data_1GSL
#
_model_server_result.job_id            IYeQx_bWUy5kW2PxfDnF3A 
_model_server_result.datetime_utc      '2024-10-13 00:19:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1gsl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":251}' 
#
_entry.id    1GSL 
#
_exptl.entry_id    1GSL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1GSL 
_cell.length_a            78.9 
_cell.length_b            78.9 
_cell.length_c            89.1 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1GSL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
2 oligosaccharide 
3 oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 GAL MAG C1 O1 . O4 HO4 . sing 
2 ? 2 3 2 FUC GAL C1 O1 . O2 HO2 . sing 
3 ? 2 4 1 FUC MAG C1 O1 . O3 HO3 . sing 
4 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
5 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing 
6 ? 3 4 1 FUC NAG C1 O1 . O3 HO3 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B MAG 1 B 1 MAG ? 255 MAG 
2 n B GAL 2 B 2 GAL ? 253 GAL 
2 n B FUC 3 B 3 FUC ? 252 FUC 
2 n B FUC 4 B 4 FUC ? 254 FUC 
3 n C NAG 1 C 1 NAG ? 257 NAG 
3 n C NAG 2 C 2 NAG ? 256 NAG 
3 n C BMA 3 C 3 BMA ? 258 MAN 
3 n C FUC 4 C 4 FUC ? 262 FUC 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PCA 1 A PCA 1 1_555 A N ASN 2 A ASN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale2 A ND2 ASN 18 A ASN 18 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.46 ? 
covale ? covale3 B O4 MAG . B MAG 1 1_555 B C1 GAL . B GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.397 ? 
covale ? covale4 B O3 MAG . B MAG 1 1_555 B C1 FUC . B FUC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.403 ? 
covale ? covale5 B O2 GAL . B GAL 2 1_555 B C1 FUC . B FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.4 ? 
covale ? covale6 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.39 ? 
covale ? covale7 C O3 NAG . C NAG 1 1_555 C C1 FUC . C FUC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.393 ? 
covale ? covale8 C O4 NAG . C NAG 2 1_555 C C1 BMA . C BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.384 ? 
metalc ? metalc1 A OE2 GLU 129 A GLU 129 1_555 D MN MN . A MN 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc2 A OD2 ASP 131 A ASP 131 1_555 D MN MN . A MN 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
metalc ? metalc3 A OD1 ASP 131 A ASP 131 1_555 E CA CA . A CA 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
metalc ? metalc4 A OD2 ASP 131 A ASP 131 1_555 E CA CA . A CA 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? 
metalc ? metalc5 A O TRP 133 A TRP 133 1_555 E CA CA . A CA 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc6 A OD1 ASN 135 A ASN 135 1_555 E CA CA . A CA 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc7 A OD1 ASP 140 A ASP 140 1_555 D MN MN . A MN 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? 
metalc ? metalc8 A OD2 ASP 140 A ASP 140 1_555 E CA CA . A CA 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc9 A NE2 HIS 145 A HIS 145 1_555 D MN MN . A MN 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc10 D MN MN . A MN 250 1_555 F O HOH . A HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? 
metalc ? metalc11 D MN MN . A MN 250 1_555 F O HOH . A HOH 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc12 E CA CA . A CA 251 1_555 F O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc13 E CA CA . A CA 251 1_555 F O HOH . A HOH 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1GSL 
_atom_sites.fract_transf_matrix[1][1]    0.012674 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012674 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011223 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 MN A 1 250 250 MN MN . 
E 5 CA A 1 251 251 CA CA . 
F 6 HOH A 1 301 301 HOH HOH . 
F 6 HOH A 2 302 302 HOH HOH . 
F 6 HOH A 3 303 303 HOH HOH . 
F 6 HOH A 4 304 304 HOH HOH . 
F 6 HOH A 5 305 305 HOH HOH . 
F 6 HOH A 6 306 306 HOH HOH . 
F 6 HOH A 7 307 307 HOH HOH . 
F 6 HOH A 8 308 308 HOH HOH . 
F 6 HOH A 9 309 309 HOH HOH . 
F 6 HOH A 10 310 310 HOH HOH . 
F 6 HOH A 11 311 311 HOH HOH . 
F 6 HOH A 12 312 312 HOH HOH . 
F 6 HOH A 13 313 313 HOH HOH . 
F 6 HOH A 14 314 314 HOH HOH . 
F 6 HOH A 15 315 315 HOH HOH . 
F 6 HOH A 16 316 316 HOH HOH . 
F 6 HOH A 17 317 317 HOH HOH . 
F 6 HOH A 18 318 318 HOH HOH . 
F 6 HOH A 19 319 319 HOH HOH . 
F 6 HOH A 20 320 320 HOH HOH . 
F 6 HOH A 21 321 321 HOH HOH . 
F 6 HOH A 22 322 322 HOH HOH . 
F 6 HOH A 23 323 323 HOH HOH . 
F 6 HOH A 24 324 324 HOH HOH . 
F 6 HOH A 25 325 325 HOH HOH . 
F 6 HOH A 26 326 326 HOH HOH . 
F 6 HOH A 27 328 328 HOH HOH . 
F 6 HOH A 28 329 329 HOH HOH . 
F 6 HOH A 29 330 330 HOH HOH . 
F 6 HOH A 30 331 331 HOH HOH . 
F 6 HOH A 31 332 332 HOH HOH . 
F 6 HOH A 32 333 333 HOH HOH . 
F 6 HOH A 33 334 334 HOH HOH . 
F 6 HOH A 34 335 335 HOH HOH . 
F 6 HOH A 35 336 336 HOH HOH . 
F 6 HOH A 36 337 337 HOH HOH . 
F 6 HOH A 37 338 338 HOH HOH . 
F 6 HOH A 38 339 339 HOH HOH . 
F 6 HOH A 39 340 340 HOH HOH . 
F 6 HOH A 40 341 341 HOH HOH . 
F 6 HOH A 41 342 342 HOH HOH . 
F 6 HOH A 42 343 343 HOH HOH . 
F 6 HOH A 43 344 344 HOH HOH . 
F 6 HOH A 44 345 345 HOH HOH . 
F 6 HOH A 45 346 346 HOH HOH . 
F 6 HOH A 46 347 347 HOH HOH . 
F 6 HOH A 47 348 348 HOH HOH . 
F 6 HOH A 48 349 349 HOH HOH . 
F 6 HOH A 49 350 350 HOH HOH . 
F 6 HOH A 50 351 351 HOH HOH . 
F 6 HOH A 51 352 352 HOH HOH . 
F 6 HOH A 52 353 353 HOH HOH . 
F 6 HOH A 53 354 354 HOH HOH . 
F 6 HOH A 54 355 355 HOH HOH . 
F 6 HOH A 55 356 356 HOH HOH . 
F 6 HOH A 56 357 357 HOH HOH . 
F 6 HOH A 57 358 358 HOH HOH . 
F 6 HOH A 58 359 359 HOH HOH . 
F 6 HOH A 59 360 360 HOH HOH . 
F 6 HOH A 60 361 361 HOH HOH . 
F 6 HOH A 61 362 362 HOH HOH . 
F 6 HOH A 62 363 363 HOH HOH . 
F 6 HOH A 63 364 364 HOH HOH . 
F 6 HOH A 64 365 365 HOH HOH . 
F 6 HOH A 65 366 366 HOH HOH . 
F 6 HOH A 66 367 367 HOH HOH . 
F 6 HOH A 67 368 368 HOH HOH . 
F 6 HOH A 68 369 369 HOH HOH . 
F 6 HOH A 69 370 370 HOH HOH . 
F 6 HOH A 70 371 371 HOH HOH . 
F 6 HOH A 71 372 372 HOH HOH . 
F 6 HOH A 72 373 373 HOH HOH . 
F 6 HOH A 73 374 374 HOH HOH . 
F 6 HOH A 74 375 375 HOH HOH . 
F 6 HOH A 75 376 376 HOH HOH . 
F 6 HOH A 76 377 377 HOH HOH . 
F 6 HOH A 77 378 378 HOH HOH . 
F 6 HOH A 78 379 379 HOH HOH . 
F 6 HOH A 79 380 380 HOH HOH . 
F 6 HOH A 80 381 381 HOH HOH . 
F 6 HOH A 81 382 382 HOH HOH . 
F 6 HOH A 82 383 383 HOH HOH . 
F 6 HOH A 83 384 384 HOH HOH . 
F 6 HOH A 84 385 385 HOH HOH . 
F 6 HOH A 85 387 387 HOH HOH . 
F 6 HOH A 86 388 388 HOH HOH . 
F 6 HOH A 87 389 389 HOH HOH . 
F 6 HOH A 88 390 390 HOH HOH . 
F 6 HOH A 89 391 391 HOH HOH . 
F 6 HOH A 90 392 392 HOH HOH . 
F 6 HOH A 91 393 393 HOH HOH . 
F 6 HOH A 92 394 394 HOH HOH . 
F 6 HOH A 93 395 395 HOH HOH . 
F 6 HOH A 94 396 396 HOH HOH . 
F 6 HOH A 95 397 397 HOH HOH . 
F 6 HOH A 96 398 398 HOH HOH . 
F 6 HOH A 97 399 399 HOH HOH . 
F 6 HOH A 98 400 400 HOH HOH . 
F 6 HOH A 99 401 401 HOH HOH . 
F 6 HOH A 100 402 402 HOH HOH . 
F 6 HOH A 101 403 403 HOH HOH . 
F 6 HOH A 102 404 404 HOH HOH . 
F 6 HOH A 103 405 405 HOH HOH . 
F 6 HOH A 104 406 406 HOH HOH . 
F 6 HOH A 105 407 407 HOH HOH . 
F 6 HOH A 106 408 408 HOH HOH . 
F 6 HOH A 107 409 409 HOH HOH . 
F 6 HOH A 108 410 410 HOH HOH . 
F 6 HOH A 109 411 411 HOH HOH . 
F 6 HOH A 110 412 412 HOH HOH . 
F 6 HOH A 111 413 413 HOH HOH . 
F 6 HOH A 112 415 415 HOH HOH . 
F 6 HOH A 113 416 416 HOH HOH . 
F 6 HOH A 114 417 417 HOH HOH . 
F 6 HOH A 115 419 419 HOH HOH . 
F 6 HOH A 116 420 420 HOH HOH . 
F 6 HOH A 117 421 421 HOH HOH . 
F 6 HOH A 118 422 422 HOH HOH . 
F 6 HOH A 119 423 423 HOH HOH . 
F 6 HOH A 120 425 425 HOH HOH . 
F 6 HOH A 121 426 426 HOH HOH . 
F 6 HOH A 122 427 427 HOH HOH . 
F 6 HOH A 123 428 428 HOH HOH . 
F 6 HOH A 124 429 429 HOH HOH . 
F 6 HOH A 125 430 430 HOH HOH . 
F 6 HOH A 126 431 431 HOH HOH . 
F 6 HOH A 127 432 432 HOH HOH . 
F 6 HOH A 128 433 433 HOH HOH . 
F 6 HOH A 129 434 434 HOH HOH . 
F 6 HOH A 130 435 435 HOH HOH . 
F 6 HOH A 131 450 450 HOH HOH . 
F 6 HOH A 132 451 451 HOH HOH . 
F 6 HOH A 133 452 452 HOH HOH . 
F 6 HOH A 134 454 454 HOH HOH . 
F 6 HOH A 135 457 457 HOH HOH . 
F 6 HOH A 136 458 458 HOH HOH . 
F 6 HOH A 137 459 459 HOH HOH . 
F 6 HOH A 138 461 461 HOH HOH . 
F 6 HOH A 139 462 462 HOH HOH . 
F 6 HOH A 140 463 463 HOH HOH . 
F 6 HOH A 141 464 464 HOH HOH . 
F 6 HOH A 142 465 465 HOH HOH . 
F 6 HOH A 143 466 466 HOH HOH . 
F 6 HOH A 144 467 467 HOH HOH . 
F 6 HOH A 145 468 468 HOH HOH . 
F 6 HOH A 146 469 469 HOH HOH . 
F 6 HOH A 147 470 470 HOH HOH . 
F 6 HOH A 148 471 471 HOH HOH . 
F 6 HOH A 149 472 472 HOH HOH . 
F 6 HOH A 150 473 473 HOH HOH . 
F 6 HOH A 151 474 474 HOH HOH . 
F 6 HOH A 152 475 475 HOH HOH . 
F 6 HOH A 153 476 476 HOH HOH . 
F 6 HOH A 154 477 477 HOH HOH . 
F 6 HOH A 155 478 478 HOH HOH . 
F 6 HOH A 156 479 479 HOH HOH . 
F 6 HOH A 157 480 480 HOH HOH . 
F 6 HOH A 158 481 481 HOH HOH . 
F 6 HOH A 159 482 482 HOH HOH . 
F 6 HOH A 160 483 483 HOH HOH . 
F 6 HOH A 161 484 484 HOH HOH . 
F 6 HOH A 162 485 485 HOH HOH . 
F 6 HOH A 163 486 486 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               29.182 
_atom_site.Cartn_y               14.661 
_atom_site.Cartn_z               21.233 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        24.08 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           251 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#