data_1GTI # _model_server_result.job_id 6E8HooIFQgdJPziPqWHmRA _model_server_result.datetime_utc '2024-11-29 09:35:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gti # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":210}' # _entry.id 1GTI # _exptl.entry_id 1GTI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 442.444 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-(P-NITROBENZYL)GLUTATHIONE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GTI _cell.length_a 62.45 _cell.length_b 132.69 _cell.length_c 214.47 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GTI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression C,D,I,J 1 1 A,B,G,H 2 1 E,F,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 46 A THR 46 1_555 A N CCS 47 A CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C CCS 47 A CCS 47 1_555 A N LEU 48 A LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C THR 46 B THR 46 1_555 B N CCS 47 B CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C CCS 47 B CCS 47 1_555 B N LEU 48 B LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 C C THR 46 C THR 46 1_555 C N CCS 47 C CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 C C CCS 47 C CCS 47 1_555 C N LEU 48 C LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 D C THR 46 D THR 46 1_555 D N CCS 47 D CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale8 D C CCS 47 D CCS 47 1_555 D N LEU 48 D LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale9 E C THR 46 E THR 46 1_555 E N CCS 47 E CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 E C CCS 47 E CCS 47 1_555 E N LEU 48 E LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale11 F C THR 46 F THR 46 1_555 F N CCS 47 F CCS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale12 F C CCS 47 F CCS 47 1_555 F N LEU 48 F LEU 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C17 H22 N4 O8 S' _chem_comp.formula_weight 442.444 _chem_comp.id GTB _chem_comp.mon_nstd_flag . _chem_comp.name S-(P-NITROBENZYL)GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1GTI _atom_sites.fract_transf_matrix[1][1] 0.016013 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007536 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004663 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 GTB A 1 210 1 GTB GTB . H 2 GTB B 1 210 1 GTB GTB . I 2 GTB C 1 210 1 GTB GTB . J 2 GTB D 1 210 1 GTB GTB . K 2 GTB E 1 210 1 GTB GTB . L 2 GTB F 1 210 1 GTB GTB . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GTB . . . L 2 2.936 95.675 34.27 1 2 ? N1 GTB 210 F 1 HETATM 2 C CA1 GTB . . . L 2 4.1 96.549 34.367 1 3.6 ? CA1 GTB 210 F 1 HETATM 3 C C1 GTB . . . L 2 5.392 95.99 33.778 1 2 ? C1 GTB 210 F 1 HETATM 4 O O11 GTB . . . L 2 5.609 94.767 33.904 1 2 ? O11 GTB 210 F 1 HETATM 5 O O12 GTB . . . L 2 6.168 96.775 33.194 1 2 ? O12 GTB 210 F 1 HETATM 6 C CB1 GTB . . . L 2 4.4 97.083 35.778 1 10.35 ? CB1 GTB 210 F 1 HETATM 7 C CG1 GTB . . . L 2 5.547 98.091 35.853 1 12.57 ? CG1 GTB 210 F 1 HETATM 8 C CD1 GTB . . . L 2 5.922 98.473 37.272 1 11.5 ? CD1 GTB 210 F 1 HETATM 9 O OE1 GTB . . . L 2 5.689 97.718 38.219 1 16.67 ? OE1 GTB 210 F 1 HETATM 10 N N2 GTB . . . L 2 6.499 99.664 37.412 1 10.02 ? N2 GTB 210 F 1 HETATM 11 C CA2 GTB . . . L 2 6.924 100.177 38.712 1 10.08 ? CA2 GTB 210 F 1 HETATM 12 C C2 GTB . . . L 2 6.817 101.697 38.803 1 10.55 ? C2 GTB 210 F 1 HETATM 13 O O2 GTB . . . L 2 6.997 102.405 37.81 1 13.7 ? O2 GTB 210 F 1 HETATM 14 C CB2 GTB . . . L 2 8.365 99.754 39.013 1 6.37 ? CB2 GTB 210 F 1 HETATM 15 S SG2 GTB . . . L 2 8.601 97.994 39.427 1 9.37 ? SG2 GTB 210 F 1 HETATM 16 N N3 GTB . . . L 2 6.557 102.185 40.01 1 12.42 ? N3 GTB 210 F 1 HETATM 17 C CA3 GTB . . . L 2 6.433 103.615 40.227 1 9.6 ? CA3 GTB 210 F 1 HETATM 18 C C3 GTB . . . L 2 5.075 104.165 39.835 1 11.43 ? C3 GTB 210 F 1 HETATM 19 O O31 GTB . . . L 2 4.996 105.372 39.529 1 10.86 ? O31 GTB 210 F 1 HETATM 20 O O32 GTB . . . L 2 4.087 103.396 39.839 1 10.58 ? O32 GTB 210 F 1 HETATM 21 C C' GTB . . . L 2 8.452 98.021 41.244 1 15.46 ? C' GTB 210 F 1 HETATM 22 C C1' GTB . . . L 2 9.297 99.072 41.948 1 9.07 ? C1' GTB 210 F 1 HETATM 23 C C2' GTB . . . L 2 8.794 100.361 42.201 1 7.51 ? C2' GTB 210 F 1 HETATM 24 C C3' GTB . . . L 2 9.59 101.348 42.768 1 9.16 ? C3' GTB 210 F 1 HETATM 25 C C4' GTB . . . L 2 10.919 101.075 43.102 1 7.05 ? C4' GTB 210 F 1 HETATM 26 N N41 GTB . . . L 2 11.779 102.155 43.685 1 15.15 ? N41 GTB 210 F 1 HETATM 27 O O41 GTB . . . L 2 12.938 101.95 43.962 1 12.87 ? O41 GTB 210 F 1 HETATM 28 O O42 GTB . . . L 2 11.312 103.258 43.849 1 18.91 ? O42 GTB 210 F 1 HETATM 29 C C5' GTB . . . L 2 11.437 99.803 42.862 1 2 ? C5' GTB 210 F 1 HETATM 30 C C6' GTB . . . L 2 10.636 98.818 42.293 1 6.9 ? C6' GTB 210 F 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #