data_1GT3
#
_model_server_result.job_id            YLViAZeKhI-hIdjUkHjrCA 
_model_server_result.datetime_utc      '2024-11-05 08:31:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1gt3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1161}' 
#
_entry.id    1GT3 
#
_exptl.entry_id    1GT3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              128.212 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (3S)-1-octen-3-ol 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.32 
_cell.angle_gamma         90 
_cell.entry_id            1GT3 
_cell.length_a            55.589 
_cell.length_b            65.206 
_cell.length_c            42.153 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1GT3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
_chem_comp.formula           'C8 H16 O' 
_chem_comp.formula_weight    128.212 
_chem_comp.id                3OM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (3S)-1-octen-3-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 3OM doub 1 n n 
O1 C3 3OM sing 2 n n 
C2 C3 3OM sing 3 n n 
C3 C4 3OM sing 4 n n 
C4 C5 3OM sing 5 n n 
C5 C6 3OM sing 6 n n 
C6 C7 3OM sing 7 n n 
C7 C8 3OM sing 8 n n 
C1 H1 3OM sing 9 n n 
C1 H1A 3OM sing 10 n n 
O1 HO1 3OM sing 11 n n 
C2 H2 3OM sing 12 n n 
C3 H3 3OM sing 13 n n 
C4 H4 3OM sing 14 n n 
C4 H4A 3OM sing 15 n n 
C5 H5 3OM sing 16 n n 
C5 H5A 3OM sing 17 n n 
C6 H6 3OM sing 18 n n 
C6 H6A 3OM sing 19 n n 
C7 H7 3OM sing 20 n n 
C7 H7A 3OM sing 21 n n 
C8 H8 3OM sing 22 n n 
C8 H8A 3OM sing 23 n n 
C8 H8B 3OM sing 24 n n 
#
_atom_sites.entry_id                     1GT3 
_atom_sites.fract_transf_matrix[1][1]    0.017989 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002631 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015336 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023975 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 DHM A 1 1160 1160 DHM DHM . 
D 3 3OM A 1 1161 1161 3OM 3OM . 
E 3 3OM B 1 1158 1158 3OM 3OM . 
F 2 DHM B 1 1159 1159 DHM DHM . 
G 4 HOH A 1 2001 2001 HOH HOH . 
G 4 HOH A 2 2002 2002 HOH HOH . 
G 4 HOH A 3 2003 2003 HOH HOH . 
G 4 HOH A 4 2004 2004 HOH HOH . 
G 4 HOH A 5 2005 2005 HOH HOH . 
G 4 HOH A 6 2006 2006 HOH HOH . 
G 4 HOH A 7 2007 2007 HOH HOH . 
G 4 HOH A 8 2008 2008 HOH HOH . 
G 4 HOH A 9 2009 2009 HOH HOH . 
G 4 HOH A 10 2010 2010 HOH HOH . 
G 4 HOH A 11 2011 2011 HOH HOH . 
G 4 HOH A 12 2012 2012 HOH HOH . 
G 4 HOH A 13 2013 2013 HOH HOH . 
G 4 HOH A 14 2014 2014 HOH HOH . 
G 4 HOH A 15 2015 2015 HOH HOH . 
G 4 HOH A 16 2016 2016 HOH HOH . 
G 4 HOH A 17 2017 2017 HOH HOH . 
G 4 HOH A 18 2018 2018 HOH HOH . 
G 4 HOH A 19 2019 2019 HOH HOH . 
G 4 HOH A 20 2020 2020 HOH HOH . 
G 4 HOH A 21 2021 2021 HOH HOH . 
G 4 HOH A 22 2022 2022 HOH HOH . 
G 4 HOH A 23 2023 2023 HOH HOH . 
G 4 HOH A 24 2024 2024 HOH HOH . 
G 4 HOH A 25 2025 2025 HOH HOH . 
G 4 HOH A 26 2026 2026 HOH HOH . 
G 4 HOH A 27 2027 2027 HOH HOH . 
G 4 HOH A 28 2028 2028 HOH HOH . 
G 4 HOH A 29 2029 2029 HOH HOH . 
G 4 HOH A 30 2030 2030 HOH HOH . 
G 4 HOH A 31 2031 2031 HOH HOH . 
G 4 HOH A 32 2032 2032 HOH HOH . 
G 4 HOH A 33 2033 2033 HOH HOH . 
G 4 HOH A 34 2034 2034 HOH HOH . 
G 4 HOH A 35 2035 2035 HOH HOH . 
G 4 HOH A 36 2036 2036 HOH HOH . 
G 4 HOH A 37 2037 2037 HOH HOH . 
G 4 HOH A 38 2038 2038 HOH HOH . 
G 4 HOH A 39 2039 2039 HOH HOH . 
G 4 HOH A 40 2040 2040 HOH HOH . 
G 4 HOH A 41 2041 2041 HOH HOH . 
G 4 HOH A 42 2042 2042 HOH HOH . 
G 4 HOH A 43 2043 2043 HOH HOH . 
G 4 HOH A 44 2044 2044 HOH HOH . 
G 4 HOH A 45 2045 2045 HOH HOH . 
G 4 HOH A 46 2046 2046 HOH HOH . 
G 4 HOH A 47 2047 2047 HOH HOH . 
G 4 HOH A 48 2048 2048 HOH HOH . 
G 4 HOH A 49 2049 2049 HOH HOH . 
G 4 HOH A 50 2050 2050 HOH HOH . 
G 4 HOH A 51 2051 2051 HOH HOH . 
G 4 HOH A 52 2052 2052 HOH HOH . 
G 4 HOH A 53 2053 2053 HOH HOH . 
G 4 HOH A 54 2054 2054 HOH HOH . 
G 4 HOH A 55 2055 2055 HOH HOH . 
G 4 HOH A 56 2056 2056 HOH HOH . 
G 4 HOH A 57 2057 2057 HOH HOH . 
G 4 HOH A 58 2058 2058 HOH HOH . 
G 4 HOH A 59 2059 2059 HOH HOH . 
G 4 HOH A 60 2060 2060 HOH HOH . 
G 4 HOH A 61 2061 2061 HOH HOH . 
G 4 HOH A 62 2062 2062 HOH HOH . 
G 4 HOH A 63 2063 2063 HOH HOH . 
G 4 HOH A 64 2064 2064 HOH HOH . 
G 4 HOH A 65 2065 2065 HOH HOH . 
G 4 HOH A 66 2066 2066 HOH HOH . 
G 4 HOH A 67 2067 2067 HOH HOH . 
G 4 HOH A 68 2068 2068 HOH HOH . 
G 4 HOH A 69 2069 2069 HOH HOH . 
G 4 HOH A 70 2070 2070 HOH HOH . 
G 4 HOH A 71 2071 2071 HOH HOH . 
H 4 HOH B 1 2001 2001 HOH HOH . 
H 4 HOH B 2 2002 2002 HOH HOH . 
H 4 HOH B 3 2003 2003 HOH HOH . 
H 4 HOH B 4 2004 2004 HOH HOH . 
H 4 HOH B 5 2005 2005 HOH HOH . 
H 4 HOH B 6 2006 2006 HOH HOH . 
H 4 HOH B 7 2007 2007 HOH HOH . 
H 4 HOH B 8 2008 2008 HOH HOH . 
H 4 HOH B 9 2009 2009 HOH HOH . 
H 4 HOH B 10 2010 2010 HOH HOH . 
H 4 HOH B 11 2011 2011 HOH HOH . 
H 4 HOH B 12 2012 2012 HOH HOH . 
H 4 HOH B 13 2013 2013 HOH HOH . 
H 4 HOH B 14 2014 2014 HOH HOH . 
H 4 HOH B 15 2015 2015 HOH HOH . 
H 4 HOH B 16 2016 2016 HOH HOH . 
H 4 HOH B 17 2017 2017 HOH HOH . 
H 4 HOH B 18 2018 2018 HOH HOH . 
H 4 HOH B 19 2019 2019 HOH HOH . 
H 4 HOH B 20 2020 2020 HOH HOH . 
H 4 HOH B 21 2021 2021 HOH HOH . 
H 4 HOH B 22 2022 2022 HOH HOH . 
H 4 HOH B 23 2023 2023 HOH HOH . 
H 4 HOH B 24 2024 2024 HOH HOH . 
H 4 HOH B 25 2025 2025 HOH HOH . 
H 4 HOH B 26 2026 2026 HOH HOH . 
H 4 HOH B 27 2027 2027 HOH HOH . 
H 4 HOH B 28 2028 2028 HOH HOH . 
H 4 HOH B 29 2029 2029 HOH HOH . 
H 4 HOH B 30 2030 2030 HOH HOH . 
H 4 HOH B 31 2031 2031 HOH HOH . 
H 4 HOH B 32 2032 2032 HOH HOH . 
H 4 HOH B 33 2033 2033 HOH HOH . 
H 4 HOH B 34 2034 2034 HOH HOH . 
H 4 HOH B 35 2035 2035 HOH HOH . 
H 4 HOH B 36 2036 2036 HOH HOH . 
H 4 HOH B 37 2037 2037 HOH HOH . 
H 4 HOH B 38 2038 2038 HOH HOH . 
H 4 HOH B 39 2039 2039 HOH HOH . 
H 4 HOH B 40 2040 2040 HOH HOH . 
H 4 HOH B 41 2041 2041 HOH HOH . 
H 4 HOH B 42 2042 2042 HOH HOH . 
H 4 HOH B 43 2043 2043 HOH HOH . 
H 4 HOH B 44 2044 2044 HOH HOH . 
H 4 HOH B 45 2045 2045 HOH HOH . 
H 4 HOH B 46 2046 2046 HOH HOH . 
H 4 HOH B 47 2047 2047 HOH HOH . 
H 4 HOH B 48 2048 2048 HOH HOH . 
H 4 HOH B 49 2049 2049 HOH HOH . 
H 4 HOH B 50 2050 2050 HOH HOH . 
H 4 HOH B 51 2051 2051 HOH HOH . 
H 4 HOH B 52 2052 2052 HOH HOH . 
H 4 HOH B 53 2053 2053 HOH HOH . 
H 4 HOH B 54 2054 2054 HOH HOH . 
H 4 HOH B 55 2055 2055 HOH HOH . 
H 4 HOH B 56 2056 2056 HOH HOH . 
H 4 HOH B 57 2057 2057 HOH HOH . 
H 4 HOH B 58 2058 2058 HOH HOH . 
H 4 HOH B 59 2059 2059 HOH HOH . 
H 4 HOH B 60 2060 2060 HOH HOH . 
H 4 HOH B 61 2061 2061 HOH HOH . 
H 4 HOH B 62 2062 2062 HOH HOH . 
H 4 HOH B 63 2063 2063 HOH HOH . 
H 4 HOH B 64 2064 2064 HOH HOH . 
H 4 HOH B 65 2065 2065 HOH HOH . 
H 4 HOH B 66 2066 2066 HOH HOH . 
H 4 HOH B 67 2067 2067 HOH HOH . 
H 4 HOH B 68 2068 2068 HOH HOH . 
H 4 HOH B 69 2069 2069 HOH HOH . 
H 4 HOH B 70 2070 2070 HOH HOH . 
H 4 HOH B 71 2071 2071 HOH HOH . 
H 4 HOH B 72 2072 2072 HOH HOH . 
H 4 HOH B 73 2073 2073 HOH HOH . 
H 4 HOH B 74 2074 2074 HOH HOH . 
H 4 HOH B 75 2075 2075 HOH HOH . 
H 4 HOH B 76 2076 2076 HOH HOH . 
H 4 HOH B 77 2077 2077 HOH HOH . 
H 4 HOH B 78 2078 2078 HOH HOH . 
H 4 HOH B 79 2079 2079 HOH HOH . 
H 4 HOH B 80 2080 2080 HOH HOH . 
H 4 HOH B 81 2081 2081 HOH HOH . 
H 4 HOH B 82 2082 2082 HOH HOH . 
H 4 HOH B 83 2083 2083 HOH HOH . 
H 4 HOH B 84 2084 2084 HOH HOH . 
H 4 HOH B 85 2085 2085 HOH HOH . 
H 4 HOH B 86 2086 2086 HOH HOH . 
H 4 HOH B 87 2087 2087 HOH HOH . 
H 4 HOH B 88 2088 2088 HOH HOH . 
H 4 HOH B 89 2089 2089 HOH HOH . 
H 4 HOH B 90 2090 2090 HOH HOH . 
H 4 HOH B 91 2091 2091 HOH HOH . 
H 4 HOH B 92 2092 2092 HOH HOH . 
H 4 HOH B 93 2093 2093 HOH HOH . 
H 4 HOH B 94 2094 2094 HOH HOH . 
H 4 HOH B 95 2095 2095 HOH HOH . 
H 4 HOH B 96 2096 2096 HOH HOH . 
H 4 HOH B 97 2097 2097 HOH HOH . 
H 4 HOH B 98 2098 2098 HOH HOH . 
H 4 HOH B 99 2099 2099 HOH HOH . 
H 4 HOH B 100 2100 2100 HOH HOH . 
H 4 HOH B 101 2101 2101 HOH HOH . 
H 4 HOH B 102 2102 2102 HOH HOH . 
H 4 HOH B 103 2103 2103 HOH HOH . 
H 4 HOH B 104 2104 2104 HOH HOH . 
H 4 HOH B 105 2105 2105 HOH HOH . 
H 4 HOH B 106 2106 2106 HOH HOH . 
H 4 HOH B 107 2107 2107 HOH HOH . 
H 4 HOH B 108 2108 2108 HOH HOH . 
H 4 HOH B 109 2109 2109 HOH HOH . 
H 4 HOH B 110 2110 2110 HOH HOH . 
H 4 HOH B 111 2111 2111 HOH HOH . 
H 4 HOH B 112 2112 2112 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 3OM . A . D 3 -1.523 0.916 3.001 0.2 53.46 ? C1 3OM 1161 A 1 
HETATM 2 C C1 3OM . B . D 3 -2.231 -0.649 3.474 0.2 55.71 ? C1 3OM 1161 A 1 
HETATM 3 O O1 3OM . A . D 3 1.808 0.736 4.841 0.2 53.17 ? O1 3OM 1161 A 1 
HETATM 4 O O1 3OM . B . D 3 0.851 1.342 3.573 0.2 55.65 ? O1 3OM 1161 A 1 
HETATM 5 C C2 3OM . A . D 3 -0.217 1.13 3.59 0.2 53.39 ? C2 3OM 1161 A 1 
HETATM 6 C C2 3OM . B . D 3 -1.337 0.451 3.31 0.2 55.52 ? C2 3OM 1161 A 1 
HETATM 7 C C3 3OM . A . D 3 0.485 0.133 4.432 0.2 53.16 ? C3 3OM 1161 A 1 
HETATM 8 C C3 3OM . B . D 3 -0.002 0.177 3.808 0.2 55.36 ? C3 3OM 1161 A 1 
HETATM 9 C C4 3OM . A . D 3 -0.269 -0.294 5.652 0.2 53.06 ? C4 3OM 1161 A 1 
HETATM 10 C C4 3OM . B . D 3 -0.044 -0.108 5.284 0.2 55.4 ? C4 3OM 1161 A 1 
HETATM 11 C C5 3OM . A . D 3 0.501 -1.257 6.501 0.2 52.72 ? C5 3OM 1161 A 1 
HETATM 12 C C5 3OM . B . D 3 0.947 -1.164 5.727 0.2 55.16 ? C5 3OM 1161 A 1 
HETATM 13 C C6 3OM . A . D 3 -0.327 -1.521 7.717 0.2 52.13 ? C6 3OM 1161 A 1 
HETATM 14 C C6 3OM . B . D 3 0.802 -1.332 7.261 0.2 55.01 ? C6 3OM 1161 A 1 
HETATM 15 C C7 3OM . A . D 3 0.304 -2.437 8.724 0.2 51.7 ? C7 3OM 1161 A 1 
HETATM 16 C C7 3OM . B . D 3 1.715 -2.345 7.904 0.2 55 ? C7 3OM 1161 A 1 
HETATM 17 C C8 3OM . A . D 3 -0.584 -2.585 9.921 0.2 51.62 ? C8 3OM 1161 A 1 
HETATM 18 C C8 3OM . B . D 3 1.449 -2.369 9.364 0.2 54.91 ? C8 3OM 1161 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           18 
#