data_1GXF # _model_server_result.job_id eNZh6rMvd27GKXEgatFP0g _model_server_result.datetime_utc '2024-11-26 16:59:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1gxf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1502}' # _entry.id 1GXF # _exptl.entry_id 1GXF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 468.847 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'QUINACRINE MUSTARD' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1GXF _cell.length_a 93.1 _cell.length_b 93.1 _cell.length_c 156.6 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1GXF _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 53 A CYS 53 1_555 F C26 QUM . A QUM 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.791 ? covale ? covale2 A OE2 GLU 113 A GLU 113 1_555 E C28 QUM . A QUM 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale3 A OD2 ASP 117 A ASP 117 1_555 E C26 QUM . A QUM 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale4 B SG CYS 53 B CYS 53 1_555 I C26 QUM . B QUM 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.798 ? covale ? covale5 B OE2 GLU 113 B GLU 113 1_555 H C28 QUM . B QUM 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale6 B OD2 ASP 117 B ASP 117 1_555 H C26 QUM . B QUM 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? # _chem_comp.formula 'C23 H28 Cl3 N3 O' _chem_comp.formula_weight 468.847 _chem_comp.id QUM _chem_comp.mon_nstd_flag . _chem_comp.name 'QUINACRINE MUSTARD' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-{(1S)-4-[BIS(2-CHLOROETHYL)AMINO]-1-METHYLBUTYL}-N-(6-CHLORO-2-METHOXY-9-ACRIDINYL)AMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 QUM doub 379 n y C2 C1 QUM sing 380 n y C2 O15 QUM sing 381 n n C3 C4 QUM sing 382 n y C3 H3 QUM sing 383 n n C4 C11 QUM doub 384 n y C4 H4 QUM sing 385 n n C11 C12 QUM sing 386 n y C11 N10 QUM sing 387 n y C12 C1 QUM doub 388 n y C12 C9 QUM sing 389 n y C1 H1 QUM sing 390 n n N10 C14 QUM sing 391 n y N10 H10 QUM sing 392 n n C14 C13 QUM doub 393 n y C14 C5 QUM sing 394 n y C13 C9 QUM sing 395 n y C13 C8 QUM sing 396 n y C9 N18 QUM doub 397 z n C5 C6 QUM doub 398 n y C5 H5 QUM sing 399 n n C6 C7 QUM sing 400 n y C6 CL1 QUM sing 401 n n C7 C8 QUM doub 402 n y C7 H7 QUM sing 403 n n C8 H8 QUM sing 404 n n N18 C19 QUM sing 405 n n C19 C20 QUM sing 406 n n C19 C21 QUM sing 407 n n C19 H19 QUM sing 408 n n C20 H201 QUM sing 409 n n C20 H202 QUM sing 410 n n C20 H203 QUM sing 411 n n C21 C22 QUM sing 412 n n C21 H211 QUM sing 413 n n C21 H212 QUM sing 414 n n C22 C23 QUM sing 415 n n C22 H221 QUM sing 416 n n C22 H222 QUM sing 417 n n C23 N24 QUM sing 418 n n C23 H231 QUM sing 419 n n C23 H232 QUM sing 420 n n N24 C27 QUM sing 421 n n N24 C25 QUM sing 422 n n C27 C28 QUM sing 423 n n C27 H271 QUM sing 424 n n C27 H272 QUM sing 425 n n C25 C26 QUM sing 426 n n C25 H251 QUM sing 427 n n C25 H252 QUM sing 428 n n C28 CL3 QUM sing 429 n n C28 H281 QUM sing 430 n n C28 H282 QUM sing 431 n n C26 CL2 QUM sing 432 n n C26 H261 QUM sing 433 n n C26 H262 QUM sing 434 n n O15 C17 QUM sing 435 n n C17 H171 QUM sing 436 n n C17 H172 QUM sing 437 n n C17 H173 QUM sing 438 n n # _atom_sites.entry_id 1GXF _atom_sites.fract_transf_matrix[1][1] 0.010741 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010741 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006386 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 1492 1492 FAD FAD . D 3 MAE A 1 1500 1500 MAE MAE . E 4 QUM A 1 1501 1501 QUM QUM . F 4 QUM A 1 1502 1502 QUM QUM . G 2 FAD B 1 1492 1492 FAD FAD . H 4 QUM B 1 1501 1501 QUM QUM . I 4 QUM B 1 1502 1502 QUM QUM . J 5 HOH A 1 2001 2001 HOH HOH . J 5 HOH A 2 2002 2002 HOH HOH . J 5 HOH A 3 2003 2003 HOH HOH . J 5 HOH A 4 2004 2004 HOH HOH . J 5 HOH A 5 2005 2005 HOH HOH . J 5 HOH A 6 2006 2006 HOH HOH . J 5 HOH A 7 2007 2007 HOH HOH . J 5 HOH A 8 2008 2008 HOH HOH . J 5 HOH A 9 2009 2009 HOH HOH . J 5 HOH A 10 2010 2010 HOH HOH . J 5 HOH A 11 2011 2011 HOH HOH . J 5 HOH A 12 2012 2012 HOH HOH . J 5 HOH A 13 2013 2013 HOH HOH . J 5 HOH A 14 2014 2014 HOH HOH . J 5 HOH A 15 2015 2015 HOH HOH . J 5 HOH A 16 2016 2016 HOH HOH . J 5 HOH A 17 2017 2017 HOH HOH . J 5 HOH A 18 2018 2018 HOH HOH . J 5 HOH A 19 2019 2019 HOH HOH . J 5 HOH A 20 2020 2020 HOH HOH . J 5 HOH A 21 2021 2021 HOH HOH . J 5 HOH A 22 2022 2022 HOH HOH . J 5 HOH A 23 2023 2023 HOH HOH . J 5 HOH A 24 2024 2024 HOH HOH . J 5 HOH A 25 2025 2025 HOH HOH . J 5 HOH A 26 2026 2026 HOH HOH . J 5 HOH A 27 2027 2027 HOH HOH . J 5 HOH A 28 2028 2028 HOH HOH . K 5 HOH B 1 2001 2001 HOH HOH . K 5 HOH B 2 2002 2002 HOH HOH . K 5 HOH B 3 2003 2003 HOH HOH . K 5 HOH B 4 2004 2004 HOH HOH . K 5 HOH B 5 2005 2005 HOH HOH . K 5 HOH B 6 2006 2006 HOH HOH . K 5 HOH B 7 2007 2007 HOH HOH . K 5 HOH B 8 2008 2008 HOH HOH . K 5 HOH B 9 2009 2009 HOH HOH . K 5 HOH B 10 2010 2010 HOH HOH . K 5 HOH B 11 2011 2011 HOH HOH . K 5 HOH B 12 2012 2012 HOH HOH . K 5 HOH B 13 2013 2013 HOH HOH . K 5 HOH B 14 2014 2014 HOH HOH . K 5 HOH B 15 2015 2015 HOH HOH . K 5 HOH B 16 2016 2016 HOH HOH . K 5 HOH B 17 2017 2017 HOH HOH . K 5 HOH B 18 2018 2018 HOH HOH . K 5 HOH B 19 2019 2019 HOH HOH . K 5 HOH B 20 2020 2020 HOH HOH . K 5 HOH B 21 2021 2021 HOH HOH . K 5 HOH B 22 2022 2022 HOH HOH . K 5 HOH B 23 2023 2023 HOH HOH . K 5 HOH B 24 2024 2024 HOH HOH . K 5 HOH B 25 2025 2025 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 QUM . . . I 4 63.78 9.345 2.527 0.5 56.72 ? C2 QUM 1502 B 1 HETATM 2 C C3 QUM . . . I 4 63.833 9.012 1.156 0.5 56.27 ? C3 QUM 1502 B 1 HETATM 3 C C4 QUM . . . I 4 64.6 7.988 0.729 0.5 55.56 ? C4 QUM 1502 B 1 HETATM 4 C C11 QUM . . . I 4 65.365 7.24 1.654 0.5 55.79 ? C11 QUM 1502 B 1 HETATM 5 C C12 QUM . . . I 4 65.323 7.564 3.028 0.5 55.23 ? C12 QUM 1502 B 1 HETATM 6 C C1 QUM . . . I 4 64.502 8.646 3.443 0.5 55.71 ? C1 QUM 1502 B 1 HETATM 7 N N10 QUM . . . I 4 66.133 6.209 1.188 0.5 55.88 ? N10 QUM 1502 B 1 HETATM 8 C C14 QUM . . . I 4 66.897 5.44 2.003 0.5 56.33 ? C14 QUM 1502 B 1 HETATM 9 C C13 QUM . . . I 4 66.902 5.689 3.398 0.5 55.47 ? C13 QUM 1502 B 1 HETATM 10 C C9 QUM . . . I 4 66.124 6.77 3.919 0.5 54.61 ? C9 QUM 1502 B 1 HETATM 11 C C5 QUM . . . I 4 67.672 4.389 1.465 0.5 57.54 ? C5 QUM 1502 B 1 HETATM 12 C C6 QUM . . . I 4 68.435 3.629 2.305 0.5 58.06 ? C6 QUM 1502 B 1 HETATM 13 C C7 QUM . . . I 4 68.466 3.86 3.688 0.5 57.91 ? C7 QUM 1502 B 1 HETATM 14 C C8 QUM . . . I 4 67.731 4.866 4.219 0.5 56.73 ? C8 QUM 1502 B 1 HETATM 15 N N18 QUM . . . I 4 66.176 6.999 5.228 0.5 53.85 ? N18 QUM 1502 B 1 HETATM 16 C C19 QUM . . . I 4 65.635 7.942 6.145 0.5 52.63 ? C19 QUM 1502 B 1 HETATM 17 C C20 QUM . . . I 4 64.632 8.869 5.474 0.5 51.39 ? C20 QUM 1502 B 1 HETATM 18 C C21 QUM . . . I 4 64.939 7.059 7.22 0.5 52.39 ? C21 QUM 1502 B 1 HETATM 19 C C22 QUM . . . I 4 63.552 6.597 6.764 0.5 52.45 ? C22 QUM 1502 B 1 HETATM 20 C C23 QUM . . . I 4 63.339 5.131 6.479 0.5 52.32 ? C23 QUM 1502 B 1 HETATM 21 N N24 QUM . . . I 4 62.121 4.622 5.868 0.5 53.22 ? N24 QUM 1502 B 1 HETATM 22 C C27 QUM . . . I 4 61.317 5.753 5.241 0.5 55.73 ? C27 QUM 1502 B 1 HETATM 23 C C25 QUM . . . I 4 61.348 3.601 6.624 0.5 50.94 ? C25 QUM 1502 B 1 HETATM 24 C C28 QUM . . . I 4 61.373 5.839 3.799 0.5 57.16 ? C28 QUM 1502 B 1 HETATM 25 C C26 QUM . . . I 4 61.472 3.723 8.12 0.5 47.22 ? C26 QUM 1502 B 1 HETATM 26 CL CL1 QUM . . . I 4 69.398 2.355 1.643 0.5 58.55 ? CL1 QUM 1502 B 1 HETATM 27 O O15 QUM . . . I 4 62.949 10.408 2.819 0.5 57.52 ? O15 QUM 1502 B 1 HETATM 28 C C17 QUM . . . I 4 61.759 10.114 3.535 0.5 57.74 ? C17 QUM 1502 B 1 HETATM 29 CL CL3 QUM . . . I 4 62.939 5.158 3.227 0.5 57.48 ? CL3 QUM 1502 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #