data_1H1D
#
_model_server_result.job_id            g-obsc8I3El1XTErzv4JvA 
_model_server_result.datetime_utc      '2024-11-14 04:09:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1h1d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":335}' 
#
_entry.id    1H1D 
#
_exptl.entry_id    1H1D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              439.385 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1-(3,4,DIHYDROXY-5-NITROPHENYL)-3-{4-[3-(TRIFLUOROMETHYL) PHENYL] PIPERAZIN-1-YL}PROPAN-1-ONE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1H1D 
_cell.length_a            51.49 
_cell.length_b            51.49 
_cell.length_c            168.29 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1H1D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 141 A ASP 141 1_555 B MG MG . A MG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
metalc ? metalc2 A OD2 ASP 169 A ASP 169 1_555 B MG MG . A MG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
metalc ? metalc3 A OD1 ASN 170 A ASN 170 1_555 B MG MG . A MG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? 
metalc ? metalc4 B MG MG . A MG 300 1_555 D O5 BIA . A BIA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc5 B MG MG . A MG 300 1_555 D O9 BIA . A BIA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
metalc ? metalc6 B MG MG . A MG 300 1_555 E O HOH . A HOH 2053 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
#
_chem_comp.formula           'C20 H20 F3 N3 O5' 
_chem_comp.formula_weight    439.385 
_chem_comp.id                BIA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1-(3,4,DIHYDROXY-5-NITROPHENYL)-3-{4-[3-(TRIFLUOROMETHYL) PHENYL] PIPERAZIN-1-YL}PROPAN-1-ONE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'BIA 3-335' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N2 C21 BIA sing 70 n n 
N2 C25 BIA sing 71 n n 
N2 C31 BIA sing 72 n n 
C3 C7 BIA doub 73 n y 
C3 C11 BIA sing 74 n y 
C3 H3 BIA sing 75 n n 
C4 C10 BIA doub 76 n y 
C4 C31 BIA sing 77 n y 
C4 H4 BIA sing 78 n n 
O5 C32 BIA sing 79 n n 
O5 H5 BIA sing 80 n n 
C6 O8 BIA doub 81 n n 
C6 C11 BIA sing 82 n n 
C6 C22 BIA sing 83 n n 
C7 O9 BIA sing 84 n n 
C7 C32 BIA sing 85 n y 
O9 H9 BIA sing 86 n n 
C10 C37 BIA sing 87 n y 
C10 H10 BIA sing 88 n n 
C11 C19 BIA doub 89 n y 
C12 N23 BIA sing 90 n n 
C12 C25 BIA sing 91 n n 
C12 H121 BIA sing 92 n n 
C12 H122 BIA sing 93 n n 
N14 O17 BIA doub 94 n n 
N14 O18 BIA sing 95 n n 
N14 C28 BIA sing 96 n n 
C16 C21 BIA sing 97 n n 
C16 N23 BIA sing 98 n n 
C16 H161 BIA sing 99 n n 
C16 H162 BIA sing 100 n n 
C19 C28 BIA sing 101 n y 
C19 H19 BIA sing 102 n n 
C21 H211 BIA sing 103 n n 
C21 H212 BIA sing 104 n n 
C22 C27 BIA sing 105 n n 
C22 H221 BIA sing 106 n n 
C22 H222 BIA sing 107 n n 
N23 C27 BIA sing 108 n n 
C24 C26 BIA sing 109 n y 
C24 C33 BIA sing 110 n n 
C24 C37 BIA doub 111 n y 
C25 H251 BIA sing 112 n n 
C25 H252 BIA sing 113 n n 
C26 C31 BIA doub 114 n y 
C26 H26 BIA sing 115 n n 
C27 H271 BIA sing 116 n n 
C27 H272 BIA sing 117 n n 
C28 C32 BIA doub 118 n y 
C33 F37 BIA sing 119 n n 
C33 F38 BIA sing 120 n n 
C33 F39 BIA sing 121 n n 
C37 H37 BIA sing 122 n n 
#
_atom_sites.entry_id                     1H1D 
_atom_sites.fract_transf_matrix[1][1]    0.019421 
_atom_sites.fract_transf_matrix[1][2]    0.011213 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022426 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005942 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 300 300 MG MG . 
C 3 SAM A 1 301 301 SAM SAM . 
D 4 BIA A 1 335 335 BIA BIA . 
E 5 HOH A 1 2001 2001 HOH HOH . 
E 5 HOH A 2 2002 2002 HOH HOH . 
E 5 HOH A 3 2003 2003 HOH HOH . 
E 5 HOH A 4 2004 2004 HOH HOH . 
E 5 HOH A 5 2005 2005 HOH HOH . 
E 5 HOH A 6 2006 2006 HOH HOH . 
E 5 HOH A 7 2007 2007 HOH HOH . 
E 5 HOH A 8 2008 2008 HOH HOH . 
E 5 HOH A 9 2009 2009 HOH HOH . 
E 5 HOH A 10 2010 2010 HOH HOH . 
E 5 HOH A 11 2011 2011 HOH HOH . 
E 5 HOH A 12 2012 2012 HOH HOH . 
E 5 HOH A 13 2013 2013 HOH HOH . 
E 5 HOH A 14 2014 2014 HOH HOH . 
E 5 HOH A 15 2015 2015 HOH HOH . 
E 5 HOH A 16 2016 2016 HOH HOH . 
E 5 HOH A 17 2017 2017 HOH HOH . 
E 5 HOH A 18 2018 2018 HOH HOH . 
E 5 HOH A 19 2019 2019 HOH HOH . 
E 5 HOH A 20 2020 2020 HOH HOH . 
E 5 HOH A 21 2021 2021 HOH HOH . 
E 5 HOH A 22 2022 2022 HOH HOH . 
E 5 HOH A 23 2023 2023 HOH HOH . 
E 5 HOH A 24 2024 2024 HOH HOH . 
E 5 HOH A 25 2025 2025 HOH HOH . 
E 5 HOH A 26 2026 2026 HOH HOH . 
E 5 HOH A 27 2027 2027 HOH HOH . 
E 5 HOH A 28 2028 2028 HOH HOH . 
E 5 HOH A 29 2029 2029 HOH HOH . 
E 5 HOH A 30 2030 2030 HOH HOH . 
E 5 HOH A 31 2031 2031 HOH HOH . 
E 5 HOH A 32 2032 2032 HOH HOH . 
E 5 HOH A 33 2033 2033 HOH HOH . 
E 5 HOH A 34 2034 2034 HOH HOH . 
E 5 HOH A 35 2035 2035 HOH HOH . 
E 5 HOH A 36 2036 2036 HOH HOH . 
E 5 HOH A 37 2037 2037 HOH HOH . 
E 5 HOH A 38 2038 2038 HOH HOH . 
E 5 HOH A 39 2039 2039 HOH HOH . 
E 5 HOH A 40 2040 2040 HOH HOH . 
E 5 HOH A 41 2041 2041 HOH HOH . 
E 5 HOH A 42 2042 2042 HOH HOH . 
E 5 HOH A 43 2043 2043 HOH HOH . 
E 5 HOH A 44 2044 2044 HOH HOH . 
E 5 HOH A 45 2045 2045 HOH HOH . 
E 5 HOH A 46 2046 2046 HOH HOH . 
E 5 HOH A 47 2047 2047 HOH HOH . 
E 5 HOH A 48 2048 2048 HOH HOH . 
E 5 HOH A 49 2049 2049 HOH HOH . 
E 5 HOH A 50 2050 2050 HOH HOH . 
E 5 HOH A 51 2051 2051 HOH HOH . 
E 5 HOH A 52 2052 2052 HOH HOH . 
E 5 HOH A 53 2053 2053 HOH HOH . 
E 5 HOH A 54 2054 2054 HOH HOH . 
E 5 HOH A 55 2055 2055 HOH HOH . 
E 5 HOH A 56 2056 2056 HOH HOH . 
E 5 HOH A 57 2057 2057 HOH HOH . 
E 5 HOH A 58 2058 2058 HOH HOH . 
E 5 HOH A 59 2059 2059 HOH HOH . 
E 5 HOH A 60 2060 2060 HOH HOH . 
E 5 HOH A 61 2061 2061 HOH HOH . 
E 5 HOH A 62 2062 2062 HOH HOH . 
E 5 HOH A 63 2063 2063 HOH HOH . 
E 5 HOH A 64 2064 2064 HOH HOH . 
E 5 HOH A 65 2065 2065 HOH HOH . 
E 5 HOH A 66 2066 2066 HOH HOH . 
E 5 HOH A 67 2067 2067 HOH HOH . 
E 5 HOH A 68 2068 2068 HOH HOH . 
E 5 HOH A 69 2069 2069 HOH HOH . 
E 5 HOH A 70 2070 2070 HOH HOH . 
E 5 HOH A 71 2071 2071 HOH HOH . 
E 5 HOH A 72 2072 2072 HOH HOH . 
E 5 HOH A 73 2073 2073 HOH HOH . 
E 5 HOH A 74 2074 2074 HOH HOH . 
E 5 HOH A 75 2075 2075 HOH HOH . 
E 5 HOH A 76 2076 2076 HOH HOH . 
E 5 HOH A 77 2077 2077 HOH HOH . 
E 5 HOH A 78 2078 2078 HOH HOH . 
E 5 HOH A 79 2079 2079 HOH HOH . 
E 5 HOH A 80 2080 2080 HOH HOH . 
E 5 HOH A 81 2081 2081 HOH HOH . 
E 5 HOH A 82 2082 2082 HOH HOH . 
E 5 HOH A 83 2083 2083 HOH HOH . 
E 5 HOH A 84 2084 2084 HOH HOH . 
E 5 HOH A 85 2085 2085 HOH HOH . 
E 5 HOH A 86 2086 2086 HOH HOH . 
E 5 HOH A 87 2087 2087 HOH HOH . 
E 5 HOH A 88 2088 2088 HOH HOH . 
E 5 HOH A 89 2089 2089 HOH HOH . 
E 5 HOH A 90 2090 2090 HOH HOH . 
E 5 HOH A 91 2091 2091 HOH HOH . 
E 5 HOH A 92 2092 2092 HOH HOH . 
E 5 HOH A 93 2093 2093 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N2 BIA . . . D 4 -32.131 57.656 52.804 1 52.61 ? N2 BIA 335 A 1 
HETATM 2 C C3 BIA . . . D 4 -25.78 61.51 51.018 1 24.35 ? C3 BIA 335 A 1 
HETATM 3 C C4 BIA . . . D 4 -34.188 57.824 51.329 1 57.01 ? C4 BIA 335 A 1 
HETATM 4 O O5 BIA . . . D 4 -22.739 62.155 48.99 1 23.4 ? O5 BIA 335 A 1 
HETATM 5 C C6 BIA . . . D 4 -26.798 59.482 52.03 1 30.21 ? C6 BIA 335 A 1 
HETATM 6 C C7 BIA . . . D 4 -24.705 62.217 50.216 1 24.05 ? C7 BIA 335 A 1 
HETATM 7 O O8 BIA . . . D 4 -27.551 60.198 52.686 1 31.84 ? O8 BIA 335 A 1 
HETATM 8 O O9 BIA . . . D 4 -24.779 63.551 50.046 1 24.38 ? O9 BIA 335 A 1 
HETATM 9 C C10 BIA . . . D 4 -35.575 57.648 51.183 1 58.47 ? C10 BIA 335 A 1 
HETATM 10 C C11 BIA . . . D 4 -25.726 60.116 51.215 1 27.43 ? C11 BIA 335 A 1 
HETATM 11 C C12 BIA . . . D 4 -30.14 56.835 53.969 1 48.63 ? C12 BIA 335 A 1 
HETATM 12 N N14 BIA . . . D 4 -22.579 59.146 49.344 1 25.39 ? N14 BIA 335 A 1 
HETATM 13 C C16 BIA . . . D 4 -29.944 58.319 51.997 1 47.88 ? C16 BIA 335 A 1 
HETATM 14 O O17 BIA . . . D 4 -21.664 59.65 48.672 1 24.86 ? O17 BIA 335 A 1 
HETATM 15 O O18 BIA . . . D 4 -22.615 57.954 49.554 1 27.31 ? O18 BIA 335 A 1 
HETATM 16 C C19 BIA . . . D 4 -24.659 59.374 50.648 1 24.14 ? C19 BIA 335 A 1 
HETATM 17 C C21 BIA . . . D 4 -31.339 57.978 51.587 1 50.17 ? C21 BIA 335 A 1 
HETATM 18 C C22 BIA . . . D 4 -26.946 57.963 52.06 1 34.51 ? C22 BIA 335 A 1 
HETATM 19 N N23 BIA . . . D 4 -29.29 57.189 52.791 1 46.21 ? N23 BIA 335 A 1 
HETATM 20 C C24 BIA . . . D 4 -35.717 56.841 53.471 1 62.56 ? C24 BIA 335 A 1 
HETATM 21 C C25 BIA . . . D 4 -31.519 56.495 53.513 1 50.79 ? C25 BIA 335 A 1 
HETATM 22 C C26 BIA . . . D 4 -34.352 57.013 53.624 1 59.33 ? C26 BIA 335 A 1 
HETATM 23 C C27 BIA . . . D 4 -27.89 57.576 53.191 1 40.53 ? C27 BIA 335 A 1 
HETATM 24 C C28 BIA . . . D 4 -23.65 60.023 49.896 1 24.93 ? C28 BIA 335 A 1 
HETATM 25 C C31 BIA . . . D 4 -33.529 57.503 52.58 1 55.77 ? C31 BIA 335 A 1 
HETATM 26 C C32 BIA . . . D 4 -23.652 61.449 49.674 1 24.11 ? C32 BIA 335 A 1 
HETATM 27 C C33 BIA . . . D 4 -36.484 56.307 54.66 1 64.55 ? C33 BIA 335 A 1 
HETATM 28 F F37 BIA . . . D 4 -37.367 55.409 54.172 1 66.65 ? F37 BIA 335 A 1 
HETATM 29 F F38 BIA . . . D 4 -35.748 55.647 55.477 1 65.3 ? F38 BIA 335 A 1 
HETATM 30 F F39 BIA . . . D 4 -37.127 57.25 55.166 1 67.07 ? F39 BIA 335 A 1 
HETATM 31 C C37 BIA . . . D 4 -36.366 57.153 52.247 1 60.56 ? C37 BIA 335 A 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#