data_1GOS # _model_server_result.job_id K-x0vKZAX47GI6ihv8hSTQ _model_server_result.datetime_utc '2024-11-22 14:56:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gos # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":600}' # _entry.id 1GOS # _exptl.entry_id 1GOS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GOS _cell.length_a 138.8 _cell.length_b 224.3 _cell.length_c 87.2 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GOS _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 397 A CYS 397 1_555 C C8M FAD . A FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? covale ? covale2 C N5 FAD . A FAD 600 1_555 D C11 NYP . A NYP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? covale ? covale3 B SG CYS 397 B CYS 397 1_555 E C8M FAD . B FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.663 ? covale ? covale4 E N5 FAD . B FAD 600 1_555 F C11 NYP . B NYP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 1GOS _atom_sites.fract_transf_matrix[1][1] 0.007205 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004458 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011468 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 600 600 FAD FAD . D 3 NYP A 1 601 601 NYP NYP . E 2 FAD B 1 600 600 FAD FAD . F 3 NYP B 1 601 601 NYP NYP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . E 2 29.529 126.626 9.087 1 27.98 ? PA FAD 600 B 1 HETATM 2 O O1A FAD . . . E 2 30.314 126.342 10.31 1 27.28 ? O1A FAD 600 B 1 HETATM 3 O O2A FAD . . . E 2 28.126 125.988 8.926 1 25.55 ? O2A FAD 600 B 1 HETATM 4 O O5B FAD . . . E 2 30.406 126.208 7.796 1 31.89 ? O5B FAD 600 B 1 HETATM 5 C C5B FAD . . . E 2 31.807 126.267 7.899 1 34.65 ? C5B FAD 600 B 1 HETATM 6 C C4B FAD . . . E 2 32.517 125.368 6.903 1 34.66 ? C4B FAD 600 B 1 HETATM 7 O O4B FAD . . . E 2 33.784 125.908 6.588 1 38.11 ? O4B FAD 600 B 1 HETATM 8 C C3B FAD . . . E 2 32.891 124.109 7.62 1 36.26 ? C3B FAD 600 B 1 HETATM 9 O O3B FAD . . . E 2 32.847 123.102 6.649 1 34.06 ? O3B FAD 600 B 1 HETATM 10 C C2B FAD . . . E 2 34.347 124.364 7.917 1 34.66 ? C2B FAD 600 B 1 HETATM 11 O O2B FAD . . . E 2 34.971 123.126 8.018 1 34.22 ? O2B FAD 600 B 1 HETATM 12 C C1B FAD . . . E 2 34.811 124.97 6.633 1 36.33 ? C1B FAD 600 B 1 HETATM 13 N N9A FAD . . . E 2 36.117 125.634 6.746 1 40.27 ? N9A FAD 600 B 1 HETATM 14 C C8A FAD . . . E 2 36.508 126.331 7.84 1 44.47 ? C8A FAD 600 B 1 HETATM 15 N N7A FAD . . . E 2 37.754 126.803 7.678 1 43.82 ? N7A FAD 600 B 1 HETATM 16 C C5A FAD . . . E 2 38.163 126.421 6.474 1 43.72 ? C5A FAD 600 B 1 HETATM 17 C C6A FAD . . . E 2 39.36 126.693 5.869 1 46.24 ? C6A FAD 600 B 1 HETATM 18 N N6A FAD . . . E 2 40.161 127.467 6.596 1 50.07 ? N6A FAD 600 B 1 HETATM 19 N N1A FAD . . . E 2 39.622 126.257 4.593 1 44.56 ? N1A FAD 600 B 1 HETATM 20 C C2A FAD . . . E 2 38.62 125.535 3.979 1 46.35 ? C2A FAD 600 B 1 HETATM 21 N N3A FAD . . . E 2 37.423 125.227 4.614 1 45.3 ? N3A FAD 600 B 1 HETATM 22 C C4A FAD . . . E 2 37.17 125.691 5.862 1 43 ? C4A FAD 600 B 1 HETATM 23 N N1 FAD . . . E 2 21.005 126.921 14.161 1 43.02 ? N1 FAD 600 B 1 HETATM 24 C C2 FAD . . . E 2 19.719 126.545 13.818 1 44.02 ? C2 FAD 600 B 1 HETATM 25 O O2 FAD . . . E 2 19.224 127.007 12.769 1 44.32 ? O2 FAD 600 B 1 HETATM 26 N N3 FAD . . . E 2 19.041 125.677 14.671 1 39.73 ? N3 FAD 600 B 1 HETATM 27 C C4 FAD . . . E 2 19.646 125.175 15.805 1 36.42 ? C4 FAD 600 B 1 HETATM 28 O O4 FAD . . . E 2 19.029 124.374 16.51 1 37.54 ? O4 FAD 600 B 1 HETATM 29 C C4X FAD . . . E 2 20.937 125.588 16.132 1 35.3 ? C4X FAD 600 B 1 HETATM 30 N N5 FAD . . . E 2 21.59 125.112 17.247 1 37.72 ? N5 FAD 600 B 1 HETATM 31 C C5X FAD . . . E 2 22.966 125.123 17.279 1 31.89 ? C5X FAD 600 B 1 HETATM 32 C C6 FAD . . . E 2 23.652 124.426 18.26 1 23.85 ? C6 FAD 600 B 1 HETATM 33 C C7 FAD . . . E 2 24.992 124.143 18.039 1 26.6 ? C7 FAD 600 B 1 HETATM 34 C C7M FAD . . . E 2 25.809 123.294 18.951 1 27.43 ? C7M FAD 600 B 1 HETATM 35 C C8 FAD . . . E 2 25.661 124.579 16.913 1 30.86 ? C8 FAD 600 B 1 HETATM 36 C C8M FAD . . . E 2 27.115 124.221 16.788 1 31.31 ? C8M FAD 600 B 1 HETATM 37 C C9 FAD . . . E 2 24.985 125.317 15.948 1 32.74 ? C9 FAD 600 B 1 HETATM 38 C C9A FAD . . . E 2 23.631 125.576 16.143 1 32.87 ? C9A FAD 600 B 1 HETATM 39 N N10 FAD . . . E 2 22.972 126.356 15.232 1 32.18 ? N10 FAD 600 B 1 HETATM 40 C C10 FAD . . . E 2 21.616 126.461 15.307 1 35.51 ? C10 FAD 600 B 1 HETATM 41 C C1' FAD . . . E 2 23.743 127.394 14.476 1 33.85 ? C1' FAD 600 B 1 HETATM 42 C C2' FAD . . . E 2 23.963 126.917 13.046 1 36.75 ? C2' FAD 600 B 1 HETATM 43 O O2' FAD . . . E 2 24.607 125.665 13.078 1 40.36 ? O2' FAD 600 B 1 HETATM 44 C C3' FAD . . . E 2 24.735 127.955 12.242 1 37.54 ? C3' FAD 600 B 1 HETATM 45 O O3' FAD . . . E 2 23.79 129.013 12.173 1 41.18 ? O3' FAD 600 B 1 HETATM 46 C C4' FAD . . . E 2 25.183 127.453 10.854 1 37.35 ? C4' FAD 600 B 1 HETATM 47 O O4' FAD . . . E 2 25.557 126.097 10.906 1 41.03 ? O4' FAD 600 B 1 HETATM 48 C C5' FAD . . . E 2 26.338 128.185 10.169 1 32.39 ? C5' FAD 600 B 1 HETATM 49 O O5' FAD . . . E 2 26.748 127.529 8.974 1 30.29 ? O5' FAD 600 B 1 HETATM 50 P P FAD . . . E 2 27.808 128.293 8.044 1 24.85 ? P FAD 600 B 1 HETATM 51 O O1P FAD . . . E 2 28.082 127.657 6.751 1 24.3 ? O1P FAD 600 B 1 HETATM 52 O O2P FAD . . . E 2 27.301 129.717 7.918 1 24.13 ? O2P FAD 600 B 1 HETATM 53 O O3P FAD . . . E 2 29.147 128.171 8.923 1 27.49 ? O3P FAD 600 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #