data_1HBK
#
_model_server_result.job_id            Lpz-XI-d5CIGWodP0B5IFQ 
_model_server_result.datetime_utc      '2024-11-06 17:47:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1hbk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1089}' 
#
_entry.id    1HBK 
#
_exptl.entry_id    1HBK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              767.534 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COENZYME A' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1HBK 
_cell.length_a            48.665 
_cell.length_b            48.665 
_cell.length_c            48.411 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1HBK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A ND1 HIS 1 A HIS 0 1_555 E NI NI . A NI 1092 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? 
metalc ? metalc2 A N HIS 1 A HIS 0 1_555 E NI NI . A NI 1092 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
metalc ? metalc3 A OE2 GLU 8 A GLU 7 3_554 D NI NI . A NI 1091 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc4 A NE2 HIS 50 A HIS 49 1_555 D NI NI . A NI 1091 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.877 ? 
metalc ? metalc5 D NI NI . A NI 1091 1_555 F O HOH . A HOH 2008 3_554 ? ? ? ? ? ? ? ? ? ? ? ? 1.739 ? 
metalc ? metalc6 D NI NI . A NI 1091 1_555 F O HOH . A HOH 2009 3_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc7 D NI NI . A NI 1091 1_555 F O HOH . A HOH 2038 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc8 E NI NI . A NI 1092 1_555 F O HOH . A HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.78 ? 
metalc ? metalc9 E NI NI . A NI 1092 1_555 F O HOH . A HOH 2043 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? 
metalc ? metalc10 E NI NI . A NI 1092 1_555 F O HOH . A HOH 2071 4_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? 
metalc ? metalc11 E NI NI . A NI 1092 1_555 F O HOH . A HOH 2076 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
#
_chem_comp.formula           'C21 H36 N7 O16 P3 S' 
_chem_comp.formula_weight    767.534 
_chem_comp.id                COA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COENZYME A' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1A C2A COA sing 70 n y 
N1A C6A COA doub 71 n y 
C2A N3A COA doub 72 n y 
C2A H2A COA sing 73 n n 
N3A C4A COA sing 74 n y 
C4A C5A COA doub 75 n y 
C4A N9A COA sing 76 n y 
C5A C6A COA sing 77 n y 
C5A N7A COA sing 78 n y 
C6A N6A COA sing 79 n n 
N6A H61A COA sing 80 n n 
N6A H62A COA sing 81 n n 
N7A C8A COA doub 82 n y 
C8A N9A COA sing 83 n y 
C8A H8A COA sing 84 n n 
N9A C1B COA sing 85 n n 
C1B C2B COA sing 86 n n 
C1B O4B COA sing 87 n n 
C1B H1B COA sing 88 n n 
C2B O2B COA sing 89 n n 
C2B C3B COA sing 90 n n 
C2B H2B COA sing 91 n n 
O2B HO2A COA sing 92 n n 
C3B O3B COA sing 93 n n 
C3B C4B COA sing 94 n n 
C3B H3B COA sing 95 n n 
O3B P3B COA sing 96 n n 
P3B O7A COA doub 97 n n 
P3B O8A COA sing 98 n n 
P3B O9A COA sing 99 n n 
O8A HOA8 COA sing 100 n n 
O9A HOA9 COA sing 101 n n 
C4B O4B COA sing 102 n n 
C4B C5B COA sing 103 n n 
C4B H4B COA sing 104 n n 
C5B O5B COA sing 105 n n 
C5B H51A COA sing 106 n n 
C5B H52A COA sing 107 n n 
O5B P1A COA sing 108 n n 
P1A O1A COA doub 109 n n 
P1A O2A COA sing 110 n n 
P1A O3A COA sing 111 n n 
O2A HOA2 COA sing 112 n n 
O3A P2A COA sing 113 n n 
P2A O4A COA doub 114 n n 
P2A O5A COA sing 115 n n 
P2A O6A COA sing 116 n n 
O5A HOA5 COA sing 117 n n 
O6A CCP COA sing 118 n n 
CBP CCP COA sing 119 n n 
CBP CDP COA sing 120 n n 
CBP CEP COA sing 121 n n 
CBP CAP COA sing 122 n n 
CCP H121 COA sing 123 n n 
CCP H122 COA sing 124 n n 
CDP H131 COA sing 125 n n 
CDP H132 COA sing 126 n n 
CDP H133 COA sing 127 n n 
CEP H141 COA sing 128 n n 
CEP H142 COA sing 129 n n 
CEP H143 COA sing 130 n n 
CAP OAP COA sing 131 n n 
CAP C9P COA sing 132 n n 
CAP H10 COA sing 133 n n 
OAP HO1 COA sing 134 n n 
C9P O9P COA doub 135 n n 
C9P N8P COA sing 136 n n 
N8P C7P COA sing 137 n n 
N8P HN8 COA sing 138 n n 
C7P C6P COA sing 139 n n 
C7P H71 COA sing 140 n n 
C7P H72 COA sing 141 n n 
C6P C5P COA sing 142 n n 
C6P H61 COA sing 143 n n 
C6P H62 COA sing 144 n n 
C5P O5P COA doub 145 n n 
C5P N4P COA sing 146 n n 
N4P C3P COA sing 147 n n 
N4P HN4 COA sing 148 n n 
C3P C2P COA sing 149 n n 
C3P H31 COA sing 150 n n 
C3P H32 COA sing 151 n n 
C2P S1P COA sing 152 n n 
C2P H21 COA sing 153 n n 
C2P H22 COA sing 154 n n 
S1P HS1 COA sing 155 n n 
#
_atom_sites.entry_id                     1HBK 
_atom_sites.fract_transf_matrix[1][1]    0.020549 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020549 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020656 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 COA A 1 1089 1089 COA COA . 
C 3 MYR A 1 1090 1090 MYR MYR . 
D 4 NI A 1 1091 1091 NI NI . 
E 4 NI A 1 1092 1092 NI NI . 
F 5 HOH A 1 2001 2001 HOH HOH . 
F 5 HOH A 2 2002 2002 HOH HOH . 
F 5 HOH A 3 2003 2003 HOH HOH . 
F 5 HOH A 4 2004 2004 HOH HOH . 
F 5 HOH A 5 2005 2005 HOH HOH . 
F 5 HOH A 6 2006 2006 HOH HOH . 
F 5 HOH A 7 2007 2007 HOH HOH . 
F 5 HOH A 8 2008 2008 HOH HOH . 
F 5 HOH A 9 2009 2009 HOH HOH . 
F 5 HOH A 10 2010 2010 HOH HOH . 
F 5 HOH A 11 2011 2011 HOH HOH . 
F 5 HOH A 12 2012 2012 HOH HOH . 
F 5 HOH A 13 2013 2013 HOH HOH . 
F 5 HOH A 14 2014 2014 HOH HOH . 
F 5 HOH A 15 2015 2015 HOH HOH . 
F 5 HOH A 16 2016 2016 HOH HOH . 
F 5 HOH A 17 2017 2017 HOH HOH . 
F 5 HOH A 18 2018 2018 HOH HOH . 
F 5 HOH A 19 2019 2019 HOH HOH . 
F 5 HOH A 20 2020 2020 HOH HOH . 
F 5 HOH A 21 2021 2021 HOH HOH . 
F 5 HOH A 22 2022 2022 HOH HOH . 
F 5 HOH A 23 2023 2023 HOH HOH . 
F 5 HOH A 24 2024 2024 HOH HOH . 
F 5 HOH A 25 2025 2025 HOH HOH . 
F 5 HOH A 26 2026 2026 HOH HOH . 
F 5 HOH A 27 2027 2027 HOH HOH . 
F 5 HOH A 28 2028 2028 HOH HOH . 
F 5 HOH A 29 2029 2029 HOH HOH . 
F 5 HOH A 30 2030 2030 HOH HOH . 
F 5 HOH A 31 2031 2031 HOH HOH . 
F 5 HOH A 32 2032 2032 HOH HOH . 
F 5 HOH A 33 2033 2033 HOH HOH . 
F 5 HOH A 34 2034 2034 HOH HOH . 
F 5 HOH A 35 2035 2035 HOH HOH . 
F 5 HOH A 36 2036 2036 HOH HOH . 
F 5 HOH A 37 2037 2037 HOH HOH . 
F 5 HOH A 38 2038 2038 HOH HOH . 
F 5 HOH A 39 2039 2039 HOH HOH . 
F 5 HOH A 40 2040 2040 HOH HOH . 
F 5 HOH A 41 2041 2041 HOH HOH . 
F 5 HOH A 42 2042 2042 HOH HOH . 
F 5 HOH A 43 2043 2043 HOH HOH . 
F 5 HOH A 44 2044 2044 HOH HOH . 
F 5 HOH A 45 2045 2045 HOH HOH . 
F 5 HOH A 46 2046 2046 HOH HOH . 
F 5 HOH A 47 2047 2047 HOH HOH . 
F 5 HOH A 48 2048 2048 HOH HOH . 
F 5 HOH A 49 2049 2049 HOH HOH . 
F 5 HOH A 50 2050 2050 HOH HOH . 
F 5 HOH A 51 2051 2051 HOH HOH . 
F 5 HOH A 52 2052 2052 HOH HOH . 
F 5 HOH A 53 2053 2053 HOH HOH . 
F 5 HOH A 54 2054 2054 HOH HOH . 
F 5 HOH A 55 2055 2055 HOH HOH . 
F 5 HOH A 56 2056 2056 HOH HOH . 
F 5 HOH A 57 2057 2057 HOH HOH . 
F 5 HOH A 58 2058 2058 HOH HOH . 
F 5 HOH A 59 2059 2059 HOH HOH . 
F 5 HOH A 60 2060 2060 HOH HOH . 
F 5 HOH A 61 2061 2061 HOH HOH . 
F 5 HOH A 62 2062 2062 HOH HOH . 
F 5 HOH A 63 2063 2063 HOH HOH . 
F 5 HOH A 64 2064 2064 HOH HOH . 
F 5 HOH A 65 2065 2065 HOH HOH . 
F 5 HOH A 66 2066 2066 HOH HOH . 
F 5 HOH A 67 2067 2067 HOH HOH . 
F 5 HOH A 68 2068 2068 HOH HOH . 
F 5 HOH A 69 2069 2069 HOH HOH . 
F 5 HOH A 70 2070 2070 HOH HOH . 
F 5 HOH A 71 2071 2071 HOH HOH . 
F 5 HOH A 72 2072 2072 HOH HOH . 
F 5 HOH A 73 2073 2073 HOH HOH . 
F 5 HOH A 74 2074 2074 HOH HOH . 
F 5 HOH A 75 2075 2075 HOH HOH . 
F 5 HOH A 76 2076 2076 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1A COA . . . B 2 -0.049 20.603 20.236 1 26.89 ? N1A COA 1089 A 1 
HETATM 2 C C2A COA . . . B 2 -1.338 20.476 20.567 1 27.76 ? C2A COA 1089 A 1 
HETATM 3 N N3A COA . . . B 2 -2.385 21.206 20.165 1 28.29 ? N3A COA 1089 A 1 
HETATM 4 C C4A COA . . . B 2 -1.995 22.174 19.309 1 30.2 ? C4A COA 1089 A 1 
HETATM 5 C C5A COA . . . B 2 -0.709 22.427 18.879 1 29.26 ? C5A COA 1089 A 1 
HETATM 6 C C6A COA . . . B 2 0.306 21.588 19.377 1 28.04 ? C6A COA 1089 A 1 
HETATM 7 N N6A COA . . . B 2 1.598 21.716 19.037 1 26.6 ? N6A COA 1089 A 1 
HETATM 8 N N7A COA . . . B 2 -0.691 23.5 17.994 1 30.39 ? N7A COA 1089 A 1 
HETATM 9 C C8A COA . . . B 2 -1.948 23.864 17.91 1 30.33 ? C8A COA 1089 A 1 
HETATM 10 N N9A COA . . . B 2 -2.791 23.097 18.665 1 30.78 ? N9A COA 1089 A 1 
HETATM 11 C C1B COA . . . B 2 -4.237 23.151 18.794 1 30.9 ? C1B COA 1089 A 1 
HETATM 12 C C2B COA . . . B 2 -5.001 24.427 18.409 1 33.05 ? C2B COA 1089 A 1 
HETATM 13 O O2B COA . . . B 2 -5.117 25.283 19.524 1 32.32 ? O2B COA 1089 A 1 
HETATM 14 C C3B COA . . . B 2 -6.351 23.866 17.9 1 34.69 ? C3B COA 1089 A 1 
HETATM 15 O O3B COA . . . B 2 -7.222 23.905 19.033 1 34.83 ? O3B COA 1089 A 1 
HETATM 16 P P3B COA . . . B 2 -8.684 24.551 18.967 1 34.81 ? P3B COA 1089 A 1 
HETATM 17 O O7A COA . . . B 2 -9.256 24.177 20.276 1 35.42 ? O7A COA 1089 A 1 
HETATM 18 O O8A COA . . . B 2 -9.353 24.128 17.722 1 37.74 ? O8A COA 1089 A 1 
HETATM 19 O O9A COA . . . B 2 -8.433 26.118 19.005 1 39.9 ? O9A COA 1089 A 1 
HETATM 20 C C4B COA . . . B 2 -6.116 22.369 17.711 1 37.82 ? C4B COA 1089 A 1 
HETATM 21 O O4B COA . . . B 2 -4.758 22.085 18.053 1 34.37 ? O4B COA 1089 A 1 
HETATM 22 C C5B COA . . . B 2 -6.408 21.82 16.332 1 42.42 ? C5B COA 1089 A 1 
HETATM 23 O O5B COA . . . B 2 -7.789 21.956 16.016 1 52.76 ? O5B COA 1089 A 1 
HETATM 24 P P1A COA . . . B 2 -8.262 22.15 14.507 1 55.26 ? P1A COA 1089 A 1 
HETATM 25 O O1A COA . . . B 2 -9.538 21.424 14.311 1 57.92 ? O1A COA 1089 A 1 
HETATM 26 O O2A COA . . . B 2 -8.214 23.599 14.229 1 57.6 ? O2A COA 1089 A 1 
HETATM 27 O O3A COA . . . B 2 -7.165 21.438 13.607 1 57.85 ? O3A COA 1089 A 1 
HETATM 28 P P2A COA . . . B 2 -7.447 19.999 13.009 1 60.25 ? P2A COA 1089 A 1 
HETATM 29 O O4A COA . . . B 2 -8.275 19.328 14.038 1 60.02 ? O4A COA 1089 A 1 
HETATM 30 O O5A COA . . . B 2 -6.156 19.385 12.594 1 60.55 ? O5A COA 1089 A 1 
HETATM 31 O O6A COA . . . B 2 -8.328 20.23 11.702 1 59.87 ? O6A COA 1089 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#