data_1GOS # _model_server_result.job_id T9vSauogmb4b2osukkyI5A _model_server_result.datetime_utc '2024-11-22 14:54:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gos # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 1GOS # _exptl.entry_id 1GOS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.267 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(E)-METHYL](PHENYL)-N-[(E)-2-PROPENYLIDENE]METHANAMINIUM _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GOS _cell.length_a 138.8 _cell.length_b 224.3 _cell.length_c 87.2 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GOS _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 397 A CYS 397 1_555 C C8M FAD . A FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? covale ? covale2 C N5 FAD . A FAD 600 1_555 D C11 NYP . A NYP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? covale ? covale3 B SG CYS 397 B CYS 397 1_555 E C8M FAD . B FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.663 ? covale ? covale4 E N5 FAD . B FAD 600 1_555 F C11 NYP . B NYP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? # _chem_comp.formula 'C11 H18 N 1' _chem_comp.formula_weight 164.267 _chem_comp.id NYP _chem_comp.mon_nstd_flag . _chem_comp.name N-[(E)-METHYL](PHENYL)-N-[(E)-2-PROPENYLIDENE]METHANAMINIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8N N8 NYP sing 326 n n C8N H8N1 NYP sing 327 n n C8N H8N2 NYP sing 328 n n C8N H8N3 NYP sing 329 n n N8 C9 NYP doub 330 e n N8 C7 NYP sing 331 n n C9 C10 NYP sing 332 n n C9 H9 NYP sing 333 n n C10 C11 NYP doub 334 n n C10 H10 NYP sing 335 n n C11 H11 NYP sing 336 n n C11 H111 NYP sing 337 n n C7 C1 NYP sing 338 n n C7 HC71 NYP sing 339 n n C7 HC72 NYP sing 340 n n C1 C2 NYP sing 341 n n C1 C6 NYP sing 342 n n C1 H1 NYP sing 343 n n C2 C3 NYP sing 344 n n C2 H2 NYP sing 345 n n C2 H21 NYP sing 346 n n C3 C4 NYP sing 347 n n C3 H3 NYP sing 348 n n C3 H31 NYP sing 349 n n C4 C5 NYP doub 350 n n C4 H4 NYP sing 351 n n C5 C6 NYP sing 352 n n C5 H5 NYP sing 353 n n C6 H6 NYP sing 354 n n C6 H61 NYP sing 355 n n # _atom_sites.entry_id 1GOS _atom_sites.fract_transf_matrix[1][1] 0.007205 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004458 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011468 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 600 600 FAD FAD . D 3 NYP A 1 601 601 NYP NYP . E 2 FAD B 1 600 600 FAD FAD . F 3 NYP B 1 601 601 NYP NYP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8N NYP . . . D 3 56.103 153.088 26.363 1 51.96 ? C8N NYP 601 A 1 HETATM 2 N N8 NYP . . . D 3 55.077 153.58 25.456 1 53.91 ? N8 NYP 601 A 1 HETATM 3 C C9 NYP . . . D 3 54.949 152.995 24.279 1 49.38 ? C9 NYP 601 A 1 HETATM 4 C C10 NYP . . . D 3 55.829 151.802 24.031 1 46.64 ? C10 NYP 601 A 1 HETATM 5 C C11 NYP . . . D 3 56.135 151.535 22.767 1 46.65 ? C11 NYP 601 A 1 HETATM 6 C C7 NYP . . . D 3 54.301 154.797 25.669 1 54.34 ? C7 NYP 601 A 1 HETATM 7 C C1 NYP . . . D 3 53.857 155.093 27.071 1 52.25 ? C1 NYP 601 A 1 HETATM 8 C C2 NYP . . . D 3 53.709 156.417 27.458 1 55.33 ? C2 NYP 601 A 1 HETATM 9 C C3 NYP . . . D 3 53.232 156.712 28.738 1 59.09 ? C3 NYP 601 A 1 HETATM 10 C C4 NYP . . . D 3 52.902 155.678 29.625 1 58.79 ? C4 NYP 601 A 1 HETATM 11 C C5 NYP . . . D 3 53.056 154.354 29.221 1 55.63 ? C5 NYP 601 A 1 HETATM 12 C C6 NYP . . . D 3 53.521 154.065 27.932 1 53.25 ? C6 NYP 601 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #