data_1H4I # _model_server_result.job_id LP1W0y7I6bfa7JB0K3w_tA _model_server_result.datetime_utc '2025-07-31 03:03:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1h4i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 1H4I # _exptl.entry_id 1H4I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 330.206 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PYRROLOQUINOLINE QUINONE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 86.21 _cell.angle_beta 76.09 _cell.angle_gamma 70.44 _cell.entry_id 1H4I _cell.length_a 61.16 _cell.length_b 72.19 _cell.length_c 86.17 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1H4I _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 103 A CYS 103 1_555 A SG CYS 104 A CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf2 A SG CYS 386 A CYS 386 1_555 A SG CYS 415 A CYS 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf3 B SG CYS 6 B CYS 6 1_555 B SG CYS 12 B CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf4 C SG CYS 103 C CYS 103 1_555 C SG CYS 104 C CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf5 C SG CYS 386 C CYS 386 1_555 C SG CYS 415 C CYS 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf6 D SG CYS 6 D CYS 6 1_555 D SG CYS 12 D CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc1 A OE1 GLU 177 A GLU 177 1_555 F CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc2 A OE2 GLU 177 A GLU 177 1_555 F CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc3 A OD1 ASN 261 A ASN 261 1_555 F CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? metalc ? metalc4 E O5 PQQ . A PQQ 601 1_555 F CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc5 E N6 PQQ . A PQQ 601 1_555 F CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc6 E O7B PQQ . A PQQ 601 1_555 F CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc7 C OE1 GLU 177 C GLU 177 1_555 H CA CA . C CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc8 C OE2 GLU 177 C GLU 177 1_555 H CA CA . C CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc9 C OD1 ASN 261 C ASN 261 1_555 H CA CA . C CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? metalc ? metalc10 G N6 PQQ . C PQQ 601 1_555 H CA CA . C CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc11 G O7B PQQ . C PQQ 601 1_555 H CA CA . C CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc12 G O5 PQQ . C PQQ 601 1_555 H CA CA . C CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? # _chem_comp.formula 'C14 H6 N2 O8' _chem_comp.formula_weight 330.206 _chem_comp.id PQQ _chem_comp.mon_nstd_flag . _chem_comp.name 'PYRROLOQUINOLINE QUINONE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 PQQ sing 258 n y N1 C1A PQQ sing 259 n y N1 HN1 PQQ sing 260 n n C2 C2X PQQ sing 261 n n C2 C3 PQQ doub 262 n y C2X O2A PQQ doub 263 n n C2X O2B PQQ sing 264 n n O2B HOB2 PQQ sing 265 n n C3 C3A PQQ sing 266 n y C3 H3 PQQ sing 267 n n C3A C1A PQQ doub 268 n y C3A C4 PQQ sing 269 n n C1A C9A PQQ sing 270 n y C4 O4 PQQ doub 271 n n C4 C5 PQQ sing 272 n n C5 O5 PQQ doub 273 n n C5 C6A PQQ sing 274 n n C6A N6 PQQ doub 275 n y C6A C9A PQQ sing 276 n y N6 C7 PQQ sing 277 n y C7 C7X PQQ sing 278 n n C7 C8 PQQ doub 279 n y C7X O7A PQQ doub 280 n n C7X O7B PQQ sing 281 n n O7B HOB7 PQQ sing 282 n n C8 C9 PQQ sing 283 n y C8 H8 PQQ sing 284 n n C9 C9X PQQ sing 285 n n C9 C9A PQQ doub 286 n y C9X O9A PQQ doub 287 n n C9X O9B PQQ sing 288 n n O9B HOB9 PQQ sing 289 n n # _atom_sites.entry_id 1H4I _atom_sites.fract_transf_matrix[1][1] 0.01635 _atom_sites.fract_transf_matrix[1][2] -0.005809 _atom_sites.fract_transf_matrix[1][3] -0.004141 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014701 _atom_sites.fract_transf_matrix[2][3] 0.000231 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011957 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PQQ A 1 601 601 PQQ PQQ . F 4 CA A 1 701 701 CA CA . G 3 PQQ C 1 601 601 PQQ PQQ . H 4 CA C 1 701 701 CA CA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 PQQ . . . E 3 52.593 -21.225 57.723 1 20 ? N1 PQQ 601 A 1 HETATM 2 C C2 PQQ . . . E 3 52.051 -20.607 58.822 1 20 ? C2 PQQ 601 A 1 HETATM 3 C C2X PQQ . . . E 3 51.175 -21.278 59.761 1 20 ? C2X PQQ 601 A 1 HETATM 4 O O2A PQQ . . . E 3 50.859 -22.497 59.384 1 20 ? O2A PQQ 601 A 1 HETATM 5 O O2B PQQ . . . E 3 50.715 -20.707 60.724 1 20 ? O2B PQQ 601 A 1 HETATM 6 C C3 PQQ . . . E 3 52.567 -19.362 58.875 1 20 ? C3 PQQ 601 A 1 HETATM 7 C C3A PQQ . . . E 3 53.471 -19.242 57.807 1 20 ? C3A PQQ 601 A 1 HETATM 8 C C1A PQQ . . . E 3 53.477 -20.421 57.089 1 20 ? C1A PQQ 601 A 1 HETATM 9 C C4 PQQ . . . E 3 54.258 -18.133 57.371 1 20 ? C4 PQQ 601 A 1 HETATM 10 O O4 PQQ . . . E 3 53.805 -17.092 57.492 1 20 ? O4 PQQ 601 A 1 HETATM 11 C C5 PQQ . . . E 3 55.093 -18.237 56.21 1 20 ? C5 PQQ 601 A 1 HETATM 12 O O5 PQQ . . . E 3 55.752 -17.232 55.92 1 20 ? O5 PQQ 601 A 1 HETATM 13 C C6A PQQ . . . E 3 55.079 -19.577 55.476 1 20 ? C6A PQQ 601 A 1 HETATM 14 N N6 PQQ . . . E 3 55.856 -19.592 54.407 1 20 ? N6 PQQ 601 A 1 HETATM 15 C C7 PQQ . . . E 3 55.925 -20.717 53.681 1 20 ? C7 PQQ 601 A 1 HETATM 16 C C7X PQQ . . . E 3 56.859 -20.659 52.509 1 20 ? C7X PQQ 601 A 1 HETATM 17 O O7A PQQ . . . E 3 56.738 -21.665 51.687 1 20 ? O7A PQQ 601 A 1 HETATM 18 O O7B PQQ . . . E 3 57.495 -19.697 52.18 1 20 ? O7B PQQ 601 A 1 HETATM 19 C C8 PQQ . . . E 3 55.208 -21.853 54.008 1 20 ? C8 PQQ 601 A 1 HETATM 20 C C9 PQQ . . . E 3 54.363 -21.844 55.107 1 20 ? C9 PQQ 601 A 1 HETATM 21 C C9X PQQ . . . E 3 53.578 -23.112 55.365 1 20 ? C9X PQQ 601 A 1 HETATM 22 O O9A PQQ . . . E 3 53.78 -24.051 54.629 1 20 ? O9A PQQ 601 A 1 HETATM 23 O O9B PQQ . . . E 3 52.907 -23.338 56.289 1 20 ? O9B PQQ 601 A 1 HETATM 24 C C9A PQQ . . . E 3 54.266 -20.67 55.892 1 20 ? C9A PQQ 601 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #