data_1GTI # _model_server_result.job_id mUM3cSaNty75p1anQGm-eQ _model_server_result.datetime_utc '2024-10-22 23:24:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gti # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":210}' # _entry.id 1GTI # _exptl.entry_id 1GTI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 442.444 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-(P-NITROBENZYL)GLUTATHIONE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GTI _cell.length_a 62.45 _cell.length_b 132.69 _cell.length_c 214.47 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GTI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression C,D,I,J 1 1 A,B,G,H 2 1 E,F,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 46 A THR 46 1_555 A N CCS 47 A CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C CCS 47 A CCS 47 1_555 A N LEU 48 A LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C THR 46 B THR 46 1_555 B N CCS 47 B CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C CCS 47 B CCS 47 1_555 B N LEU 48 B LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 C C THR 46 C THR 46 1_555 C N CCS 47 C CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 C C CCS 47 C CCS 47 1_555 C N LEU 48 C LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 D C THR 46 D THR 46 1_555 D N CCS 47 D CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale8 D C CCS 47 D CCS 47 1_555 D N LEU 48 D LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale9 E C THR 46 E THR 46 1_555 E N CCS 47 E CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 E C CCS 47 E CCS 47 1_555 E N LEU 48 E LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale11 F C THR 46 F THR 46 1_555 F N CCS 47 F CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale12 F C CCS 47 F CCS 47 1_555 F N LEU 48 F LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C17 H22 N4 O8 S' _chem_comp.formula_weight 442.444 _chem_comp.id GTB _chem_comp.mon_nstd_flag . _chem_comp.name S-(P-NITROBENZYL)GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1GTI _atom_sites.fract_transf_matrix[1][1] 0.016013 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007536 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004663 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 GTB A 1 210 1 GTB GTB . H 2 GTB B 1 210 1 GTB GTB . I 2 GTB C 1 210 1 GTB GTB . J 2 GTB D 1 210 1 GTB GTB . K 2 GTB E 1 210 1 GTB GTB . L 2 GTB F 1 210 1 GTB GTB . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GTB . . . J 2 17.076 65.901 -0.946 1 7.25 ? N1 GTB 210 D 1 HETATM 2 C CA1 GTB . . . J 2 18.488 65.554 -0.84 1 8.58 ? CA1 GTB 210 D 1 HETATM 3 C C1 GTB . . . J 2 18.873 64.185 -1.399 1 8.31 ? C1 GTB 210 D 1 HETATM 4 O O11 GTB . . . J 2 18.058 63.25 -1.261 1 17.26 ? O11 GTB 210 D 1 HETATM 5 O O12 GTB . . . J 2 19.975 64.059 -1.976 1 2 ? O12 GTB 210 D 1 HETATM 6 C CB1 GTB . . . J 2 19.081 65.689 0.57 1 13.23 ? CB1 GTB 210 D 1 HETATM 7 C CG1 GTB . . . J 2 20.587 65.446 0.657 1 15.41 ? CG1 GTB 210 D 1 HETATM 8 C CD1 GTB . . . J 2 21.116 65.447 2.08 1 13.8 ? CD1 GTB 210 D 1 HETATM 9 O OE1 GTB . . . J 2 20.384 65.173 3.035 1 17.88 ? OE1 GTB 210 D 1 HETATM 10 N N2 GTB . . . J 2 22.401 65.764 2.213 1 10.01 ? N2 GTB 210 D 1 HETATM 11 C CA2 GTB . . . J 2 23.058 65.802 3.516 1 16.7 ? CA2 GTB 210 D 1 HETATM 12 C C2 GTB . . . J 2 24.158 66.86 3.589 1 16.77 ? C2 GTB 210 D 1 HETATM 13 O O2 GTB . . . J 2 24.819 67.156 2.588 1 16.37 ? O2 GTB 210 D 1 HETATM 14 C CB2 GTB . . . J 2 23.645 64.43 3.86 1 13.83 ? CB2 GTB 210 D 1 HETATM 15 S SG2 GTB . . . J 2 22.427 63.151 4.316 1 28.14 ? SG2 GTB 210 D 1 HETATM 16 N N3 GTB . . . J 2 24.359 67.399 4.787 1 16.32 ? N3 GTB 210 D 1 HETATM 17 C CA3 GTB . . . J 2 25.376 68.415 4.996 1 12.82 ? CA3 GTB 210 D 1 HETATM 18 C C3 GTB . . . J 2 24.929 69.801 4.573 1 14.92 ? C3 GTB 210 D 1 HETATM 19 O O31 GTB . . . J 2 25.804 70.628 4.239 1 20.48 ? O31 GTB 210 D 1 HETATM 20 O O32 GTB . . . J 2 23.706 70.061 4.577 1 13.54 ? O32 GTB 210 D 1 HETATM 21 C C' GTB . . . J 2 22.354 63.322 6.125 1 18.6 ? C' GTB 210 D 1 HETATM 22 C C1' GTB . . . J 2 23.699 63.358 6.831 1 13.62 ? C1' GTB 210 D 1 HETATM 23 C C2' GTB . . . J 2 24.373 64.574 7.055 1 11 ? C2' GTB 210 D 1 HETATM 24 C C3' GTB . . . J 2 25.641 64.608 7.625 1 8.4 ? C3' GTB 210 D 1 HETATM 25 C C4' GTB . . . J 2 26.279 63.418 7.987 1 14.29 ? C4' GTB 210 D 1 HETATM 26 N N41 GTB . . . J 2 27.67 63.46 8.561 1 18.51 ? N41 GTB 210 D 1 HETATM 27 O O41 GTB . . . J 2 28.259 62.444 8.855 1 20.76 ? O41 GTB 210 D 1 HETATM 28 O O42 GTB . . . J 2 28.217 64.524 8.702 1 20.95 ? O42 GTB 210 D 1 HETATM 29 C C5' GTB . . . J 2 25.628 62.2 7.777 1 12.78 ? C5' GTB 210 D 1 HETATM 30 C C6' GTB . . . J 2 24.358 62.173 7.205 1 9.34 ? C6' GTB 210 D 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 30 #