data_1GTB # _model_server_result.job_id udNMpo-sO70GYpYhLbE8GQ _model_server_result.datetime_utc '2024-11-24 08:30:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gtb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 1GTB # _exptl.entry_id 1GTB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 312.406 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PRAZIQUANTEL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1GTB _cell.length_a 123.8 _cell.length_b 123.8 _cell.length_c 70.2 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GTB _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 70.2 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H24 N2 O2' _chem_comp.formula_weight 312.406 _chem_comp.id PZQ _chem_comp.mon_nstd_flag . _chem_comp.name PRAZIQUANTEL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C4 PZQ sing 277 n n C1 N1 PZQ sing 278 n n C1 O1 PZQ doub 279 n n C2 C3 PZQ sing 280 n n C2 C13 PZQ sing 281 n n C2 H21 PZQ sing 282 n n C2 H22 PZQ sing 283 n n C3 C4 PZQ sing 284 n n C3 H31 PZQ sing 285 n n C3 H32 PZQ sing 286 n n C4 C5 PZQ sing 287 n n C4 H4 PZQ sing 288 n n C5 C6 PZQ sing 289 n n C5 H51 PZQ sing 290 n n C5 H52 PZQ sing 291 n n C6 C13 PZQ sing 292 n n C6 H61 PZQ sing 293 n n C6 H62 PZQ sing 294 n n C7 C8 PZQ doub 295 n y C7 C19 PZQ sing 296 n y C7 H7 PZQ sing 297 n n C8 C12 PZQ sing 298 n y C8 H8 PZQ sing 299 n n C9 C10 PZQ sing 300 n n C9 C12 PZQ sing 301 n n C9 H91 PZQ sing 302 n n C9 H92 PZQ sing 303 n n C10 N2 PZQ sing 304 n n C10 H101 PZQ sing 305 n n C10 H102 PZQ sing 306 n n C11 C12 PZQ doub 307 n y C11 C17 PZQ sing 308 n n C11 C18 PZQ sing 309 n y C13 H131 PZQ sing 310 n n C13 H132 PZQ sing 311 n n C14 C15 PZQ sing 312 n n C14 N2 PZQ sing 313 n n C14 O2 PZQ doub 314 n n C15 N1 PZQ sing 315 n n C15 H151 PZQ sing 316 n n C15 H152 PZQ sing 317 n n C16 C17 PZQ sing 318 n n C16 N1 PZQ sing 319 n n C16 H161 PZQ sing 320 n n C16 H162 PZQ sing 321 n n C17 N2 PZQ sing 322 n n C17 H17 PZQ sing 323 n n C18 C19 PZQ doub 324 n y C18 H18 PZQ sing 325 n n C19 H19 PZQ sing 326 n n # _atom_sites.entry_id 1GTB _atom_sites.fract_transf_matrix[1][1] 0.008078 _atom_sites.fract_transf_matrix[1][2] 0.004664 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009327 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014245 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PZQ A 1 901 901 PZQ PZQ . C 3 HOH A 1 301 301 HOH HOH . C 3 HOH A 2 302 302 HOH HOH . C 3 HOH A 3 303 303 HOH HOH . C 3 HOH A 4 304 304 HOH HOH . C 3 HOH A 5 305 305 HOH HOH . C 3 HOH A 6 306 306 HOH HOH . C 3 HOH A 7 307 307 HOH HOH . C 3 HOH A 8 308 308 HOH HOH . C 3 HOH A 9 309 309 HOH HOH . C 3 HOH A 10 310 310 HOH HOH . C 3 HOH A 11 311 311 HOH HOH . C 3 HOH A 12 312 312 HOH HOH . C 3 HOH A 13 314 314 HOH HOH . C 3 HOH A 14 315 315 HOH HOH . C 3 HOH A 15 316 316 HOH HOH . C 3 HOH A 16 317 317 HOH HOH . C 3 HOH A 17 318 318 HOH HOH . C 3 HOH A 18 319 319 HOH HOH . C 3 HOH A 19 320 320 HOH HOH . C 3 HOH A 20 321 321 HOH HOH . C 3 HOH A 21 322 322 HOH HOH . C 3 HOH A 22 323 323 HOH HOH . C 3 HOH A 23 324 324 HOH HOH . C 3 HOH A 24 325 325 HOH HOH . C 3 HOH A 25 326 326 HOH HOH . C 3 HOH A 26 327 327 HOH HOH . C 3 HOH A 27 328 328 HOH HOH . C 3 HOH A 28 329 329 HOH HOH . C 3 HOH A 29 330 330 HOH HOH . C 3 HOH A 30 331 331 HOH HOH . C 3 HOH A 31 332 332 HOH HOH . C 3 HOH A 32 333 333 HOH HOH . C 3 HOH A 33 334 334 HOH HOH . C 3 HOH A 34 335 335 HOH HOH . C 3 HOH A 35 336 336 HOH HOH . C 3 HOH A 36 337 337 HOH HOH . C 3 HOH A 37 338 338 HOH HOH . C 3 HOH A 38 339 339 HOH HOH . C 3 HOH A 39 340 340 HOH HOH . C 3 HOH A 40 341 341 HOH HOH . C 3 HOH A 41 342 342 HOH HOH . C 3 HOH A 42 343 343 HOH HOH . C 3 HOH A 43 344 344 HOH HOH . C 3 HOH A 44 345 345 HOH HOH . C 3 HOH A 45 346 346 HOH HOH . C 3 HOH A 46 347 347 HOH HOH . C 3 HOH A 47 348 348 HOH HOH . C 3 HOH A 48 349 349 HOH HOH . C 3 HOH A 49 350 350 HOH HOH . C 3 HOH A 50 351 351 HOH HOH . C 3 HOH A 51 352 352 HOH HOH . C 3 HOH A 52 353 353 HOH HOH . C 3 HOH A 53 354 354 HOH HOH . C 3 HOH A 54 355 355 HOH HOH . C 3 HOH A 55 357 357 HOH HOH . C 3 HOH A 56 358 358 HOH HOH . C 3 HOH A 57 359 359 HOH HOH . C 3 HOH A 58 360 360 HOH HOH . C 3 HOH A 59 361 361 HOH HOH . C 3 HOH A 60 362 362 HOH HOH . C 3 HOH A 61 364 364 HOH HOH . C 3 HOH A 62 365 365 HOH HOH . C 3 HOH A 63 366 366 HOH HOH . C 3 HOH A 64 367 367 HOH HOH . C 3 HOH A 65 368 368 HOH HOH . C 3 HOH A 66 370 370 HOH HOH . C 3 HOH A 67 371 371 HOH HOH . C 3 HOH A 68 372 372 HOH HOH . C 3 HOH A 69 373 373 HOH HOH . C 3 HOH A 70 374 374 HOH HOH . C 3 HOH A 71 375 375 HOH HOH . C 3 HOH A 72 376 376 HOH HOH . C 3 HOH A 73 377 377 HOH HOH . C 3 HOH A 74 378 378 HOH HOH . C 3 HOH A 75 379 379 HOH HOH . C 3 HOH A 76 380 380 HOH HOH . C 3 HOH A 77 381 381 HOH HOH . C 3 HOH A 78 382 382 HOH HOH . C 3 HOH A 79 383 383 HOH HOH . C 3 HOH A 80 384 384 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PZQ . . . B 2 25.297 43.063 38.595 0.5 46.55 ? C1 PZQ 901 A 1 HETATM 2 C C2 PZQ . . . B 2 22.9 40.569 40.48 0.5 47.85 ? C2 PZQ 901 A 1 HETATM 3 C C3 PZQ . . . B 2 23.618 41.904 40.162 0.5 46.37 ? C3 PZQ 901 A 1 HETATM 4 C C4 PZQ . . . B 2 24.469 41.803 38.861 0.5 46.47 ? C4 PZQ 901 A 1 HETATM 5 C C5 PZQ . . . B 2 23.658 41.255 37.658 0.5 45.87 ? C5 PZQ 901 A 1 HETATM 6 C C6 PZQ . . . B 2 22.956 39.916 38.011 0.5 47.08 ? C6 PZQ 901 A 1 HETATM 7 C C7 PZQ . . . B 2 26.883 43.611 31.176 0.5 47.83 ? C7 PZQ 901 A 1 HETATM 8 C C8 PZQ . . . B 2 26.505 44.866 31.578 0.5 47.34 ? C8 PZQ 901 A 1 HETATM 9 C C9 PZQ . . . B 2 25.979 46.591 33.332 0.5 46.04 ? C9 PZQ 901 A 1 HETATM 10 C C10 PZQ . . . B 2 26.407 46.85 34.759 0.5 46.8 ? C10 PZQ 901 A 1 HETATM 11 C C11 PZQ . . . B 2 26.53 44.202 33.877 0.5 47.94 ? C11 PZQ 901 A 1 HETATM 12 C C12 PZQ . . . B 2 26.331 45.191 32.921 0.5 47.32 ? C12 PZQ 901 A 1 HETATM 13 C C13 PZQ . . . B 2 22.083 40.045 39.279 0.5 47.08 ? C13 PZQ 901 A 1 HETATM 14 C C14 PZQ . . . B 2 25.113 46.153 36.697 0.5 48 ? C14 PZQ 901 A 1 HETATM 15 C C15 PZQ . . . B 2 24.621 45.077 37.612 0.5 48.16 ? C15 PZQ 901 A 1 HETATM 16 C C16 PZQ . . . B 2 25.436 43.445 36.016 0.5 47.17 ? C16 PZQ 901 A 1 HETATM 17 C C17 PZQ . . . B 2 26.361 44.46 35.374 0.5 47.42 ? C17 PZQ 901 A 1 HETATM 18 C C18 PZQ . . . B 2 26.942 42.937 33.463 0.5 48.96 ? C18 PZQ 901 A 1 HETATM 19 C C19 PZQ . . . B 2 27.108 42.644 32.133 0.5 48.51 ? C19 PZQ 901 A 1 HETATM 20 N N1 PZQ . . . B 2 25.3 43.82 37.44 0.5 47.52 ? N1 PZQ 901 A 1 HETATM 21 N N2 PZQ . . . B 2 25.867 45.814 35.627 0.5 47.07 ? N2 PZQ 901 A 1 HETATM 22 O O1 PZQ . . . B 2 25.992 43.413 39.556 0.5 47.83 ? O1 PZQ 901 A 1 HETATM 23 O O2 PZQ . . . B 2 24.79 47.312 36.943 0.5 47.23 ? O2 PZQ 901 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #