data_1HCK
#
_model_server_result.job_id            QazHyr9eLaoTIXrv8Re7Sw 
_model_server_result.datetime_utc      '2024-11-05 03:55:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1hck 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":400}' 
#
_entry.id    1HCK 
#
_exptl.entry_id    1HCK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1HCK 
_cell.length_a            72.82 
_cell.length_b            72.66 
_cell.length_c            54.07 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1HCK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 132 A ASN 132 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? 
metalc ? metalc2 A OD2 ASP 145 A ASP 145 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
metalc ? metalc3 C O1G ATP . A ATP 400 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.886 ? 
metalc ? metalc4 C O2B ATP . A ATP 400 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? 
metalc ? metalc5 C O1A ATP . A ATP 400 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.821 ? 
metalc ? metalc6 B MG MG . A MG 401 1_555 D O HOH . A HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     1HCK 
_atom_sites.fract_transf_matrix[1][1]    0.013732 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013763 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018495 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 401 401 MG MG . 
C 3 ATP A 1 400 400 ATP ATP . 
D 4 HOH A 1 501 501 HOH HOH . 
D 4 HOH A 2 502 502 HOH HOH . 
D 4 HOH A 3 503 503 HOH HOH . 
D 4 HOH A 4 504 504 HOH HOH . 
D 4 HOH A 5 505 505 HOH HOH . 
D 4 HOH A 6 506 506 HOH HOH . 
D 4 HOH A 7 507 507 HOH HOH . 
D 4 HOH A 8 508 508 HOH HOH . 
D 4 HOH A 9 509 509 HOH HOH . 
D 4 HOH A 10 510 510 HOH HOH . 
D 4 HOH A 11 511 511 HOH HOH . 
D 4 HOH A 12 512 512 HOH HOH . 
D 4 HOH A 13 513 513 HOH HOH . 
D 4 HOH A 14 514 514 HOH HOH . 
D 4 HOH A 15 515 515 HOH HOH . 
D 4 HOH A 16 516 516 HOH HOH . 
D 4 HOH A 17 517 517 HOH HOH . 
D 4 HOH A 18 518 518 HOH HOH . 
D 4 HOH A 19 519 519 HOH HOH . 
D 4 HOH A 20 520 520 HOH HOH . 
D 4 HOH A 21 521 521 HOH HOH . 
D 4 HOH A 22 522 522 HOH HOH . 
D 4 HOH A 23 523 523 HOH HOH . 
D 4 HOH A 24 524 524 HOH HOH . 
D 4 HOH A 25 525 525 HOH HOH . 
D 4 HOH A 26 526 526 HOH HOH . 
D 4 HOH A 27 527 527 HOH HOH . 
D 4 HOH A 28 528 528 HOH HOH . 
D 4 HOH A 29 529 529 HOH HOH . 
D 4 HOH A 30 530 530 HOH HOH . 
D 4 HOH A 31 531 531 HOH HOH . 
D 4 HOH A 32 532 532 HOH HOH . 
D 4 HOH A 33 533 533 HOH HOH . 
D 4 HOH A 34 534 534 HOH HOH . 
D 4 HOH A 35 535 535 HOH HOH . 
D 4 HOH A 36 536 536 HOH HOH . 
D 4 HOH A 37 537 537 HOH HOH . 
D 4 HOH A 38 538 538 HOH HOH . 
D 4 HOH A 39 539 539 HOH HOH . 
D 4 HOH A 40 540 540 HOH HOH . 
D 4 HOH A 41 541 541 HOH HOH . 
D 4 HOH A 42 542 542 HOH HOH . 
D 4 HOH A 43 543 543 HOH HOH . 
D 4 HOH A 44 544 544 HOH HOH . 
D 4 HOH A 45 545 545 HOH HOH . 
D 4 HOH A 46 546 546 HOH HOH . 
D 4 HOH A 47 547 547 HOH HOH . 
D 4 HOH A 48 548 548 HOH HOH . 
D 4 HOH A 49 549 549 HOH HOH . 
D 4 HOH A 50 550 550 HOH HOH . 
D 4 HOH A 51 551 551 HOH HOH . 
D 4 HOH A 52 552 552 HOH HOH . 
D 4 HOH A 53 553 553 HOH HOH . 
D 4 HOH A 54 554 554 HOH HOH . 
D 4 HOH A 55 555 555 HOH HOH . 
D 4 HOH A 56 556 556 HOH HOH . 
D 4 HOH A 57 557 557 HOH HOH . 
D 4 HOH A 58 558 558 HOH HOH . 
D 4 HOH A 59 559 559 HOH HOH . 
D 4 HOH A 60 560 560 HOH HOH . 
D 4 HOH A 61 561 561 HOH HOH . 
D 4 HOH A 62 562 562 HOH HOH . 
D 4 HOH A 63 563 563 HOH HOH . 
D 4 HOH A 64 564 564 HOH HOH . 
D 4 HOH A 65 565 565 HOH HOH . 
D 4 HOH A 66 566 566 HOH HOH . 
D 4 HOH A 67 567 567 HOH HOH . 
D 4 HOH A 68 568 568 HOH HOH . 
D 4 HOH A 69 569 569 HOH HOH . 
D 4 HOH A 70 570 570 HOH HOH . 
D 4 HOH A 71 571 571 HOH HOH . 
D 4 HOH A 72 572 572 HOH HOH . 
D 4 HOH A 73 573 573 HOH HOH . 
D 4 HOH A 74 574 574 HOH HOH . 
D 4 HOH A 75 575 575 HOH HOH . 
D 4 HOH A 76 576 576 HOH HOH . 
D 4 HOH A 77 577 577 HOH HOH . 
D 4 HOH A 78 578 578 HOH HOH . 
D 4 HOH A 79 579 579 HOH HOH . 
D 4 HOH A 80 580 580 HOH HOH . 
D 4 HOH A 81 581 581 HOH HOH . 
D 4 HOH A 82 582 582 HOH HOH . 
D 4 HOH A 83 583 583 HOH HOH . 
D 4 HOH A 84 584 584 HOH HOH . 
D 4 HOH A 85 585 585 HOH HOH . 
D 4 HOH A 86 586 586 HOH HOH . 
D 4 HOH A 87 587 587 HOH HOH . 
D 4 HOH A 88 588 588 HOH HOH . 
D 4 HOH A 89 589 589 HOH HOH . 
D 4 HOH A 90 590 590 HOH HOH . 
D 4 HOH A 91 591 591 HOH HOH . 
D 4 HOH A 92 592 592 HOH HOH . 
D 4 HOH A 93 593 593 HOH HOH . 
D 4 HOH A 94 594 594 HOH HOH . 
D 4 HOH A 95 595 595 HOH HOH . 
D 4 HOH A 96 596 596 HOH HOH . 
D 4 HOH A 97 597 597 HOH HOH . 
D 4 HOH A 98 598 598 HOH HOH . 
D 4 HOH A 99 599 599 HOH HOH . 
D 4 HOH A 100 600 600 HOH HOH . 
D 4 HOH A 101 601 601 HOH HOH . 
D 4 HOH A 102 602 602 HOH HOH . 
D 4 HOH A 103 603 603 HOH HOH . 
D 4 HOH A 104 604 604 HOH HOH . 
D 4 HOH A 105 605 605 HOH HOH . 
D 4 HOH A 106 606 606 HOH HOH . 
D 4 HOH A 107 607 607 HOH HOH . 
D 4 HOH A 108 608 608 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . C 3 98.899 93.299 85.116 1 56.62 ? PG ATP 400 A 1 
HETATM 2 O O1G ATP . . . C 3 100.411 93.461 84.505 1 61.42 ? O1G ATP 400 A 1 
HETATM 3 O O2G ATP . . . C 3 98.501 94.433 86.055 1 57.35 ? O2G ATP 400 A 1 
HETATM 4 O O3G ATP . . . C 3 98.684 92.024 85.573 1 57.62 ? O3G ATP 400 A 1 
HETATM 5 P PB ATP . . . C 3 98.111 94.683 82.367 1 53.17 ? PB ATP 400 A 1 
HETATM 6 O O1B ATP . . . C 3 97.186 94.435 81.173 1 54.96 ? O1B ATP 400 A 1 
HETATM 7 O O2B ATP . . . C 3 99.585 94.672 81.909 1 58.07 ? O2B ATP 400 A 1 
HETATM 8 O O3B ATP . . . C 3 97.952 93.608 83.759 1 53.99 ? O3B ATP 400 A 1 
HETATM 9 P PA ATP . . . C 3 99.218 96.994 83.821 1 45.52 ? PA ATP 400 A 1 
HETATM 10 O O1A ATP . . . C 3 100.48 96.308 83.814 1 34.47 ? O1A ATP 400 A 1 
HETATM 11 O O2A ATP . . . C 3 98.668 97.616 85.038 1 42.48 ? O2A ATP 400 A 1 
HETATM 12 O O3A ATP . . . C 3 98.12 96.209 83.034 1 50.69 ? O3A ATP 400 A 1 
HETATM 13 O O5' ATP . . . C 3 99.391 97.948 82.575 1 43.48 ? O5' ATP 400 A 1 
HETATM 14 C C5' ATP . . . C 3 98.277 98.694 82.134 1 39.42 ? C5' ATP 400 A 1 
HETATM 15 C C4' ATP . . . C 3 98.357 99.23 80.821 1 36.99 ? C4' ATP 400 A 1 
HETATM 16 O O4' ATP . . . C 3 99.434 100.181 80.845 1 32.13 ? O4' ATP 400 A 1 
HETATM 17 C C3' ATP . . . C 3 98.632 98.2 79.659 1 39.09 ? C3' ATP 400 A 1 
HETATM 18 O O3' ATP . . . C 3 98.617 98.925 78.377 1 49.35 ? O3' ATP 400 A 1 
HETATM 19 C C2' ATP . . . C 3 100.16 98.143 79.772 1 38.93 ? C2' ATP 400 A 1 
HETATM 20 O O2' ATP . . . C 3 100.685 97.572 78.585 1 41.77 ? O2' ATP 400 A 1 
HETATM 21 C C1' ATP . . . C 3 100.432 99.749 79.944 1 30.56 ? C1' ATP 400 A 1 
HETATM 22 N N9 ATP . . . C 3 101.694 99.886 80.561 1 23.28 ? N9 ATP 400 A 1 
HETATM 23 C C8 ATP . . . C 3 102.297 99.089 81.55 1 19.33 ? C8 ATP 400 A 1 
HETATM 24 N N7 ATP . . . C 3 103.542 99.421 81.887 1 24.44 ? N7 ATP 400 A 1 
HETATM 25 C C5 ATP . . . C 3 103.915 100.451 80.875 1 22.15 ? C5 ATP 400 A 1 
HETATM 26 C C6 ATP . . . C 3 105.101 101.203 80.581 1 20.25 ? C6 ATP 400 A 1 
HETATM 27 N N6 ATP . . . C 3 106.241 101.076 81.186 1 24.16 ? N6 ATP 400 A 1 
HETATM 28 N N1 ATP . . . C 3 104.937 102.135 79.591 1 22.35 ? N1 ATP 400 A 1 
HETATM 29 C C2 ATP . . . C 3 103.853 102.359 78.899 1 24.73 ? C2 ATP 400 A 1 
HETATM 30 N N3 ATP . . . C 3 102.673 101.843 79.137 1 25.23 ? N3 ATP 400 A 1 
HETATM 31 C C4 ATP . . . C 3 102.719 100.782 80.097 1 23.86 ? C4 ATP 400 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           31 
#