data_1H1D # _model_server_result.job_id Wa3BXvrlgLgtHHPQDqw-bA _model_server_result.datetime_utc '2024-11-22 21:38:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1h1d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":335}' # _entry.id 1H1D # _exptl.entry_id 1H1D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 439.385 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-(3,4,DIHYDROXY-5-NITROPHENYL)-3-{4-[3-(TRIFLUOROMETHYL) PHENYL] PIPERAZIN-1-YL}PROPAN-1-ONE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1H1D _cell.length_a 51.49 _cell.length_b 51.49 _cell.length_c 168.29 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1H1D _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 141 A ASP 141 1_555 B MG MG . A MG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc2 A OD2 ASP 169 A ASP 169 1_555 B MG MG . A MG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc3 A OD1 ASN 170 A ASN 170 1_555 B MG MG . A MG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc4 B MG MG . A MG 300 1_555 D O5 BIA . A BIA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc5 B MG MG . A MG 300 1_555 D O9 BIA . A BIA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc6 B MG MG . A MG 300 1_555 E O HOH . A HOH 2053 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? # _chem_comp.formula 'C20 H20 F3 N3 O5' _chem_comp.formula_weight 439.385 _chem_comp.id BIA _chem_comp.mon_nstd_flag . _chem_comp.name '1-(3,4,DIHYDROXY-5-NITROPHENYL)-3-{4-[3-(TRIFLUOROMETHYL) PHENYL] PIPERAZIN-1-YL}PROPAN-1-ONE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'BIA 3-335' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 C21 BIA sing 70 n n N2 C25 BIA sing 71 n n N2 C31 BIA sing 72 n n C3 C7 BIA doub 73 n y C3 C11 BIA sing 74 n y C3 H3 BIA sing 75 n n C4 C10 BIA doub 76 n y C4 C31 BIA sing 77 n y C4 H4 BIA sing 78 n n O5 C32 BIA sing 79 n n O5 H5 BIA sing 80 n n C6 O8 BIA doub 81 n n C6 C11 BIA sing 82 n n C6 C22 BIA sing 83 n n C7 O9 BIA sing 84 n n C7 C32 BIA sing 85 n y O9 H9 BIA sing 86 n n C10 C37 BIA sing 87 n y C10 H10 BIA sing 88 n n C11 C19 BIA doub 89 n y C12 N23 BIA sing 90 n n C12 C25 BIA sing 91 n n C12 H121 BIA sing 92 n n C12 H122 BIA sing 93 n n N14 O17 BIA doub 94 n n N14 O18 BIA sing 95 n n N14 C28 BIA sing 96 n n C16 C21 BIA sing 97 n n C16 N23 BIA sing 98 n n C16 H161 BIA sing 99 n n C16 H162 BIA sing 100 n n C19 C28 BIA sing 101 n y C19 H19 BIA sing 102 n n C21 H211 BIA sing 103 n n C21 H212 BIA sing 104 n n C22 C27 BIA sing 105 n n C22 H221 BIA sing 106 n n C22 H222 BIA sing 107 n n N23 C27 BIA sing 108 n n C24 C26 BIA sing 109 n y C24 C33 BIA sing 110 n n C24 C37 BIA doub 111 n y C25 H251 BIA sing 112 n n C25 H252 BIA sing 113 n n C26 C31 BIA doub 114 n y C26 H26 BIA sing 115 n n C27 H271 BIA sing 116 n n C27 H272 BIA sing 117 n n C28 C32 BIA doub 118 n y C33 F37 BIA sing 119 n n C33 F38 BIA sing 120 n n C33 F39 BIA sing 121 n n C37 H37 BIA sing 122 n n # _atom_sites.entry_id 1H1D _atom_sites.fract_transf_matrix[1][1] 0.019421 _atom_sites.fract_transf_matrix[1][2] 0.011213 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022426 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005942 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 300 300 MG MG . C 3 SAM A 1 301 301 SAM SAM . D 4 BIA A 1 335 335 BIA BIA . E 5 HOH A 1 2001 2001 HOH HOH . E 5 HOH A 2 2002 2002 HOH HOH . E 5 HOH A 3 2003 2003 HOH HOH . E 5 HOH A 4 2004 2004 HOH HOH . E 5 HOH A 5 2005 2005 HOH HOH . E 5 HOH A 6 2006 2006 HOH HOH . E 5 HOH A 7 2007 2007 HOH HOH . E 5 HOH A 8 2008 2008 HOH HOH . E 5 HOH A 9 2009 2009 HOH HOH . E 5 HOH A 10 2010 2010 HOH HOH . E 5 HOH A 11 2011 2011 HOH HOH . E 5 HOH A 12 2012 2012 HOH HOH . E 5 HOH A 13 2013 2013 HOH HOH . E 5 HOH A 14 2014 2014 HOH HOH . E 5 HOH A 15 2015 2015 HOH HOH . E 5 HOH A 16 2016 2016 HOH HOH . E 5 HOH A 17 2017 2017 HOH HOH . E 5 HOH A 18 2018 2018 HOH HOH . E 5 HOH A 19 2019 2019 HOH HOH . E 5 HOH A 20 2020 2020 HOH HOH . E 5 HOH A 21 2021 2021 HOH HOH . E 5 HOH A 22 2022 2022 HOH HOH . E 5 HOH A 23 2023 2023 HOH HOH . E 5 HOH A 24 2024 2024 HOH HOH . E 5 HOH A 25 2025 2025 HOH HOH . E 5 HOH A 26 2026 2026 HOH HOH . E 5 HOH A 27 2027 2027 HOH HOH . E 5 HOH A 28 2028 2028 HOH HOH . E 5 HOH A 29 2029 2029 HOH HOH . E 5 HOH A 30 2030 2030 HOH HOH . E 5 HOH A 31 2031 2031 HOH HOH . E 5 HOH A 32 2032 2032 HOH HOH . E 5 HOH A 33 2033 2033 HOH HOH . E 5 HOH A 34 2034 2034 HOH HOH . E 5 HOH A 35 2035 2035 HOH HOH . E 5 HOH A 36 2036 2036 HOH HOH . E 5 HOH A 37 2037 2037 HOH HOH . E 5 HOH A 38 2038 2038 HOH HOH . E 5 HOH A 39 2039 2039 HOH HOH . E 5 HOH A 40 2040 2040 HOH HOH . E 5 HOH A 41 2041 2041 HOH HOH . E 5 HOH A 42 2042 2042 HOH HOH . E 5 HOH A 43 2043 2043 HOH HOH . E 5 HOH A 44 2044 2044 HOH HOH . E 5 HOH A 45 2045 2045 HOH HOH . E 5 HOH A 46 2046 2046 HOH HOH . E 5 HOH A 47 2047 2047 HOH HOH . E 5 HOH A 48 2048 2048 HOH HOH . E 5 HOH A 49 2049 2049 HOH HOH . E 5 HOH A 50 2050 2050 HOH HOH . E 5 HOH A 51 2051 2051 HOH HOH . E 5 HOH A 52 2052 2052 HOH HOH . E 5 HOH A 53 2053 2053 HOH HOH . E 5 HOH A 54 2054 2054 HOH HOH . E 5 HOH A 55 2055 2055 HOH HOH . E 5 HOH A 56 2056 2056 HOH HOH . E 5 HOH A 57 2057 2057 HOH HOH . E 5 HOH A 58 2058 2058 HOH HOH . E 5 HOH A 59 2059 2059 HOH HOH . E 5 HOH A 60 2060 2060 HOH HOH . E 5 HOH A 61 2061 2061 HOH HOH . E 5 HOH A 62 2062 2062 HOH HOH . E 5 HOH A 63 2063 2063 HOH HOH . E 5 HOH A 64 2064 2064 HOH HOH . E 5 HOH A 65 2065 2065 HOH HOH . E 5 HOH A 66 2066 2066 HOH HOH . E 5 HOH A 67 2067 2067 HOH HOH . E 5 HOH A 68 2068 2068 HOH HOH . E 5 HOH A 69 2069 2069 HOH HOH . E 5 HOH A 70 2070 2070 HOH HOH . E 5 HOH A 71 2071 2071 HOH HOH . E 5 HOH A 72 2072 2072 HOH HOH . E 5 HOH A 73 2073 2073 HOH HOH . E 5 HOH A 74 2074 2074 HOH HOH . E 5 HOH A 75 2075 2075 HOH HOH . E 5 HOH A 76 2076 2076 HOH HOH . E 5 HOH A 77 2077 2077 HOH HOH . E 5 HOH A 78 2078 2078 HOH HOH . E 5 HOH A 79 2079 2079 HOH HOH . E 5 HOH A 80 2080 2080 HOH HOH . E 5 HOH A 81 2081 2081 HOH HOH . E 5 HOH A 82 2082 2082 HOH HOH . E 5 HOH A 83 2083 2083 HOH HOH . E 5 HOH A 84 2084 2084 HOH HOH . E 5 HOH A 85 2085 2085 HOH HOH . E 5 HOH A 86 2086 2086 HOH HOH . E 5 HOH A 87 2087 2087 HOH HOH . E 5 HOH A 88 2088 2088 HOH HOH . E 5 HOH A 89 2089 2089 HOH HOH . E 5 HOH A 90 2090 2090 HOH HOH . E 5 HOH A 91 2091 2091 HOH HOH . E 5 HOH A 92 2092 2092 HOH HOH . E 5 HOH A 93 2093 2093 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N2 BIA . . . D 4 -32.131 57.656 52.804 1 52.61 ? N2 BIA 335 A 1 HETATM 2 C C3 BIA . . . D 4 -25.78 61.51 51.018 1 24.35 ? C3 BIA 335 A 1 HETATM 3 C C4 BIA . . . D 4 -34.188 57.824 51.329 1 57.01 ? C4 BIA 335 A 1 HETATM 4 O O5 BIA . . . D 4 -22.739 62.155 48.99 1 23.4 ? O5 BIA 335 A 1 HETATM 5 C C6 BIA . . . D 4 -26.798 59.482 52.03 1 30.21 ? C6 BIA 335 A 1 HETATM 6 C C7 BIA . . . D 4 -24.705 62.217 50.216 1 24.05 ? C7 BIA 335 A 1 HETATM 7 O O8 BIA . . . D 4 -27.551 60.198 52.686 1 31.84 ? O8 BIA 335 A 1 HETATM 8 O O9 BIA . . . D 4 -24.779 63.551 50.046 1 24.38 ? O9 BIA 335 A 1 HETATM 9 C C10 BIA . . . D 4 -35.575 57.648 51.183 1 58.47 ? C10 BIA 335 A 1 HETATM 10 C C11 BIA . . . D 4 -25.726 60.116 51.215 1 27.43 ? C11 BIA 335 A 1 HETATM 11 C C12 BIA . . . D 4 -30.14 56.835 53.969 1 48.63 ? C12 BIA 335 A 1 HETATM 12 N N14 BIA . . . D 4 -22.579 59.146 49.344 1 25.39 ? N14 BIA 335 A 1 HETATM 13 C C16 BIA . . . D 4 -29.944 58.319 51.997 1 47.88 ? C16 BIA 335 A 1 HETATM 14 O O17 BIA . . . D 4 -21.664 59.65 48.672 1 24.86 ? O17 BIA 335 A 1 HETATM 15 O O18 BIA . . . D 4 -22.615 57.954 49.554 1 27.31 ? O18 BIA 335 A 1 HETATM 16 C C19 BIA . . . D 4 -24.659 59.374 50.648 1 24.14 ? C19 BIA 335 A 1 HETATM 17 C C21 BIA . . . D 4 -31.339 57.978 51.587 1 50.17 ? C21 BIA 335 A 1 HETATM 18 C C22 BIA . . . D 4 -26.946 57.963 52.06 1 34.51 ? C22 BIA 335 A 1 HETATM 19 N N23 BIA . . . D 4 -29.29 57.189 52.791 1 46.21 ? N23 BIA 335 A 1 HETATM 20 C C24 BIA . . . D 4 -35.717 56.841 53.471 1 62.56 ? C24 BIA 335 A 1 HETATM 21 C C25 BIA . . . D 4 -31.519 56.495 53.513 1 50.79 ? C25 BIA 335 A 1 HETATM 22 C C26 BIA . . . D 4 -34.352 57.013 53.624 1 59.33 ? C26 BIA 335 A 1 HETATM 23 C C27 BIA . . . D 4 -27.89 57.576 53.191 1 40.53 ? C27 BIA 335 A 1 HETATM 24 C C28 BIA . . . D 4 -23.65 60.023 49.896 1 24.93 ? C28 BIA 335 A 1 HETATM 25 C C31 BIA . . . D 4 -33.529 57.503 52.58 1 55.77 ? C31 BIA 335 A 1 HETATM 26 C C32 BIA . . . D 4 -23.652 61.449 49.674 1 24.11 ? C32 BIA 335 A 1 HETATM 27 C C33 BIA . . . D 4 -36.484 56.307 54.66 1 64.55 ? C33 BIA 335 A 1 HETATM 28 F F37 BIA . . . D 4 -37.367 55.409 54.172 1 66.65 ? F37 BIA 335 A 1 HETATM 29 F F38 BIA . . . D 4 -35.748 55.647 55.477 1 65.3 ? F38 BIA 335 A 1 HETATM 30 F F39 BIA . . . D 4 -37.127 57.25 55.166 1 67.07 ? F39 BIA 335 A 1 HETATM 31 C C37 BIA . . . D 4 -36.366 57.153 52.247 1 60.56 ? C37 BIA 335 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #