data_1GTI # _model_server_result.job_id pO6a8KsZf8cHo_JxdSHtKQ _model_server_result.datetime_utc '2024-11-29 09:45:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gti # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":210}' # _entry.id 1GTI # _exptl.entry_id 1GTI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 442.444 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-(P-NITROBENZYL)GLUTATHIONE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GTI _cell.length_a 62.45 _cell.length_b 132.69 _cell.length_c 214.47 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GTI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression C,D,I,J 1 1 A,B,G,H 2 1 E,F,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 46 A THR 46 1_555 A N CCS 47 A CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C CCS 47 A CCS 47 1_555 A N LEU 48 A LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C THR 46 B THR 46 1_555 B N CCS 47 B CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C CCS 47 B CCS 47 1_555 B N LEU 48 B LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 C C THR 46 C THR 46 1_555 C N CCS 47 C CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 C C CCS 47 C CCS 47 1_555 C N LEU 48 C LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 D C THR 46 D THR 46 1_555 D N CCS 47 D CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale8 D C CCS 47 D CCS 47 1_555 D N LEU 48 D LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale9 E C THR 46 E THR 46 1_555 E N CCS 47 E CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 E C CCS 47 E CCS 47 1_555 E N LEU 48 E LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale11 F C THR 46 F THR 46 1_555 F N CCS 47 F CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale12 F C CCS 47 F CCS 47 1_555 F N LEU 48 F LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C17 H22 N4 O8 S' _chem_comp.formula_weight 442.444 _chem_comp.id GTB _chem_comp.mon_nstd_flag . _chem_comp.name S-(P-NITROBENZYL)GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1GTI _atom_sites.fract_transf_matrix[1][1] 0.016013 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007536 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004663 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 GTB A 1 210 1 GTB GTB . H 2 GTB B 1 210 1 GTB GTB . I 2 GTB C 1 210 1 GTB GTB . J 2 GTB D 1 210 1 GTB GTB . K 2 GTB E 1 210 1 GTB GTB . L 2 GTB F 1 210 1 GTB GTB . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GTB . . . K 2 -4.318 84.962 34.986 1 13.97 ? N1 GTB 210 E 1 HETATM 2 C CA1 GTB . . . K 2 -5.416 84.037 34.737 1 6.57 ? CA1 GTB 210 E 1 HETATM 3 C C1 GTB . . . K 2 -5.917 83.992 33.297 1 2 ? C1 GTB 210 E 1 HETATM 4 O O11 GTB . . . K 2 -5.957 85.067 32.664 1 2 ? O11 GTB 210 E 1 HETATM 5 O O12 GTB . . . K 2 -6.253 82.892 32.815 1 2 ? O12 GTB 210 E 1 HETATM 6 C CB1 GTB . . . K 2 -6.627 84.202 35.667 1 3.52 ? CB1 GTB 210 E 1 HETATM 7 C CG1 GTB . . . K 2 -7.709 83.142 35.495 1 5.46 ? CG1 GTB 210 E 1 HETATM 8 C CD1 GTB . . . K 2 -8.934 83.405 36.343 1 2.87 ? CD1 GTB 210 E 1 HETATM 9 O OE1 GTB . . . K 2 -9.2 84.544 36.735 1 2 ? OE1 GTB 210 E 1 HETATM 10 N N2 GTB . . . K 2 -9.671 82.336 36.632 1 3.06 ? N2 GTB 210 E 1 HETATM 11 C CA2 GTB . . . K 2 -10.888 82.418 37.434 1 6.02 ? CA2 GTB 210 E 1 HETATM 12 C C2 GTB . . . K 2 -11.119 81.178 38.289 1 8.96 ? C2 GTB 210 E 1 HETATM 13 O O2 GTB . . . K 2 -10.754 80.067 37.901 1 11.39 ? O2 GTB 210 E 1 HETATM 14 C CB2 GTB . . . K 2 -12.105 82.635 36.537 1 2.45 ? CB2 GTB 210 E 1 HETATM 15 S SG2 GTB . . . K 2 -12.233 84.305 35.829 1 2 ? SG2 GTB 210 E 1 HETATM 16 N N3 GTB . . . K 2 -11.76 81.385 39.435 1 15.67 ? N3 GTB 210 E 1 HETATM 17 C CA3 GTB . . . K 2 -12.05 80.292 40.346 1 14.5 ? CA3 GTB 210 E 1 HETATM 18 C C3 GTB . . . K 2 -10.883 79.905 41.236 1 12.44 ? C3 GTB 210 E 1 HETATM 19 O O31 GTB . . . K 2 -10.841 78.73 41.654 1 12.78 ? O31 GTB 210 E 1 HETATM 20 O O32 GTB . . . K 2 -10.016 80.767 41.517 1 2 ? O32 GTB 210 E 1 HETATM 21 C C' GTB . . . K 2 -13.273 85.165 37.05 1 6.41 ? C' GTB 210 E 1 HETATM 22 C C1' GTB . . . K 2 -14.532 84.427 37.465 1 4.42 ? C1' GTB 210 E 1 HETATM 23 C C2' GTB . . . K 2 -14.526 83.529 38.544 1 8.61 ? C2' GTB 210 E 1 HETATM 24 C C3' GTB . . . K 2 -15.654 82.787 38.877 1 7.81 ? C3' GTB 210 E 1 HETATM 25 C C4' GTB . . . K 2 -16.828 82.924 38.134 1 8.13 ? C4' GTB 210 E 1 HETATM 26 N N41 GTB . . . K 2 -18.027 82.096 38.477 1 10.63 ? N41 GTB 210 E 1 HETATM 27 O O41 GTB . . . K 2 -19.05 82.172 37.842 1 18.2 ? O41 GTB 210 E 1 HETATM 28 O O42 GTB . . . K 2 -17.959 81.32 39.385 1 9.87 ? O42 GTB 210 E 1 HETATM 29 C C5' GTB . . . K 2 -16.857 83.812 37.059 1 6.34 ? C5' GTB 210 E 1 HETATM 30 C C6' GTB . . . K 2 -15.723 84.551 36.731 1 6 ? C6' GTB 210 E 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 30 #