOH HOH . C 3 HOH A 31 264 264 HOH HOH . C 3 HOH A 32 265 265 HOH HOH . C 3 HOH A 33 266 266 HOH HOH . C 3 HOH A 34 267 267 HOH HOH . C 3 HOH A 35 268 268 HOH HOH . C 3 HOH A 36 269 269 HOH HOH . C 3 HOH A 37 270 270 HOH HOH . C 3 HOH A 38 271 271 HOH HOH . C 3 HOH A 39 272 272 HOH HOH . C 3 HOH A 40 273 273 HOH HOH . C 3 HOH A 41 274 274 HOH HOH . C 3 HOH A 42 275 275 HOH HOH . C 3 HOH A 43 276 276 HOH HOH . C 3 HOH A 44 277 277 HOH HOH . C 3 HOH A 45 278 278 HOH HOH . C 3 HOH A 46 279 279 HOH HOH . C 3 HOH A 47 280 280 HOH HOH . C 3 HOH A 48 281 281 HOH HOH . C 3 HOH A 49 282 282 HOH HOH . C 3 HOH A 50 283 283 HOH HOH . C 3 HOH A 51 284 284 HOH HOH . C 3 HOH A 52 285 285 HOH HOH . C 3 HOH A 53 286 286 HOH HOH . C 3 HOH A 54 287 287 HOH HOH . C 3 HOH A 55 288 288 HOH HOH . C 3 HOH A 56 289 289 HOH HOH . C 3 HOH A 57 290 290 HOH HOH . C 3 HOH A 58 291 291 HOH HOH . C 3 HOH A 59 292 292 HOH HOH . C 3 HOH A 60 293 293 HOH HOH . C 3 HOH A 61 294 294 HOH HOH . C 3 HOH A 62 295 295 HOH HOH . C 3 HOH A 63 296 296 HOH HOH . C 3 HOH A 64 297 297 HOH HOH . C 3 HOH A 65 298 298 HOH HOH . C 3 HOH A 66 299 299 HOH HOH . C 3 HOH A 67 300 300 HOH HOH . C 3 HOH A 68 301 301 HOH HOH . C 3 HOH A 69 302 302 HOH HOH . C 3 HOH A 70 303 303 HOH HOH . C 3 HOH A 71 304 304 HOH HOH . C 3 HOH A 72 305 305 HOH HOH . C 3 HOH A 73 306 306 HOH HOH . C 3 HOH A 74 307 307 HOH HOH . C 3 HOH A 75 308 308 HOH HOH . C 3 HOH A 76 309 309 HOH HOH . C 3 HOH A 77 310 310 HOH HOH . C 3 HOH A 78 311 311 HOH HOH . C 3 HOH A 79 312 312 HOH HOH . C 3 HOH A 80 313 313 HOH HOH . C 3 HOH A 81 314 314 HOH HOH . C 3 HOH A 82 315 315 HOH HOH . C 3 HOH A 83 316 316 HOH HOH . C 3 HOH A 84 317 317 HOH HOH . C 3 HOH A 85 318 318 HOH HOH . C 3 HOH A 86 319 319 HOH HOH . C 3 HOH A 87 320 320 HOH HOH . C 3 HOH A 88 321 321 HOH HOH . C 3 HOH A 89 322 322 HOH HOH . C 3 HOH A 90 323 323 HOH HOH . C 3 HOH A 91 324 324 HOH HOH . C 3 HOH A 92 325 325 HOH HOH . C 3 HOH A 93 326 326 HOH HOH . C 3 HOH A 94 327 327 HOH HOH . C 3 HOH A 95 328 328 HOH HOH . C 3 HOH A 96 329 329 HOH HOH . C 3 HOH A 97 330 330 HOH HOH . C 3 HOH A 98 331 331 HOH HOH . C 3 HOH A 99 332 332 HOH HOH . C 3 HOH A 100 333 333 HOH HOH . C 3 HOH A 101 334 334 HOH HOH . C 3 HOH A 102 335 335 HOH HOH . C 3 HOH A 103 336 336 HOH HOH . C 3 HOH A 104 337 337 HOH HOH . C 3 HOH A 105 338 338 HOH HOH . C 3 HOH A 106 339 339 HOH HOH . C 3 HOH A 107 340 340 HOH HOH . C 3 HOH A 108 341 341 HOH HOH . C 3 HOH A 109 342 342 HOH HOH . C 3 HOH A 110 343 343 HOH HOH . C 3 HOH A 111 344 344 HOH HOH . C 3 HOH A 112 345 345 HOH HOH . C 3 HOH A 113 346 346 HOH HOH . C 3 HOH A 114 347 347 HOH HOH . C 3 HOH A 115 348 348 HOH HOH . C 3 HOH A 116 349 349 HOH HOH . C 3 HOH A 117 350 350 HOH HOH . C 3 HOH A 118 351 351 HOH HOH . C 3 HOH A 119 352 352 HOH HOH . C 3 HOH A 120 353 353 HOH HOH . C 3 HOH A 121 354 354 HOH HOH . C 3 HOH A 122 355 355 HOH HOH . C 3 HOH A 123 356 356 HOH HOH . C 3 HOH A 124 357 357 HOH HOH . C 3 HOH A 125 358 358 HOH HOH . C 3 HOH A 126 359 359 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . B 2 -13.727 19.742 19.243 1 5.36 ? N1 GSH 233 A 1 HETATM 2 C CA1 GSH . . . B 2 -13.359 19.764 20.713 1 3.11 ? CA1 GSH 233 A 1 HETATM 3 C C1 GSH . . . B 2 -12.439 18.608 21.076 1 2 ? C1 GSH 233 A 1 HETATM 4 O O11 GSH . . . B 2 -12.141 17.739 20.272 1 4.11 ? O11 GSH 233 A 1 HETATM 5 O O12 GSH . . . B 2 -12.124 18.482 22.338 1 2 ? O12 GSH 233 A 1 HETATM 6 C CB1 GSH . . . B 2 -12.555 21.08 20.965 1 3.53 ? CB1 GSH 233 A 1 HETATM 7 C CG1 GSH . . . B 2 -13.044 21.678 22.172 1 6.4 ? CG1 GSH 233 A 1 HETATM 8 C CD1 GSH . . . B 2 -13.987 22.767 22.349 1 8.44 ? CD1 GSH 233 A 1 HETATM 9 O OE1 GSH . . . B 2 -14.424 23.324 21.297 1 9.87 ? OE1 GSH 233 A 1 HETATM 10 N N2 GSH . . . B 2 -13.917 23.253 23.576 1 9.82 ? N2 GSH 233 A 1 HETATM 11 C CA2 GSH . . . B 2 -14.865 23.371 24.655 1 12.94 ? CA2 GSH 233 A 1 HETATM 12 C C2 GSH . . . B 2 -14.395 24.514 25.646 1 12.28 ? C2 GSH 233 A 1 HETATM 13 O O2 GSH . . . B 2 -15.309 24.877 26.429 1 12.55 ? O2 GSH 233 A 1 HETATM 14 C CB2 GSH . . . B 2 -15.345 22.1 25.333 1 13.47 ? CB2 GSH 233 A 1 HETATM 15 S SG2 GSH . . . B 2 -16.844 22.29 26.26 1 19.31 ? SG2 GSH 233 A 1 HETATM 16 N N3 GSH . . . B 2 -13.523 25.365 25.182 1 11.13 ? N3 GSH 233 A 1 HETATM 17 C CA3 GSH . . . B 2 -13.026 26.554 25.859 1 10.11 ? CA3 GSH 233 A 1 HETATM 18 C C3 GSH . . . B 2 -11.824 27.137 25.251 1 9.89 ? C3 GSH 233 A 1 HETATM 19 O O31 GSH . . . B 2 -11.757 27.617 24.101 1 10.67 ? O31 GSH 233 A 1 HETATM 20 O O32 GSH . . . B 2 -10.751 27.404 25.993 1 9.19 ? O32 GSH 233 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #