data_1HCN # _model_server_result.job_id xLhQCRnXgvHBqLEFCgdT1w _model_server_result.datetime_utc '2024-10-24 04:20:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hcn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":93}' # _entry.id 1HCN # _exptl.entry_id 1HCN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1HCN _cell.length_a 85.1 _cell.length_b 85.1 _cell.length_c 177.7 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HCN _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 42.55 73.698762 29.616667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 7 1_555 A SG CYS 31 A CYS 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf2 A SG CYS 10 A CYS 10 1_555 A SG CYS 60 A CYS 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 28 A CYS 28 1_555 A SG CYS 82 A CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf4 A SG CYS 32 A CYS 32 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf5 A SG CYS 59 A CYS 59 1_555 A SG CYS 87 A CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf6 B SG CYS 9 B CYS 9 1_555 B SG CYS 57 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf7 B SG CYS 23 B CYS 23 1_555 B SG CYS 72 B CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf8 B SG CYS 26 B CYS 26 1_555 B SG CYS 110 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf9 B SG CYS 34 B CYS 34 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf10 B SG CYS 38 B CYS 38 1_555 B SG CYS 90 B CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf11 B SG CYS 93 B CYS 93 1_555 B SG CYS 100 B CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 A ND2 ASN 52 A ASN 52 1_555 C C1 NAG . A NAG 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale2 A ND2 ASN 78 A ASN 78 1_555 D C1 NAG . A NAG 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms ? # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 1HCN _atom_sites.fract_transf_matrix[1][1] 0.011751 _atom_sites.fract_transf_matrix[1][2] 0.006784 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013569 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005627 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG A 1 93 52 NAG NAG . D 3 NAG A 1 94 78 NAG NAG . E 4 HOH A 1 302 302 HOH HOH . E 4 HOH A 2 307 307 HOH HOH . E 4 HOH A 3 309 309 HOH HOH . E 4 HOH A 4 313 313 HOH HOH . E 4 HOH A 5 319 319 HOH HOH . E 4 HOH A 6 320 320 HOH HOH . E 4 HOH A 7 321 321 HOH HOH . E 4 HOH A 8 323 323 HOH HOH . E 4 HOH A 9 325 325 HOH HOH . E 4 HOH A 10 326 326 HOH HOH . E 4 HOH A 11 331 331 HOH HOH . E 4 HOH A 12 334 334 HOH HOH . E 4 HOH A 13 338 338 HOH HOH . E 4 HOH A 14 339 339 HOH HOH . E 4 HOH A 15 343 343 HOH HOH . E 4 HOH A 16 345 345 HOH HOH . E 4 HOH A 17 346 346 HOH HOH . E 4 HOH A 18 347 347 HOH HOH . E 4 HOH A 19 348 348 HOH HOH . E 4 HOH A 20 350 350 HOH HOH . E 4 HOH A 21 353 353 HOH HOH . E 4 HOH A 22 355 355 HOH HOH . E 4 HOH A 23 356 356 HOH HOH . F 4 HOH B 1 301 301 HOH HOH . F 4 HOH B 2 303 303 HOH HOH . F 4 HOH B 3 304 304 HOH HOH . F 4 HOH B 4 305 305 HOH HOH . F 4 HOH B 5 306 306 HOH HOH . F 4 HOH B 6 308 308 HOH HOH . F 4 HOH B 7 310 310 HOH HOH . F 4 HOH B 8 311 311 HOH HOH . F 4 HOH B 9 312 312 HOH HOH . F 4 HOH B 10 314 314 HOH HOH . F 4 HOH B 11 315 315 HOH HOH . F 4 HOH B 12 316 316 HOH HOH . F 4 HOH B 13 317 317 HOH HOH . F 4 HOH B 14 318 318 HOH HOH . F 4 HOH B 15 322 322 HOH HOH . F 4 HOH B 16 324 324 HOH HOH . F 4 HOH B 17 327 327 HOH HOH . F 4 HOH B 18 328 328 HOH HOH . F 4 HOH B 19 329 329 HOH HOH . F 4 HOH B 20 330 330 HOH HOH . F 4 HOH B 21 332 332 HOH HOH . F 4 HOH B 22 333 333 HOH HOH . F 4 HOH B 23 335 335 HOH HOH . F 4 HOH B 24 336 336 HOH HOH . F 4 HOH B 25 337 337 HOH HOH . F 4 HOH B 26 340 340 HOH HOH . F 4 HOH B 27 341 341 HOH HOH . F 4 HOH B 28 342 342 HOH HOH . F 4 HOH B 29 344 344 HOH HOH . F 4 HOH B 30 349 349 HOH HOH . F 4 HOH B 31 351 351 HOH HOH . F 4 HOH B 32 352 352 HOH HOH . F 4 HOH B 33 354 354 HOH HOH . F 4 HOH B 34 357 357 HOH HOH . F 4 HOH B 35 358 358 HOH HOH . F 4 HOH B 36 359 359 HOH HOH . F 4 HOH B 37 360 360 HOH HOH . F 4 HOH B 38 361 361 HOH HOH . F 4 HOH B 39 362 362 HOH HOH . F 4 HOH B 40 363 363 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . C 3 4.783 33.953 -13.442 1 53.2 ? C1 NAG 93 A 1 HETATM 2 C C2 NAG . . . C 3 5.926 33.817 -14.437 1 54 ? C2 NAG 93 A 1 HETATM 3 C C3 NAG . . . C 3 6.698 35.103 -14.461 1 63.16 ? C3 NAG 93 A 1 HETATM 4 C C4 NAG . . . C 3 5.759 36.23 -14.865 1 69.56 ? C4 NAG 93 A 1 HETATM 5 C C5 NAG . . . C 3 4.575 36.304 -13.883 1 66.59 ? C5 NAG 93 A 1 HETATM 6 C C6 NAG . . . C 3 3.51 37.301 -14.347 1 71.63 ? C6 NAG 93 A 1 HETATM 7 C C7 NAG . . . C 3 6.584 31.472 -14.335 1 43.93 ? C7 NAG 93 A 1 HETATM 8 C C8 NAG . . . C 3 7.603 30.502 -13.755 1 39.83 ? C8 NAG 93 A 1 HETATM 9 N N2 NAG . . . C 3 6.797 32.742 -14.016 1 47.66 ? N2 NAG 93 A 1 HETATM 10 O O3 NAG . . . C 3 7.762 34.991 -15.391 1 72.89 ? O3 NAG 93 A 1 HETATM 11 O O4 NAG . . . C 3 6.47 37.463 -14.881 1 76.08 ? O4 NAG 93 A 1 HETATM 12 O O5 NAG . . . C 3 3.915 35.024 -13.806 1 59.68 ? O5 NAG 93 A 1 HETATM 13 O O6 NAG . . . C 3 2.894 36.89 -15.576 1 73.18 ? O6 NAG 93 A 1 HETATM 14 O O7 NAG . . . C 3 5.642 31.117 -15.041 1 41.69 ? O7 NAG 93 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #