data_1HCO # _model_server_result.job_id hw8D1Aw2R5feqE3g5355GA _model_server_result.datetime_utc '2024-11-16 22:21:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hco # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":200}' # _entry.id 1HCO # _exptl.entry_id 1HCO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1HCO _cell.length_a 53.7 _cell.length_b 53.7 _cell.length_c 193 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HCO _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 C FE HEM . A HEM 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc2 B NE2 HIS 92 B HIS 92 1_555 E FE HEM . B HEM 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.803 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 130 n n CHA C4D HEM doub 131 n n CHA HHA HEM sing 132 n n CHB C4A HEM sing 133 n n CHB C1B HEM doub 134 n n CHB HHB HEM sing 135 n n CHC C4B HEM sing 136 n n CHC C1C HEM doub 137 n n CHC HHC HEM sing 138 n n CHD C4C HEM doub 139 n n CHD C1D HEM sing 140 n n CHD HHD HEM sing 141 n n C1A C2A HEM doub 142 n y C1A NA HEM sing 143 n y C2A C3A HEM sing 144 n y C2A CAA HEM sing 145 n n C3A C4A HEM doub 146 n y C3A CMA HEM sing 147 n n C4A NA HEM sing 148 n y CMA HMA HEM sing 149 n n CMA HMAA HEM sing 150 n n CMA HMAB HEM sing 151 n n CAA CBA HEM sing 152 n n CAA HAA HEM sing 153 n n CAA HAAA HEM sing 154 n n CBA CGA HEM sing 155 n n CBA HBA HEM sing 156 n n CBA HBAA HEM sing 157 n n CGA O1A HEM doub 158 n n CGA O2A HEM sing 159 n n C1B C2B HEM sing 160 n n C1B NB HEM sing 161 n n C2B C3B HEM doub 162 n n C2B CMB HEM sing 163 n n C3B C4B HEM sing 164 n n C3B CAB HEM sing 165 n n C4B NB HEM doub 166 n n CMB HMB HEM sing 167 n n CMB HMBA HEM sing 168 n n CMB HMBB HEM sing 169 n n CAB CBB HEM doub 170 n n CAB HAB HEM sing 171 n n CBB HBB HEM sing 172 n n CBB HBBA HEM sing 173 n n C1C C2C HEM sing 174 n y C1C NC HEM sing 175 n y C2C C3C HEM doub 176 n y C2C CMC HEM sing 177 n n C3C C4C HEM sing 178 n y C3C CAC HEM sing 179 n n C4C NC HEM sing 180 n y CMC HMC HEM sing 181 n n CMC HMCA HEM sing 182 n n CMC HMCB HEM sing 183 n n CAC CBC HEM doub 184 n n CAC HAC HEM sing 185 n n CBC HBC HEM sing 186 n n CBC HBCA HEM sing 187 n n C1D C2D HEM sing 188 n n C1D ND HEM doub 189 n n C2D C3D HEM doub 190 n n C2D CMD HEM sing 191 n n C3D C4D HEM sing 192 n n C3D CAD HEM sing 193 n n C4D ND HEM sing 194 n n CMD HMD HEM sing 195 n n CMD HMDA HEM sing 196 n n CMD HMDB HEM sing 197 n n CAD CBD HEM sing 198 n n CAD HAD HEM sing 199 n n CAD HADA HEM sing 200 n n CBD CGD HEM sing 201 n n CBD HBD HEM sing 202 n n CBD HBDA HEM sing 203 n n CGD O1D HEM doub 204 n n CGD O2D HEM sing 205 n n O2A H2A HEM sing 206 n n O2D H2D HEM sing 207 n n FE NA HEM sing 208 n n FE NB HEM sing 209 n n FE NC HEM sing 210 n n FE ND HEM sing 211 n n # _atom_sites.entry_id 1HCO _atom_sites.fract_transf_matrix[1][1] 0.018622 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018622 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005181 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HEM A 1 200 1 HEM HEM . D 4 CMO A 1 201 1 CMO HEM . E 3 HEM B 1 200 1 HEM HEM . F 4 CMO B 1 201 1 CMO HEM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . C 3 43.129 28.744 17.487 1 0 ? CHA HEM 200 A 1 HETATM 2 C CHB HEM . . . C 3 41.351 33.053 16.239 1 0 ? CHB HEM 200 A 1 HETATM 3 C CHC HEM . . . C 3 37.912 30.878 13.636 1 0 ? CHC HEM 200 A 1 HETATM 4 C CHD HEM . . . C 3 39.697 26.575 14.885 1 0 ? CHD HEM 200 A 1 HETATM 5 C C1A HEM . . . C 3 42.943 30.104 17.368 1 0 ? C1A HEM 200 A 1 HETATM 6 C C2A HEM . . . C 3 43.778 31.122 18.007 1 0 ? C2A HEM 200 A 1 HETATM 7 C C3A HEM . . . C 3 43.284 32.309 17.662 1 0 ? C3A HEM 200 A 1 HETATM 8 C C4A HEM . . . C 3 42.128 32.078 16.804 1 0 ? C4A HEM 200 A 1 HETATM 9 C CMA HEM . . . C 3 43.83 33.658 18.097 1 0 ? CMA HEM 200 A 1 HETATM 10 C CAA HEM . . . C 3 44.976 30.885 18.891 1 0 ? CAA HEM 200 A 1 HETATM 11 C CBA HEM . . . C 3 46.072 31.925 18.585 1 0 ? CBA HEM 200 A 1 HETATM 12 C CGA HEM . . . C 3 47.428 31.403 19.064 1 0 ? CGA HEM 200 A 1 HETATM 13 O O1A HEM . . . C 3 47.438 30.545 19.968 1 0 ? O1A HEM 200 A 1 HETATM 14 O O2A HEM . . . C 3 48.455 31.847 18.52 1 0 ? O2A HEM 200 A 1 HETATM 15 C C1B HEM . . . C 3 40.261 32.843 15.424 1 0 ? C1B HEM 200 A 1 HETATM 16 C C2B HEM . . . C 3 39.435 33.88 14.834 1 0 ? C2B HEM 200 A 1 HETATM 17 C C3B HEM . . . C 3 38.484 33.276 14.113 1 0 ? C3B HEM 200 A 1 HETATM 18 C C4B HEM . . . C 3 38.684 31.846 14.234 1 0 ? C4B HEM 200 A 1 HETATM 19 C CMB HEM . . . C 3 39.608 35.377 14.99 1 0 ? CMB HEM 200 A 1 HETATM 20 C CAB HEM . . . C 3 37.401 33.977 13.322 1 0 ? CAB HEM 200 A 1 HETATM 21 C CBB HEM . . . C 3 36.68 34.953 13.88 1 0 ? CBB HEM 200 A 1 HETATM 22 C C1C HEM . . . C 3 38.092 29.524 13.751 1 0 ? C1C HEM 200 A 1 HETATM 23 C C2C HEM . . . C 3 37.271 28.507 13.117 1 0 ? C2C HEM 200 A 1 HETATM 24 C C3C HEM . . . C 3 37.765 27.32 13.461 1 0 ? C3C HEM 200 A 1 HETATM 25 C C4C HEM . . . C 3 38.907 27.55 14.314 1 0 ? C4C HEM 200 A 1 HETATM 26 C CMC HEM . . . C 3 36.065 28.737 12.232 1 0 ? CMC HEM 200 A 1 HETATM 27 C CAC HEM . . . C 3 37.213 25.977 13.021 1 0 ? CAC HEM 200 A 1 HETATM 28 C CBC HEM . . . C 3 37.895 24.856 13.266 1 0 ? CBC HEM 200 A 1 HETATM 29 C C1D HEM . . . C 3 40.788 26.786 15.7 1 0 ? C1D HEM 200 A 1 HETATM 30 C C2D HEM . . . C 3 41.606 25.741 16.29 1 0 ? C2D HEM 200 A 1 HETATM 31 C C3D HEM . . . C 3 42.557 26.346 17.01 1 0 ? C3D HEM 200 A 1 HETATM 32 C C4D HEM . . . C 3 42.352 27.782 16.884 1 0 ? C4D HEM 200 A 1 HETATM 33 C CMD HEM . . . C 3 41.434 24.245 16.134 1 0 ? CMD HEM 200 A 1 HETATM 34 C CAD HEM . . . C 3 43.641 25.644 17.802 1 0 ? CAD HEM 200 A 1 HETATM 35 C CBD HEM . . . C 3 43.013 25.07 19.029 1 0 ? CBD HEM 200 A 1 HETATM 36 C CGD HEM . . . C 3 44.116 24.434 19.872 1 0 ? CGD HEM 200 A 1 HETATM 37 O O1D HEM . . . C 3 44.663 23.449 19.5 1 0 ? O1D HEM 200 A 1 HETATM 38 O O2D HEM . . . C 3 44.448 24.936 20.929 1 0 ? O2D HEM 200 A 1 HETATM 39 N NA HEM . . . C 3 41.947 30.718 16.642 1 0 ? NA HEM 200 A 1 HETATM 40 N NB HEM . . . C 3 39.783 31.595 15.045 1 0 ? NB HEM 200 A 1 HETATM 41 N NC HEM . . . C 3 39.101 28.911 14.482 1 0 ? NC HEM 200 A 1 HETATM 42 N ND HEM . . . C 3 41.258 28.027 16.078 1 0 ? ND HEM 200 A 1 HETATM 43 FE FE HEM . . . C 3 40.547 29.813 15.525 1 0 ? FE HEM 200 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #