data_1H6V
#
_model_server_result.job_id            C0BKe2fvSZQeVaQJzfCC7A 
_model_server_result.datetime_utc      '2024-11-27 19:18:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1h6v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":600}' 
#
_entry.id    1H6V 
#
_exptl.entry_id    1H6V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.64 
_cell.angle_gamma         90 
_cell.entry_id            1H6V 
_cell.length_a            78.92 
_cell.length_b            140.464 
_cell.length_c            170.832 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1H6V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS dimeric 2 author_and_software_defined_assembly 1 
PQS dimeric 2 author_and_software_defined_assembly 2 
PQS dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H,I,J,S,T 1 1 
C,D,K,L,M,N,U,V 2 1 
E,F,O,P,Q,R,W,X 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 I N N 
? 2 K N N 
? 2 M N N 
? 2 O N N 
? 2 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 59 A CYS 59 1_555 A SG CYS 64 A CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? 
disulf ? disulf2 B SG CYS 59 B CYS 59 1_555 B SG CYS 64 B CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? 
disulf ? disulf3 C SG CYS 59 C CYS 59 1_555 C SG CYS 64 C CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 D SG CYS 59 D CYS 59 1_555 D SG CYS 64 D CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
disulf ? disulf5 E SG CYS 59 E CYS 59 1_555 E SG CYS 64 E CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? 
disulf ? disulf6 F SG CYS 59 F CYS 59 1_555 F SG CYS 64 F CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     1H6V 
_atom_sites.fract_transf_matrix[1][1]    0.012671 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001028 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007119 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005873 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 FAD A 1 600 600 FAD FAD . 
H 3 NDP A 1 601 601 NDP NDP . 
I 2 FAD B 1 600 600 FAD FAD . 
J 3 NDP B 1 601 601 NDP NDP . 
K 2 FAD C 1 600 600 FAD FAD . 
L 3 NDP C 1 601 601 NDP NDP . 
M 2 FAD D 1 600 600 FAD FAD . 
N 3 NDP D 1 601 601 NDP NDP . 
O 2 FAD E 1 600 600 FAD FAD . 
P 3 NDP E 1 601 601 NDP NDP . 
Q 2 FAD F 1 600 600 FAD FAD . 
R 3 NDP F 1 601 601 NDP NDP . 
S 4 HOH A 1 2001 2001 HOH HOH . 
T 4 HOH B 1 2001 2001 HOH HOH . 
U 4 HOH C 1 2001 2001 HOH HOH . 
U 4 HOH C 2 2002 2002 HOH HOH . 
U 4 HOH C 3 2003 2003 HOH HOH . 
V 4 HOH D 1 2001 2001 HOH HOH . 
W 4 HOH E 1 2001 2001 HOH HOH . 
W 4 HOH E 2 2002 2002 HOH HOH . 
X 4 HOH F 1 2001 2001 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . Q 2 30.979 -16.401 3.471 1 33.17 ? PA FAD 600 F 1 
HETATM 2 O O1A FAD . . . Q 2 30.47 -17.416 4.451 1 29.98 ? O1A FAD 600 F 1 
HETATM 3 O O2A FAD . . . Q 2 30.688 -14.932 3.858 1 33.33 ? O2A FAD 600 F 1 
HETATM 4 O O5B FAD . . . Q 2 30.45 -16.598 1.959 1 36.93 ? O5B FAD 600 F 1 
HETATM 5 C C5B FAD . . . Q 2 30.659 -17.746 1.128 1 41.4 ? C5B FAD 600 F 1 
HETATM 6 C C4B FAD . . . Q 2 29.613 -17.778 0.001 1 43.55 ? C4B FAD 600 F 1 
HETATM 7 O O4B FAD . . . Q 2 30.157 -18.393 -1.137 1 45.41 ? O4B FAD 600 F 1 
HETATM 8 C C3B FAD . . . Q 2 28.383 -18.605 0.328 1 45.15 ? C3B FAD 600 F 1 
HETATM 9 O O3B FAD . . . Q 2 27.316 -18.079 -0.421 1 45.97 ? O3B FAD 600 F 1 
HETATM 10 C C2B FAD . . . Q 2 28.772 -19.94 -0.234 1 45.68 ? C2B FAD 600 F 1 
HETATM 11 O O2B FAD . . . Q 2 27.727 -20.843 -0.428 1 46.7 ? O2B FAD 600 F 1 
HETATM 12 C C1B FAD . . . Q 2 29.352 -19.483 -1.541 1 46.74 ? C1B FAD 600 F 1 
HETATM 13 N N9A FAD . . . Q 2 30.107 -20.636 -2.045 1 50.14 ? N9A FAD 600 F 1 
HETATM 14 C C8A FAD . . . Q 2 30.547 -21.66 -1.249 1 51.73 ? C8A FAD 600 F 1 
HETATM 15 N N7A FAD . . . Q 2 31.178 -22.57 -2.016 1 52.53 ? N7A FAD 600 F 1 
HETATM 16 C C5A FAD . . . Q 2 31.154 -22.153 -3.296 1 53.16 ? C5A FAD 600 F 1 
HETATM 17 C C6A FAD . . . Q 2 31.647 -22.738 -4.458 1 53.77 ? C6A FAD 600 F 1 
HETATM 18 N N6A FAD . . . Q 2 31.933 -24.042 -4.46 1 50.86 ? N6A FAD 600 F 1 
HETATM 19 N N1A FAD . . . Q 2 31.452 -22.06 -5.647 1 55.34 ? N1A FAD 600 F 1 
HETATM 20 C C2A FAD . . . Q 2 30.787 -20.843 -5.681 1 54.34 ? C2A FAD 600 F 1 
HETATM 21 N N3A FAD . . . Q 2 30.307 -20.289 -4.517 1 53.76 ? N3A FAD 600 F 1 
HETATM 22 C C4A FAD . . . Q 2 30.482 -20.931 -3.335 1 52.24 ? C4A FAD 600 F 1 
HETATM 23 N N1 FAD . . . Q 2 30.334 -12.511 11.759 1 35.16 ? N1 FAD 600 F 1 
HETATM 24 C C2 FAD . . . Q 2 30.685 -11.293 12.32 1 36.27 ? C2 FAD 600 F 1 
HETATM 25 O O2 FAD . . . Q 2 31.804 -10.807 12.191 1 39.41 ? O2 FAD 600 F 1 
HETATM 26 N N3 FAD . . . Q 2 29.801 -10.573 13.067 1 34.05 ? N3 FAD 600 F 1 
HETATM 27 C C4 FAD . . . Q 2 28.552 -11.043 13.275 1 32.47 ? C4 FAD 600 F 1 
HETATM 28 O O4 FAD . . . Q 2 27.835 -10.339 13.955 1 31.58 ? O4 FAD 600 F 1 
HETATM 29 C C4X FAD . . . Q 2 28.155 -12.259 12.736 1 32.91 ? C4X FAD 600 F 1 
HETATM 30 N N5 FAD . . . Q 2 26.881 -12.746 12.93 1 31.88 ? N5 FAD 600 F 1 
HETATM 31 C C5X FAD . . . Q 2 26.526 -13.962 12.373 1 32.94 ? C5X FAD 600 F 1 
HETATM 32 C C6 FAD . . . Q 2 25.24 -14.477 12.56 1 33.86 ? C6 FAD 600 F 1 
HETATM 33 C C7 FAD . . . Q 2 24.836 -15.7 12.021 1 30.91 ? C7 FAD 600 F 1 
HETATM 34 C C7M FAD . . . Q 2 23.448 -16.249 12.247 1 27.62 ? C7M FAD 600 F 1 
HETATM 35 C C8 FAD . . . Q 2 25.752 -16.405 11.275 1 30.7 ? C8 FAD 600 F 1 
HETATM 36 C C8M FAD . . . Q 2 25.322 -17.718 10.686 1 31.28 ? C8M FAD 600 F 1 
HETATM 37 C C9 FAD . . . Q 2 27.041 -15.907 11.076 1 31.75 ? C9 FAD 600 F 1 
HETATM 38 C C9A FAD . . . Q 2 27.438 -14.694 11.623 1 33.04 ? C9A FAD 600 F 1 
HETATM 39 N N10 FAD . . . Q 2 28.716 -14.203 11.433 1 33.44 ? N10 FAD 600 F 1 
HETATM 40 C C10 FAD . . . Q 2 29.064 -12.992 11.977 1 33.94 ? C10 FAD 600 F 1 
HETATM 41 C C1' FAD . . . Q 2 29.796 -15.041 10.849 1 32.87 ? C1' FAD 600 F 1 
HETATM 42 C C2' FAD . . . Q 2 30.091 -14.438 9.486 1 34 ? C2' FAD 600 F 1 
HETATM 43 O O2' FAD . . . Q 2 28.962 -14.708 8.712 1 36.48 ? O2' FAD 600 F 1 
HETATM 44 C C3' FAD . . . Q 2 31.338 -15.024 8.813 1 33.45 ? C3' FAD 600 F 1 
HETATM 45 O O3' FAD . . . Q 2 32.474 -14.641 9.563 1 36.59 ? O3' FAD 600 F 1 
HETATM 46 C C4' FAD . . . Q 2 31.596 -14.511 7.398 1 30.67 ? C4' FAD 600 F 1 
HETATM 47 O O4' FAD . . . Q 2 30.454 -13.963 6.768 1 27.34 ? O4' FAD 600 F 1 
HETATM 48 C C5' FAD . . . Q 2 32.207 -15.608 6.547 1 30.1 ? C5' FAD 600 F 1 
HETATM 49 O O5' FAD . . . Q 2 32.56 -15.024 5.316 1 29.78 ? O5' FAD 600 F 1 
HETATM 50 P P FAD . . . Q 2 33.509 -15.839 4.348 1 28.58 ? P FAD 600 F 1 
HETATM 51 O O1P FAD . . . Q 2 34.388 -14.906 3.633 1 29.39 ? O1P FAD 600 F 1 
HETATM 52 O O2P FAD . . . Q 2 34.251 -16.862 5.206 1 30.55 ? O2P FAD 600 F 1 
HETATM 53 O O3P FAD . . . Q 2 32.559 -16.595 3.314 1 31.2 ? O3P FAD 600 F 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    35 
_model_server_stats.query_time_ms           243 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           53 
#