data_1GNK # _model_server_result.job_id nTuhFRLWf8Uoa4Ym5GgVeA _model_server_result.datetime_utc '2024-11-27 04:08:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gnk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":135}' # _entry.id 1GNK # _exptl.entry_id 1GNK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GNK _cell.length_a 85.53 _cell.length_b 85.53 _cell.length_c 85.53 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GNK _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS trimeric 3 author_and_software_defined_assembly 1 PQS trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1,2,3 B,D,F 2 1,4,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 4 'crystal symmetry operation' 7_564 -z+1/2,-x+1,y-1/2 0 0 -1 -1 0 0 0 1 0 42.765 85.53 -42.765 5 'crystal symmetry operation' 10_655 -y+1,z+1/2,-x+1/2 0 -1 0 0 0 1 -1 0 0 85.53 42.765 42.765 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 277 n n S O2 SO4 doub 278 n n S O3 SO4 sing 279 n n S O4 SO4 sing 280 n n # _atom_sites.entry_id 1GNK _atom_sites.fract_transf_matrix[1][1] 0.011692 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011692 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011692 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 135 135 SO4 SO4 . D 2 SO4 B 1 136 136 SO4 SO4 . E 3 HOH A 1 137 137 HOH HOH . E 3 HOH A 2 139 139 HOH HOH . E 3 HOH A 3 140 140 HOH HOH . E 3 HOH A 4 145 145 HOH HOH . E 3 HOH A 5 146 146 HOH HOH . E 3 HOH A 6 147 147 HOH HOH . E 3 HOH A 7 148 148 HOH HOH . E 3 HOH A 8 149 149 HOH HOH . E 3 HOH A 9 150 150 HOH HOH . E 3 HOH A 10 151 151 HOH HOH . E 3 HOH A 11 152 152 HOH HOH . E 3 HOH A 12 153 153 HOH HOH . E 3 HOH A 13 154 154 HOH HOH . E 3 HOH A 14 155 155 HOH HOH . E 3 HOH A 15 156 156 HOH HOH . E 3 HOH A 16 157 157 HOH HOH . E 3 HOH A 17 172 172 HOH HOH . E 3 HOH A 18 173 173 HOH HOH . E 3 HOH A 19 174 174 HOH HOH . E 3 HOH A 20 175 175 HOH HOH . E 3 HOH A 21 176 176 HOH HOH . E 3 HOH A 22 177 177 HOH HOH . E 3 HOH A 23 178 178 HOH HOH . E 3 HOH A 24 179 179 HOH HOH . E 3 HOH A 25 180 180 HOH HOH . E 3 HOH A 26 181 181 HOH HOH . E 3 HOH A 27 182 182 HOH HOH . E 3 HOH A 28 183 183 HOH HOH . E 3 HOH A 29 184 184 HOH HOH . E 3 HOH A 30 190 190 HOH HOH . E 3 HOH A 31 192 192 HOH HOH . E 3 HOH A 32 193 193 HOH HOH . E 3 HOH A 33 194 194 HOH HOH . E 3 HOH A 34 197 197 HOH HOH . E 3 HOH A 35 200 200 HOH HOH . E 3 HOH A 36 201 201 HOH HOH . E 3 HOH A 37 202 202 HOH HOH . E 3 HOH A 38 203 203 HOH HOH . E 3 HOH A 39 204 204 HOH HOH . E 3 HOH A 40 205 205 HOH HOH . E 3 HOH A 41 206 206 HOH HOH . E 3 HOH A 42 207 207 HOH HOH . E 3 HOH A 43 208 208 HOH HOH . E 3 HOH A 44 209 209 HOH HOH . E 3 HOH A 45 220 220 HOH HOH . E 3 HOH A 46 221 221 HOH HOH . E 3 HOH A 47 222 222 HOH HOH . E 3 HOH A 48 223 223 HOH HOH . E 3 HOH A 49 224 224 HOH HOH . E 3 HOH A 50 225 225 HOH HOH . E 3 HOH A 51 226 226 HOH HOH . E 3 HOH A 52 227 227 HOH HOH . E 3 HOH A 53 228 228 HOH HOH . E 3 HOH A 54 229 229 HOH HOH . E 3 HOH A 55 231 231 HOH HOH . E 3 HOH A 56 232 232 HOH HOH . E 3 HOH A 57 233 233 HOH HOH . E 3 HOH A 58 234 234 HOH HOH . E 3 HOH A 59 235 235 HOH HOH . E 3 HOH A 60 242 242 HOH HOH . E 3 HOH A 61 243 243 HOH HOH . E 3 HOH A 62 245 245 HOH HOH . E 3 HOH A 63 246 246 HOH HOH . E 3 HOH A 64 247 247 HOH HOH . E 3 HOH A 65 248 248 HOH HOH . E 3 HOH A 66 249 249 HOH HOH . E 3 HOH A 67 253 253 HOH HOH . E 3 HOH A 68 254 254 HOH HOH . E 3 HOH A 69 261 261 HOH HOH . E 3 HOH A 70 262 262 HOH HOH . F 3 HOH B 1 138 138 HOH HOH . F 3 HOH B 2 141 141 HOH HOH . F 3 HOH B 3 142 142 HOH HOH . F 3 HOH B 4 143 143 HOH HOH . F 3 HOH B 5 144 144 HOH HOH . F 3 HOH B 6 158 158 HOH HOH . F 3 HOH B 7 159 159 HOH HOH . F 3 HOH B 8 160 160 HOH HOH . F 3 HOH B 9 161 161 HOH HOH . F 3 HOH B 10 162 162 HOH HOH . F 3 HOH B 11 163 163 HOH HOH . F 3 HOH B 12 164 164 HOH HOH . F 3 HOH B 13 165 165 HOH HOH . F 3 HOH B 14 166 166 HOH HOH . F 3 HOH B 15 167 167 HOH HOH . F 3 HOH B 16 168 168 HOH HOH . F 3 HOH B 17 169 169 HOH HOH . F 3 HOH B 18 170 170 HOH HOH . F 3 HOH B 19 171 171 HOH HOH . F 3 HOH B 20 185 185 HOH HOH . F 3 HOH B 21 186 186 HOH HOH . F 3 HOH B 22 187 187 HOH HOH . F 3 HOH B 23 188 188 HOH HOH . F 3 HOH B 24 189 189 HOH HOH . F 3 HOH B 25 191 191 HOH HOH . F 3 HOH B 26 195 195 HOH HOH . F 3 HOH B 27 196 196 HOH HOH . F 3 HOH B 28 198 198 HOH HOH . F 3 HOH B 29 199 199 HOH HOH . F 3 HOH B 30 210 210 HOH HOH . F 3 HOH B 31 211 211 HOH HOH . F 3 HOH B 32 212 212 HOH HOH . F 3 HOH B 33 213 213 HOH HOH . F 3 HOH B 34 214 214 HOH HOH . F 3 HOH B 35 215 215 HOH HOH . F 3 HOH B 36 216 216 HOH HOH . F 3 HOH B 37 217 217 HOH HOH . F 3 HOH B 38 218 218 HOH HOH . F 3 HOH B 39 219 219 HOH HOH . F 3 HOH B 40 230 230 HOH HOH . F 3 HOH B 41 236 236 HOH HOH . F 3 HOH B 42 237 237 HOH HOH . F 3 HOH B 43 238 238 HOH HOH . F 3 HOH B 44 239 239 HOH HOH . F 3 HOH B 45 240 240 HOH HOH . F 3 HOH B 46 241 241 HOH HOH . F 3 HOH B 47 244 244 HOH HOH . F 3 HOH B 48 250 250 HOH HOH . F 3 HOH B 49 251 251 HOH HOH . F 3 HOH B 50 252 252 HOH HOH . F 3 HOH B 51 255 255 HOH HOH . F 3 HOH B 52 256 256 HOH HOH . F 3 HOH B 53 257 257 HOH HOH . F 3 HOH B 54 258 258 HOH HOH . F 3 HOH B 55 259 259 HOH HOH . F 3 HOH B 56 260 260 HOH HOH . F 3 HOH B 57 263 263 HOH HOH . F 3 HOH B 58 264 264 HOH HOH . F 3 HOH B 59 265 265 HOH HOH . F 3 HOH B 60 266 266 HOH HOH . F 3 HOH B 61 267 267 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 2 10.914 31.783 3.454 1 25.73 ? S SO4 135 A 1 HETATM 2 O O1 SO4 . . . C 2 9.986 32.555 4.308 1 26.18 ? O1 SO4 135 A 1 HETATM 3 O O2 SO4 . . . C 2 10.692 32.177 2.006 1 26.36 ? O2 SO4 135 A 1 HETATM 4 O O3 SO4 . . . C 2 12.394 32.062 3.801 1 23.91 ? O3 SO4 135 A 1 HETATM 5 O O4 SO4 . . . C 2 10.714 30.3 3.654 1 26.35 ? O4 SO4 135 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #