data_1HAC # _model_server_result.job_id sMrd0I1cTi4eAmv89J7bcA _model_server_result.datetime_utc '2024-10-14 04:23:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hac # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":200}' # _entry.id 1HAC # _exptl.entry_id 1HAC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1HAC _cell.length_a 86.84 _cell.length_b 87.11 _cell.length_c 97.63 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HAC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 J N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E FE HEM . A HEM 200 1_555 A NE2 HIS 87 A HIS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc2 E FE HEM . A HEM 200 1_555 F C CMO . A CMO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.854 ? metalc ? metalc3 G FE HEM . B HEM 200 1_555 B NE2 HIS 92 B HIS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc4 G FE HEM . B HEM 200 1_555 H C CMO . B CMO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.864 ? metalc ? metalc5 G FE HEM . B HEM 200 1_555 H O CMO . B CMO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? covale ? covale1 I C2' NDD . B NDD 400 1_555 B NZ LYS 82 B LYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 I C6' NDD . B NDD 400 1_555 D NZ LYS 82 D LYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? metalc ? metalc6 J FE HEM . C HEM 200 1_555 C NE2 HIS 87 C HIS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc7 J FE HEM . C HEM 200 1_555 K C CMO . C CMO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.854 ? metalc ? metalc8 L FE HEM . D HEM 200 1_555 D NE2 HIS 92 D HIS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc9 L FE HEM . D HEM 200 1_555 M C CMO . D CMO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.862 ? metalc ? metalc10 E FE HEM . A HEM 200 1_555 F O CMO . A CMO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.087 ? metalc ? metalc11 J FE HEM . C HEM 200 1_555 K O CMO . C CMO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.013 ? metalc ? metalc12 L FE HEM . D HEM 200 1_555 M O CMO . D CMO 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.976 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # _atom_sites.entry_id 1HAC _atom_sites.fract_transf_matrix[1][1] 0.011515 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01148 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010243 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 200 200 HEM HEM . F 4 CMO A 1 201 200 CMO CMO . G 3 HEM B 1 200 200 HEM HEM . H 4 CMO B 1 201 200 CMO CMO . I 5 NDD B 1 400 400 NDD NDD . J 3 HEM C 1 200 200 HEM HEM . K 4 CMO C 1 201 200 CMO CMO . L 3 HEM D 1 200 200 HEM HEM . M 4 CMO D 1 201 200 CMO CMO . N 6 HOH A 1 202 10 HOH HOH . N 6 HOH A 2 203 13 HOH HOH . N 6 HOH A 3 204 18 HOH HOH . N 6 HOH A 4 205 22 HOH HOH . N 6 HOH A 5 206 26 HOH HOH . N 6 HOH A 6 207 27 HOH HOH . N 6 HOH A 7 208 36 HOH HOH . O 6 HOH B 1 401 1 HOH HOH . O 6 HOH B 2 402 2 HOH HOH . O 6 HOH B 3 403 4 HOH HOH . O 6 HOH B 4 404 21 HOH HOH . O 6 HOH B 5 405 40 HOH HOH . O 6 HOH B 6 406 43 HOH HOH . O 6 HOH B 7 407 44 HOH HOH . P 6 HOH C 1 202 3 HOH HOH . P 6 HOH C 2 203 7 HOH HOH . P 6 HOH C 3 204 9 HOH HOH . P 6 HOH C 4 205 11 HOH HOH . P 6 HOH C 5 206 14 HOH HOH . P 6 HOH C 6 207 19 HOH HOH . P 6 HOH C 7 208 23 HOH HOH . P 6 HOH C 8 209 28 HOH HOH . P 6 HOH C 9 210 29 HOH HOH . P 6 HOH C 10 211 32 HOH HOH . P 6 HOH C 11 212 33 HOH HOH . P 6 HOH C 12 213 35 HOH HOH . P 6 HOH C 13 214 37 HOH HOH . P 6 HOH C 14 215 38 HOH HOH . Q 6 HOH D 1 202 5 HOH HOH . Q 6 HOH D 2 203 6 HOH HOH . Q 6 HOH D 3 204 8 HOH HOH . Q 6 HOH D 4 205 12 HOH HOH . Q 6 HOH D 5 206 15 HOH HOH . Q 6 HOH D 6 207 16 HOH HOH . Q 6 HOH D 7 208 17 HOH HOH . Q 6 HOH D 8 209 20 HOH HOH . Q 6 HOH D 9 210 24 HOH HOH . Q 6 HOH D 10 211 25 HOH HOH . Q 6 HOH D 11 212 30 HOH HOH . Q 6 HOH D 12 213 31 HOH HOH . Q 6 HOH D 13 214 34 HOH HOH . Q 6 HOH D 14 215 39 HOH HOH . Q 6 HOH D 15 216 41 HOH HOH . Q 6 HOH D 16 217 42 HOH HOH . Q 6 HOH D 17 218 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . G 3 53.128 17.802 15.56 1 14.5 ? CHA HEM 200 B 1 HETATM 2 C CHB HEM . . . G 3 50.658 13.734 14.791 1 29.6 ? CHB HEM 200 B 1 HETATM 3 C CHC HEM . . . G 3 52.911 13.244 10.523 1 13.17 ? CHC HEM 200 B 1 HETATM 4 C CHD HEM . . . G 3 55.839 16.919 11.666 1 19.38 ? CHD HEM 200 B 1 HETATM 5 C C1A HEM . . . G 3 52.275 16.727 15.722 1 44.47 ? C1A HEM 200 B 1 HETATM 6 C C2A HEM . . . G 3 51.472 16.498 16.909 1 96.82 ? C2A HEM 200 B 1 HETATM 7 C C3A HEM . . . G 3 50.797 15.365 16.693 1 34.57 ? C3A HEM 200 B 1 HETATM 8 C C4A HEM . . . G 3 51.163 14.872 15.378 1 44.2 ? C4A HEM 200 B 1 HETATM 9 C CMA HEM . . . G 3 49.792 14.642 17.613 1 31.32 ? CMA HEM 200 B 1 HETATM 10 C CAA HEM . . . G 3 51.489 17.446 18.136 1 11.54 ? CAA HEM 200 B 1 HETATM 11 C CBA HEM . . . G 3 50.313 18.402 18.431 1 67.86 ? CBA HEM 200 B 1 HETATM 12 C CGA HEM . . . G 3 50.368 19.044 19.79 1 52.24 ? CGA HEM 200 B 1 HETATM 13 O O1A HEM . . . G 3 50.734 18.302 20.736 1 100 ? O1A HEM 200 B 1 HETATM 14 O O2A HEM . . . G 3 50.061 20.259 19.882 1 100 ? O2A HEM 200 B 1 HETATM 15 C C1B HEM . . . G 3 51.037 13.241 13.557 1 16.79 ? C1B HEM 200 B 1 HETATM 16 C C2B HEM . . . G 3 50.519 12.043 12.925 1 88.84 ? C2B HEM 200 B 1 HETATM 17 C C3B HEM . . . G 3 51.15 11.907 11.752 1 14.01 ? C3B HEM 200 B 1 HETATM 18 C C4B HEM . . . G 3 52.068 13.011 11.597 1 1 ? C4B HEM 200 B 1 HETATM 19 C CMB HEM . . . G 3 49.44 11.14 13.567 1 28.82 ? CMB HEM 200 B 1 HETATM 20 C CAB HEM . . . G 3 50.988 10.805 10.681 1 33.84 ? CAB HEM 200 B 1 HETATM 21 C CBB HEM . . . G 3 51.178 11.119 9.397 1 23.77 ? CBB HEM 200 B 1 HETATM 22 C C1C HEM . . . G 3 53.938 14.169 10.448 1 78.69 ? C1C HEM 200 B 1 HETATM 23 C C2C HEM . . . G 3 54.921 14.301 9.387 1 40.11 ? C2C HEM 200 B 1 HETATM 24 C C3C HEM . . . G 3 55.72 15.32 9.716 1 22.87 ? C3C HEM 200 B 1 HETATM 25 C C4C HEM . . . G 3 55.277 15.87 10.98 1 15.99 ? C4C HEM 200 B 1 HETATM 26 C CMC HEM . . . G 3 54.984 13.395 8.138 1 9.11 ? CMC HEM 200 B 1 HETATM 27 C CAC HEM . . . G 3 56.917 15.912 8.952 1 11.66 ? CAC HEM 200 B 1 HETATM 28 C CBC HEM . . . G 3 57.779 15.085 8.344 1 42.35 ? CBC HEM 200 B 1 HETATM 29 C C1D HEM . . . G 3 55.355 17.543 12.799 1 59.65 ? C1D HEM 200 B 1 HETATM 30 C C2D HEM . . . G 3 55.958 18.668 13.488 1 27.01 ? C2D HEM 200 B 1 HETATM 31 C C3D HEM . . . G 3 55.196 18.905 14.552 1 41.57 ? C3D HEM 200 B 1 HETATM 32 C C4D HEM . . . G 3 54.115 17.929 14.59 1 24.18 ? C4D HEM 200 B 1 HETATM 33 C CMD HEM . . . G 3 57.172 19.597 13.116 1 99.63 ? CMD HEM 200 B 1 HETATM 34 C CAD HEM . . . G 3 55.431 19.979 15.628 1 50.42 ? CAD HEM 200 B 1 HETATM 35 C CBD HEM . . . G 3 54.306 20.337 16.623 1 100 ? CBD HEM 200 B 1 HETATM 36 C CGD HEM . . . G 3 54.84 20.684 17.983 1 100 ? CGD HEM 200 B 1 HETATM 37 O O1D HEM . . . G 3 54.04 21.234 18.794 1 100 ? O1D HEM 200 B 1 HETATM 38 O O2D HEM . . . G 3 56.047 20.406 18.195 1 93.84 ? O2D HEM 200 B 1 HETATM 39 N NA HEM . . . G 3 52.074 15.727 14.787 1 63.88 ? NA HEM 200 B 1 HETATM 40 N NB HEM . . . G 3 51.991 13.813 12.726 1 22.87 ? NB HEM 200 B 1 HETATM 41 N NC HEM . . . G 3 54.169 15.158 11.393 1 1 ? NC HEM 200 B 1 HETATM 42 N ND HEM . . . G 3 54.289 17.039 13.536 1 39.29 ? ND HEM 200 B 1 HETATM 43 FE FE HEM . . . G 3 53.11 15.471 13.073 1 33.4 ? FE HEM 200 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #