data_1H94 # _model_server_result.job_id vKKOr5AiHJFyBB3QGuz6AQ _model_server_result.datetime_utc '2025-01-20 15:48:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1h94 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":799}' # _entry.id 1H94 # _exptl.entry_id 1H94 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.1 _cell.angle_gamma 90 _cell.entry_id 1H94 _cell.length_a 131.9 _cell.length_b 45.2 _cell.length_c 93.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1H94 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 131.9 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 237 n n PA O2A NAD sing 238 n n PA O5B NAD sing 239 n n PA O3 NAD sing 240 n n O2A HOA2 NAD sing 241 n n O5B C5B NAD sing 242 n n C5B C4B NAD sing 243 n n C5B H51A NAD sing 244 n n C5B H52A NAD sing 245 n n C4B O4B NAD sing 246 n n C4B C3B NAD sing 247 n n C4B H4B NAD sing 248 n n O4B C1B NAD sing 249 n n C3B O3B NAD sing 250 n n C3B C2B NAD sing 251 n n C3B H3B NAD sing 252 n n O3B HO3A NAD sing 253 n n C2B O2B NAD sing 254 n n C2B C1B NAD sing 255 n n C2B H2B NAD sing 256 n n O2B HO2A NAD sing 257 n n C1B N9A NAD sing 258 n n C1B H1B NAD sing 259 n n N9A C8A NAD sing 260 n y N9A C4A NAD sing 261 n y C8A N7A NAD doub 262 n y C8A H8A NAD sing 263 n n N7A C5A NAD sing 264 n y C5A C6A NAD sing 265 n y C5A C4A NAD doub 266 n y C6A N6A NAD sing 267 n n C6A N1A NAD doub 268 n y N6A H61A NAD sing 269 n n N6A H62A NAD sing 270 n n N1A C2A NAD sing 271 n y C2A N3A NAD doub 272 n y C2A H2A NAD sing 273 n n N3A C4A NAD sing 274 n y O3 PN NAD sing 275 n n PN O1N NAD doub 276 n n PN O2N NAD sing 277 n n PN O5D NAD sing 278 n n O5D C5D NAD sing 279 n n C5D C4D NAD sing 280 n n C5D H51N NAD sing 281 n n C5D H52N NAD sing 282 n n C4D O4D NAD sing 283 n n C4D C3D NAD sing 284 n n C4D H4D NAD sing 285 n n O4D C1D NAD sing 286 n n C3D O3D NAD sing 287 n n C3D C2D NAD sing 288 n n C3D H3D NAD sing 289 n n O3D HO3N NAD sing 290 n n C2D O2D NAD sing 291 n n C2D C1D NAD sing 292 n n C2D H2D NAD sing 293 n n O2D HO2N NAD sing 294 n n C1D N1N NAD sing 295 n n C1D H1D NAD sing 296 n n N1N C2N NAD sing 297 n y N1N C6N NAD doub 298 n y C2N C3N NAD doub 299 n y C2N H2N NAD sing 300 n n C3N C7N NAD sing 301 n n C3N C4N NAD sing 302 n y C7N O7N NAD doub 303 n n C7N N7N NAD sing 304 n n N7N H71N NAD sing 305 n n N7N H72N NAD sing 306 n n C4N C5N NAD doub 307 n y C4N H4N NAD sing 308 n n C5N C6N NAD sing 309 n y C5N H5N NAD sing 310 n n C6N H6N NAD sing 311 n n # _atom_sites.entry_id 1H94 _atom_sites.fract_transf_matrix[1][1] 0.007581 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002332 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022124 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01119 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD A 1 799 799 NAD NAD . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . C 3 HOH A 38 2038 2038 HOH HOH . C 3 HOH A 39 2039 2039 HOH HOH . C 3 HOH A 40 2040 2040 HOH HOH . C 3 HOH A 41 2041 2041 HOH HOH . C 3 HOH A 42 2042 2042 HOH HOH . C 3 HOH A 43 2043 2043 HOH HOH . C 3 HOH A 44 2044 2044 HOH HOH . C 3 HOH A 45 2045 2045 HOH HOH . C 3 HOH A 46 2046 2046 HOH HOH . C 3 HOH A 47 2047 2047 HOH HOH . C 3 HOH A 48 2048 2048 HOH HOH . C 3 HOH A 49 2049 2049 HOH HOH . C 3 HOH A 50 2050 2050 HOH HOH . C 3 HOH A 51 2051 2051 HOH HOH . C 3 HOH A 52 2052 2052 HOH HOH . C 3 HOH A 53 2053 2053 HOH HOH . C 3 HOH A 54 2054 2054 HOH HOH . C 3 HOH A 55 2055 2055 HOH HOH . C 3 HOH A 56 2056 2056 HOH HOH . C 3 HOH A 57 2057 2057 HOH HOH . C 3 HOH A 58 2058 2058 HOH HOH . C 3 HOH A 59 2059 2059 HOH HOH . C 3 HOH A 60 2060 2060 HOH HOH . C 3 HOH A 61 2061 2061 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . B 2 92.243 -10.51 35.759 0.6 50.68 ? PA NAD 799 A 1 HETATM 2 O O1A NAD . . . B 2 91.181 -9.774 36.497 0.6 51.3 ? O1A NAD 799 A 1 HETATM 3 O O2A NAD . . . B 2 92.263 -11.929 36.172 0.6 49.67 ? O2A NAD 799 A 1 HETATM 4 O O5B NAD . . . B 2 93.688 -9.996 36.266 0.6 51.35 ? O5B NAD 799 A 1 HETATM 5 C C5B NAD . . . B 2 94.551 -9.54 35.217 0.6 50.05 ? C5B NAD 799 A 1 HETATM 6 C C4B NAD . . . B 2 95.99 -9.326 35.644 0.6 49.02 ? C4B NAD 799 A 1 HETATM 7 O O4B NAD . . . B 2 96.056 -8.356 36.711 0.6 50.19 ? O4B NAD 799 A 1 HETATM 8 C C3B NAD . . . B 2 96.649 -10.581 36.185 0.6 47.72 ? C3B NAD 799 A 1 HETATM 9 O O3B NAD . . . B 2 97.775 -10.878 35.369 0.6 47.14 ? O3B NAD 799 A 1 HETATM 10 C C2B NAD . . . B 2 97.105 -10.187 37.598 0.6 46.89 ? C2B NAD 799 A 1 HETATM 11 O O2B NAD . . . B 2 98.376 -10.751 37.901 0.6 46.81 ? O2B NAD 799 A 1 HETATM 12 C C1B NAD . . . B 2 97.202 -8.674 37.448 0.6 47.51 ? C1B NAD 799 A 1 HETATM 13 N N9A NAD . . . B 2 97.305 -7.963 38.737 0.6 45.7 ? N9A NAD 799 A 1 HETATM 14 C C8A NAD . . . B 2 96.413 -7.943 39.779 0.6 47.61 ? C8A NAD 799 A 1 HETATM 15 N N7A NAD . . . B 2 96.738 -7.122 40.753 0.6 45.68 ? N7A NAD 799 A 1 HETATM 16 C C5A NAD . . . B 2 97.91 -6.571 40.329 0.6 44.75 ? C5A NAD 799 A 1 HETATM 17 C C6A NAD . . . B 2 98.709 -5.648 40.973 0.6 42.75 ? C6A NAD 799 A 1 HETATM 18 N N6A NAD . . . B 2 98.367 -5.294 42.246 0.6 40.21 ? N6A NAD 799 A 1 HETATM 19 N N1A NAD . . . B 2 99.812 -5.264 40.28 0.6 42.08 ? N1A NAD 799 A 1 HETATM 20 C C2A NAD . . . B 2 100.091 -5.805 39.097 0.6 44.01 ? C2A NAD 799 A 1 HETATM 21 N N3A NAD . . . B 2 99.409 -6.718 38.424 0.6 45.55 ? N3A NAD 799 A 1 HETATM 22 C C4A NAD . . . B 2 98.303 -7.053 39.101 0.6 45.75 ? C4A NAD 799 A 1 HETATM 23 O O3 NAD . . . B 2 92.076 -10.399 34.177 0.6 52.73 ? O3 NAD 799 A 1 HETATM 24 P PN NAD . . . B 2 91.567 -9.746 32.824 0.6 51.45 ? PN NAD 799 A 1 HETATM 25 O O1N NAD . . . B 2 90.475 -10.531 32.202 0.6 51.12 ? O1N NAD 799 A 1 HETATM 26 O O2N NAD . . . B 2 92.667 -9.574 31.838 0.6 47.86 ? O2N NAD 799 A 1 HETATM 27 O O5D NAD . . . B 2 90.93 -8.325 33.061 0.6 48.78 ? O5D NAD 799 A 1 HETATM 28 C C5D NAD . . . B 2 89.572 -8.053 32.863 0.6 46.28 ? C5D NAD 799 A 1 HETATM 29 C C4D NAD . . . B 2 89.48 -6.843 31.977 0.6 46.25 ? C4D NAD 799 A 1 HETATM 30 O O4D NAD . . . B 2 88.212 -6.887 31.279 0.6 47.3 ? O4D NAD 799 A 1 HETATM 31 C C3D NAD . . . B 2 89.43 -5.62 32.879 0.6 46.64 ? C3D NAD 799 A 1 HETATM 32 O O3D NAD . . . B 2 90.393 -4.65 32.479 0.6 44.69 ? O3D NAD 799 A 1 HETATM 33 C C2D NAD . . . B 2 88.007 -5.105 32.711 0.6 48.36 ? C2D NAD 799 A 1 HETATM 34 O O2D NAD . . . B 2 87.974 -3.687 32.741 0.6 48.06 ? O2D NAD 799 A 1 HETATM 35 C C1D NAD . . . B 2 87.662 -5.608 31.316 0.6 48.77 ? C1D NAD 799 A 1 HETATM 36 N N1N NAD . . . B 2 86.23 -5.602 30.954 0.6 49.74 ? N1N NAD 799 A 1 HETATM 37 C C2N NAD . . . B 2 85.304 -5.163 31.813 0.6 53.39 ? C2N NAD 799 A 1 HETATM 38 C C3N NAD . . . B 2 83.985 -5.455 31.64 0.6 55.79 ? C3N NAD 799 A 1 HETATM 39 C C7N NAD . . . B 2 82.835 -5.234 32.542 0.6 57.4 ? C7N NAD 799 A 1 HETATM 40 O O7N NAD . . . B 2 81.96 -4.446 32.19 0.6 59.37 ? O7N NAD 799 A 1 HETATM 41 N N7N NAD . . . B 2 82.953 -5.909 33.714 0.6 58.19 ? N7N NAD 799 A 1 HETATM 42 C C4N NAD . . . B 2 83.588 -6.107 30.495 0.6 55.02 ? C4N NAD 799 A 1 HETATM 43 C C5N NAD . . . B 2 84.533 -6.474 29.575 0.6 53.72 ? C5N NAD 799 A 1 HETATM 44 C C6N NAD . . . B 2 85.837 -6.19 29.816 0.6 52.09 ? C6N NAD 799 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 44 #